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KJC3_004810-T1, KJC3_004810-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004810-T1
Unique NameKJC3_004810-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:775520..777028-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004810-T1 ID=KJC3_004810-T1|Name=KJC3_004810-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1509bp|location=Sequence derived from alignment at ch4:775520..777028- (Aspergillus niger KJC3)
CTTATCATCAAAACAATCAGTCGCTGCCCCATTCACATTCACTCAACCCC
GACTCCTGCCTGCCCCTCCCCTGCGACCATGATCCTGTCGGGGCCCTCTT
TGTAATCCGTCATCAGAGATCCCATAGTCACCGATGTGGTAGGGCACGCG
TATCTTCATTTCGCATTTCATTCAACTACAGGTAAGTCCAACAGCAATTT
TCCTATTTCAGGTAAGTCATCATACCCTTCCCCCCCTTTGTCCATCGTCG
TGACAAGATGCCATACTAAGACCATGTAGTGCTATTTCCACCCAAGCGTT
TACTCTCCCCCGCCTTCAATATAAACCAATGGCGTCCCCCGCCCCTCCTT
CTACCCCGAAAGCTGCATCTGCACCTGCAGCAACACCCGATGGCTCTCAG
ACGCCTGGAAAGTGGCGTCATCCTCATCTGAACGAGGTCGTCCGTCGACA
GAATGCTGGTACATTCGGAGATCGCAATATAAATAAGCTTGTGTGGAACA
CGGCCGCTTTGTTCGCGACCTGGGTGTTTGGAGATACCGTCAAGTCATAG
TGAGTGCTGCTAGCAGACACATCAAGTGCGTGGTTCCAGGGGGCCTCCTA
ACCAGCGTCGCAACAGTTCGCTTTGGCTTCAGAACATCAGTCCGATCTCT
ACATATCCCGATCTTTCATTGCTAGTCCTACGAGTCATCTTTGCTCTGAA
CATCCTGATTGCATTGTACCCTCTCTTTCGTCCGAAAGACAATTTCTCCG
ATATTCCATTGACCCCTACACAACGCTCGCTTTTGGGACTGGATCCCTCC
GCCACACAGTCACTGACCCCGGGCACGACGTACGTTACTCCGCCCAGGTA
CCGACTTTCTGCGTCTCGGAACGCCAGCCCAGCCAGCAGATCCGGTTCGC
CCTTGTCAGCAAGTGCTGGCGCTTCCGGGCACAGGCTATCGTCAGGACCT
TCATTTTCGCCTTCTCCGAGCCCGTTGTTGCACAAAGTGGTCACGAATGG
GAGCAAGGAGAGCGGGCGGAGGCCGAGCTTCGGATCTTCGTCTCCGCTCG
GGCGCAGCTCATCCTTCTCGCCCTTCAAAGAATCTTCCTTTAAGGAGTCT
ACGTTCAAAGACTCTACATCCACGTTCAGGGAGTCGACTATGTCGACATT
TTCCGGCATGTCCAGCATTGCGCCTGCAACTCCTTCACCAGTAGGTGGCA
AGCGTGTGAGCCTGGGTTTGAGCAACAAGTGGCTGTATGAGCGGAGCCGG
CGTCTGTCAGCAAGCAACGGTAGCCTCTGATTTGGACCACATTATTGGTC
TTGTTTTGGGTCTCAGGGAAGAATAAGAGACGATTCATGTAAACTCGTGT
TTTCTACTAGCGGGGTGCTTCGGAACTACCTTTAGGCCGTATTTTGTTAT
GATGCTGCATGTTGCATGATGTACTTTTAGAGAGGGTCCGATTCCTAAGA
ATAATTTTCGAATAATCTCCGAGACTGCGACTTGATCGCCGTGTACTTTA
AAATAGGAG
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Coding sequence (CDS) from alignment at ch4:775520..777028-

>KJC3_004810-T1 ID=KJC3_004810-T1|Name=KJC3_004810-T1|organism=Aspergillus niger KJC3|type=CDS|length=1770bp|location=Sequence derived from alignment at ch4:775520..777028- (Aspergillus niger KJC3)
TTCGCTTTGGCTTCAGAACATCAGTCCGATCTCTACATATCCCGATCTTT
CATTGCTAGTCCTACGAGTCATCTTTGCTCTGAACATCCTGATTGCATTG
TACCCTCTCTTTCGTCCGAAAGACAATTTCTCCGATATTCCATTGACCCC
