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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:956303..957900+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004872-T1 ID=KJC3_004872-T1|Name=KJC3_004872-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1598bp|location=Sequence derived from alignment at ch4:956303..957900+ (Aspergillus niger KJC3)
ATGGCTACACTCCAGAAACTCCCATTCTTCGTCCGCCAGTCCTCACGGAC
TCTGGCTCGGTGCAGGAAACCCCTCATCCAGCCCCCCGCACTACGCACTC
TAGTGATGAAGCACCCAAAGGACTTTGTCCCTCCCACAGAGGAGGACCTG
CTAGAGCTTCGCGAGCGTGTACAGGAATTTACACGTGTGTATAATGGCAT
GCGAAATGCTCTGATCGGGTCATACTAACCGTCTGTGAATCAAGGGCGCG
AAATTCCCGAAGAAGTTGCCGCGCAGACCGACGCCCAGAATGAGTTTCCG
GCGGAGATGTGGAAGAAGCTGGGTGAAGCTGGGTGGGTTCTCAGAATATC
AACGAGCTATATACTTCAATTCTGACCTTATCAGGTTCCTTGGTATCACA
GCCAACGAAGAGTACGGTGGGCTAGGGATGGGATACCAGGCTCACTGCGT
TGTCATGGAGGAGATCAGTCGCGCGTCTGGTATAATTTTCCTTTATTAAT
TAGCTGACCAAGGATAGTCTAACCTTTCTCAAATAGGAAGCATCGCCCTC
TCCTACGCCGCACACTCCCAGCTCTGTGTCAACCAGCTCTCCCTAAATGG
AACCCCCGAGCAGAAGGAGCGATTCCTTCCTGGTCTCCTATCAGGTGAGA
AGGTCGGCGCTCTAGCGATGTCTGAGCACTCTGCGGGATCAGATGTGGTC
AGCATGAAGACAACAGCCAAGGCTGTTGATGGTGGATTCCTATTGAACGG
GACCAAGATGTGGATTACCAACGTGAGCTTGCATTGCCCCCTTTTCATTT
ATCACGAGACACCAGAACTAAGCAATCCTCCAAACGACAAAGGGCCCTGA
TGCAGACTACATCGTCGTCTACGCAAAGACCGAACCTGAGAAAGCCTCCA
AGGGAATCACAGCCTTCGTAGTAGAAAAGACATTCAAGGGATTCTCCTGC
GCCCGCAAACTAGACAAACTAGGCATGCGCGGATCCAACACCGGCGAACT
TGTTTTCGAAGATGTTTTCGTACCGAAAGAGAATGTTCTCGGGGAAGTCA
ACCGCGGCGTCAAGGTTCTAATGGAGGGTTTGGACCTAGAGCGTCTTGTT
CTCAGCGCTGGTCCGTTGGGGTACGTCCTTCAATTCGTCTTGTCTTCCAT
ACAACTCCCACCAACATTGCTGACACATAACAGTATCATGCAAGCTGCCC
TCGACCTCGTCCTCCCTTACACCCACGTCCGCAAGCAATTTGGCATGCCG
ATCGCCCACAACCAGCTGATCCAGGGTAAGCTGGCAGACATGTACACCAA
GCTTGCTGCCTCCCGCGCCTACACGTACGCCACGGCGCGACAGATCGATA
ACTCGGCTGCAGAGGGATCTGGGGCTCTGATCCGGACGCAGGACTGTGCC
GGCGCGATCCTCTATGCAGCGGAACGGGCAACGGAGTGTGCGCTTGATGC
GATCCAGTTGATGGGTGGAAATGGGTACATCAATGAGATTCCTGCGGGAC
GGTTACTGCGCGATGCGAAGCTGTATGAGATTGGGGCTGGAACGAGTGAG