TACACAACGCTCGCTTTTGGGACTGGATCCCTCCGCCACACAGTCACTGA
CCCCGGGCACGACGTACGTTACTCCGCCCAGGTACCGACTTTCTGCGTCT
CGGAACGCCAGCCCAGCCAGCAGATCCGGTTCGCCCTTGTCAGCAAGTGC
TGGCGCTTCCGGGCACAGGCTATCGTCAGGACCTTCATTTTCGCCTTCTC
CGAGCCCGTTGTTGCACAAAGTGGTCACGAATGGGAGCAAGGAGAGCGGG
CGGAGGCCGAGCTTCGGATCTTCGTCTCCGCTCGGGCGCAGCTCATCCTT
CTCGCCCTTCAAAGAATCTTCCTTTAAGGAGTCTACGTTCAAAGACTCTA
CATCCACGTTCAGGGAGTCGACTATGTCGACATTTTCCGGCATGTCCAGC
ATTGCGCCTGCAACTCCTTCACCAGTAGGTGGCAAGCGTGTGAGCCTGGG
TTTGAGCAACAAGTGGCTGTATGAGCGGAGCCGGCGTCTGTCAGCAAGCA
ACGGTAGCCTCTGAATGGCGTCCCCCGCCCCTCCTTCTACCCCGAAAGCT
GCATCTGCACCTGCAGCAACACCCGATGGCTCTCAGACGCCTGGAAAGTG
GCGTCATCCTCATCTGAACGAGGTCGTCCGTCGACAGAATGCTGGTACAT
TCGGAGATCGCAATATAAATAAGCTTGTGTGGAACACGGCCGCTTTGTTC
GCGACCTGGGTGTTTGGAGATACCGTCAAGTCATATTCGCTTTGGCTTCA
GAACATCAGTCCGATCTCTACATATCCCGATCTTTCATTGCTAGTCCTAC
GAGTCATCTTTGCTCTGAACATCCTGATTGCATTGTACCCTCTCTTTCGT
CCGAAAGACAATTTCTCCGATATTCCATTGACCCCTACACAACGCTCGCT
TTTGGGACTGGATCCCTCCGCCACACAGTCACTGACCCCGGGCACGACGT
ACGTTACTCCGCCCAGGTACCGACTTTCTGCGTCTCGGAACGCCAGCCCA
GCCAGCAGATCCGGTTCGCCCTTGTCAGCAAGTGCTGGCGCTTCCGGGCA
CAGGCTATCGTCAGGACCTTCATTTTCGCCTTCTCCGAGCCCGTTGTTGC
ACAAAGTGGTCACGAATGGGAGCAAGGAGAGCGGGCGGAGGCCGAGCTTC
GGATCTTCGTCTCCGCTCGGGCGCAGCTCATCCTTCTCGCCCTTCAAAGA
ATCTTCCTTTAAGGAGTCTACGTTCAAAGACTCTACATCCACGTTCAGGG
AGTCGACTATGTCGACATTTTCCGGCATGTCCAGCATTGCGCCTGCAACT
CCTTCACCAGTAGGTGGCAAGCGTGTGAGCCTGGGTTTGAGCAACAAGTG
GCTGTATGAGCGGAGCCGGCGTCTGTCAGCAAGCAACGGTAGCCTCTGAA
TGGCGTCCCCCGCCCCTCCTTCTACCCCGAAAGCTGCATCTGCACCTGCA
GCAACACCCGATGGCTCTCAGACGCCTGGAAAGTGGCGTCATCCTCATCT
GAACGAGGTCGTCCGTCGACAGAATGCTGGTACATTCGGAGATCGCAATA
TAAATAAGCTTGTGTGGAACACGGCCGCTTTGTTCGCGACCTGGGTGTTT
GGAGATACCGTCAAGTCATA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004810KJC3_004810Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004810-T1KJC3_004810-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004810-T1.cdsKJC3_004810-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004810-T1.utr3p1KJC3_004810-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004810-T1.exon3KJC3_004810-T1.exon3Aspergillus niger KJC3exon
KJC3_004810-T1.exon2KJC3_004810-T1.exon2Aspergillus niger KJC3exon
KJC3_004810-T1.exon1KJC3_004810-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004810-T1.utr5p2KJC3_004810-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_004810-T1.utr5p1KJC3_004810-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR012578
DBxrefPFAM:PF08058
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:775520..777028 -
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