ATTAGACGCATGGTGATTGGGCGTGCGTTTAATCGGGAATTTGCATAG back to topCoding sequence (CDS) from alignment at ch4:956303..957900+ >KJC3_004872-T1 ID=KJC3_004872-T1|Name=KJC3_004872-T1|organism=Aspergillus niger KJC3|type=CDS|length=7776bp|location=Sequence derived from alignment at ch4:956303..957900+ (Aspergillus niger KJC3)
ATGGCTACACTCCAGAAACTCCCATTCTTCGTCCGCCAGTCCTCACGGAC
TCTGGCTCGGTGCAGGAAACCCCTCATCCAGCCCCCCGCACTACGCACTC
TAGTGATGAAGCACCCAAAGGACTTTGTCCCTCCCACAGAGGAGGACCTG
CTAGAGCTTCGCGAGCGTGTACAGGAATTTACACGGCGCGAAATTCCCGA
AGAAGTTGCCGCGCAGACCGACGCCCAGAATGAGTTTCCGGCGGAGATGT
GGAAGAAGCTGGGTGAAGCTGGGTTCCTTGGTATCACAGCCAACGAAGAG
TACGGTGGGCTAGGGATGGGATACCAGGCTCACTGCGTTGTCATGGAGGA
GATCAGTCGCGCGTCTGGAAGCATCGCCCTCTCCTACGCCGCACACTCCC
AGCTCTGTGTCAACCAGCTCTCCCTAAATGGAACCCCCGAGCAGAAGGAG
CGATTCCTTCCTGGTCTCCTATCAGGTGAGAAGGTCGGCGCTCTAGCGAT
GTCTGAGCACTCTGCGGGATCAGATGTGGTCAGCATGAAGACAACAGCCA
AGGCTGTTGATGGTGGATTCCTATTGAACGGGACCAAGATGTGGATTACC
AACGGCCCTGATGCAGACTACATCGTCGTCTACGCAAAGACCGAACCTGA
GAAAGCCTCCAAGGGAATCACAGCCTTCGTAGTAGAAAAGACATTCAAGG
GATTCTCCTGCGCCCGCAAACTAGACAAACTAGGCATGCGCGGATCCAAC
ACCGGCGAACTTGTTTTCGAAGATGTTTTCGTACCGAAAGAGAATGTTCT
CGGGGAAGTCAACCGCGGCGTCAAGGTTCTAATGGAGGGTTTGGACCTAG
AGCGTCTTGTTCTCAGCGCTGGTCCGTTGGGTATCATGCAAGCTGCCCTC
GACCTCGTCCTCCCTTACACCCACGTCCGCAAGCAATTTGGCATGCCGAT
CGCCCACAACCAGCTGATCCAGGGTAAGCTGGCAGACATGTACACCAAGC
TTGCTGCCTCCCGCGCCTACACGTACGCCACGGCGCGACAGATCGATAAC
TCGGCTGCAGAGGGATCTGGGGCTCTGATCCGGACGCAGGACTGTGCCGG
CGCGATCCTCTATGCAGCGGAACGGGCAACGGAGTGTGCGCTTGATGCGA
TCCAGTTGATGGGTGGAAATGGGTACATCAATGAGATTCCTGCGGGACGG
TTACTGCGCGATGCGAAGCTGTATGAGATTGGGGCTGGAACGAGTGAGAT
TAGACGCATGGTGATTGGGCGTGCGTTTAATCGGGAATTTGCATAGATGG
CTACACTCCAGAAACTCCCATTCTTCGTCCGCCAGTCCTCACGGACTCTG
GCTCGGTGCAGGAAACCCCTCATCCAGCCCCCCGCACTACGCACTCTAGT
GATGAAGCACCCAAAGGACTTTGTCCCTCCCACAGAGGAGGACCTGCTAG
AGCTTCGCGAGCGTGTACAGGAATTTACACGGCGCGAAATTCCCGAAGAA
GTTGCCGCGCAGACCGACGCCCAGAATGAGTTTCCGGCGGAGATGTGGAA
GAAGCTGGGTGAAGCTGGGTTCCTTGGTATCACAGCCAACGAAGAGTACG
GTGGGCTAGGGATGGGATACCAGGCTCACTGCGTTGTCATGGAGGAGATC
AGTCGCGCGTCTGGAAGCATCGCCCTCTCCTACGCCGCACACTCCCAGCT
CTGTGTCAACCAGCTCTCCCTAAATGGAACCCCCGAGCAGAAGGAGCGAT
TCCTTCCTGGTCTCCTATCAGGTGAGAAGGTCGGCGCTCTAGCGATGTCT
GAGCACTCTGCGGGATCAGATGTGGTCAGCATGAAGACAACAGCCAAGGC
TGTTGATGGTGGATTCCTATTGAACGGGACCAAGATGTGGATTACCAACG
GCCCTGATGCAGACTACATCGTCGTCTACGCAAAGACCGAACCTGAGAAA
GCCTCCAAGGGAATCACAGCCTTCGTAGTAGAAAAGACATTCAAGGGATT
CTCCTGCGCCCGCAAACTAGACAAACTAGGCATGCGCGGATCCAACACCG
GCGAACTTGTTTTCGAAGATGTTTTCGTACCGAAAGAGAATGTTCTCGGG
GAAGTCAACCGCGGCGTCAAGGTTCTAATGGAGGGTTTGGACCTAGAGCG
TCTTGTTCTCAGCGCTGGTCCGTTGGGTATCATGCAAGCTGCCCTCGACC
TCGTCCTCCCTTACACCCACGTCCGCAAGCAATTTGGCATGCCGATCGCC
CACAACCAGCTGATCCAGGGTAAGCTGGCAGACATGTACACCAAGCTTGC
TGCCTCCCGCGCCTACACGTACGCCACGGCGCGACAGATCGATAACTCGG
CTGCAGAGGGATCTGGGGCTCTGATCCGGACGCAGGACTGTGCCGGCGCG
ATCCTCTATGCAGCGGAACGGGCAACGGAGTGTGCGCTTGATGCGATCCA
GTTGATGGGTGGAAATGGGTACATCAATGAGATTCCTGCGGGACGGTTAC
TGCGCGATGCGAAGCTGTATGAGATTGGGGCTGGAACGAGTGAGATTAGA
CGCATGGTGATTGGGCGTGCGTTTAATCGGGAATTTGCATAGATGGCTAC
ACTCCAGAAACTCCCATTCTTCGTCCGCCAGTCCTCACGGACTCTGGCTC
GGTGCAGGAAACCCCTCATCCAGCCCCCCGCACTACGCACTCTAGTGATG
AAGCACCCAAAGGACTTTGTCCCTCCCACAGAGGAGGACCTGCTAGAGCT
TCGCGAGCGTGTACAGGAATTTACACGGCGCGAAATTCCCGAAGAAGTTG
CCGCGCAGACCGACGCCCAGAATGAGTTTCCGGCGGAGATGTGGAAGAAG
CTGGGTGAAGCTGGGTTCCTTGGTATCACAGCCAACGAAGAGTACGGTGG
GCTAGGGATGGGATACCAGGCTCACTGCGTTGTCATGGAGGAGATCAGTC
GCGCGTCTGGAAGCATCGCCCTCTCCTACGCCGCACACTCCCAGCTCTGT
GTCAACCAGCTCTCCCTAAATGGAACCCCCGAGCAGAAGGAGCGATTCCT
TCCTGGTCTCCTATCAGGTGAGAAGGTCGGCGCTCTAGCGATGTCTGAGC
ACTCTGCGGGATCAGATGTGGTCAGCATGAAGACAACAGCCAAGGCTGTT
GATGGTGGATTCCTATTGAACGGGACCAAGATGTGGATTACCAACGGCCC
TGATGCAGACTACATCGTCGTCTACGCAAAGACCGAACCTGAGAAAGCCT
CCAAGGGAATCACAGCCTTCGTAGTAGAAAAGACATTCAAGGGATTCTCC
TGCGCCCGCAAACTAGACAAACTAGGCATGCGCGGATCCAACACCGGCGA
ACTTGTTTTCGAAGATGTTTTCGTACCGAAAGAGAATGTTCTCGGGGAAG
TCAACCGCGGCGTCAAGGTTCTAATGGAGGGTTTGGACCTAGAGCGTCTT
GTTCTCAGCGCTGGTCCGTTGGGTATCATGCAAGCTGCCCTCGACCTCGT
CCTCCCTTACACCCACGTCCGCAAGCAATTTGGCATGCCGATCGCCCACA
ACCAGCTGATCCAGGGTAAGCTGGCAGACATGTACACCAAGCTTGCTGCC
TCCCGCGCCTACACGTACGCCACGGCGCGACAGATCGATAACTCGGCTGC
AGAGGGATCTGGGGCTCTGATCCGGACGCAGGACTGTGCCGGCGCGATCC
TCTATGCAGCGGAACGGGCAACGGAGTGTGCGCTTGATGCGATCCAGTTG
ATGGGTGGAAATGGGTACATCAATGAGATTCCTGCGGGACGGTTACTGCG
CGATGCGAAGCTGTATGAGATTGGGGCTGGAACGAGTGAGATTAGACGCA
TGGTGATTGGGCGTGCGTTTAATCGGGAATTTGCATAGATGGCTACACTC
CAGAAACTCCCATTCTTCGTCCGCCAGTCCTCACGGACTCTGGCTCGGTG
CAGGAAACCCCTCATCCAGCCCCCCGCACTACGCACTCTAGTGATGAAGC
ACCCAAAGGACTTTGTCCCTCCCACAGAGGAGGACCTGCTAGAGCTTCGC
GAGCGTGTACAGGAATTTACACGGCGCGAAATTCCCGAAGAAGTTGCCGC
GCAGACCGACGCCCAGAATGAGTTTCCGGCGGAGATGTGGAAGAAGCTGG
GTGAAGCTGGGTTCCTTGGTATCACAGCCAACGAAGAGTACGGTGGGCTA
GGGATGGGATACCAGGCTCACTGCGTTGTCATGGAGGAGATCAGTCGCGC
GTCTGGAAGCATCGCCCTCTCCTACGCCGCACACTCCCAGCTCTGTGTCA
ACCAGCTCTCCCTAAATGGAACCCCCGAGCAGAAGGAGCGATTCCTTCCT
GGTCTCCTATCAGGTGAGAAGGTCGGCGCTCTAGCGATGTCTGAGCACTC
TGCGGGATCAGATGTGGTCAGCATGAAGACAACAGCCAAGGCTGTTGATG
GTGGATTCCTATTGAACGGGACCAAGATGTGGATTACCAACGGCCCTGAT
GCAGACTACATCGTCGTCTACGCAAAGACCGAACCTGAGAAAGCCTCCAA
GGGAATCACAGCCTTCGTAGTAGAAAAGACATTCAAGGGATTCTCCTGCG
CCCGCAAACTAGACAAACTAGGCATGCGCGGATCCAACACCGGCGAACTT
GTTTTCGAAGATGTTTTCGTACCGAAAGAGAATGTTCTCGGGGAAGTCAA
CCGCGGCGTCAAGGTTCTAATGGAGGGTTTGGACCTAGAGCGTCTTGTTC
TCAGCGCTGGTCCGTTGGGTATCATGCAAGCTGCCCTCGACCTCGTCCTC
CCTTACACCCACGTCCGCAAGCAATTTGGCATGCCGATCGCCCACAACCA
GCTGATCCAGGGTAAGCTGGCAGACATGTACACCAAGCTTGCTGCCTCCC
GCGCCTACACGTACGCCACGGCGCGACAGATCGATAACTCGGCTGCAGAG
GGATCTGGGGCTCTGATCCGGACGCAGGACTGTGCCGGCGCGATCCTCTA
TGCAGCGGAACGGGCAACGGAGTGTGCGCTTGATGCGATCCAGTTGATGG
GTGGAAATGGGTACATCAATGAGATTCCTGCGGGACGGTTACTGCGCGAT
GCGAAGCTGTATGAGATTGGGGCTGGAACGAGTGAGATTAGACGCATGGT
GATTGGGCGTGCGTTTAATCGGGAATTTGCATAGATGGCTACACTCCAGA
AACTCCCATTCTTCGTCCGCCAGTCCTCACGGACTCTGGCTCGGTGCAGG
AAACCCCTCATCCAGCCCCCCGCACTACGCACTCTAGTGATGAAGCACCC
AAAGGACTTTGTCCCTCCCACAGAGGAGGACCTGCTAGAGCTTCGCGAGC
GTGTACAGGAATTTACACGGCGCGAAATTCCCGAAGAAGTTGCCGCGCAG
ACCGACGCCCAGAATGAGTTTCCGGCGGAGATGTGGAAGAAGCTGGGTGA
AGCTGGGTTCCTTGGTATCACAGCCAACGAAGAGTACGGTGGGCTAGGGA
TGGGATACCAGGCTCACTGCGTTGTCATGGAGGAGATCAGTCGCGCGTCT
GGAAGCATCGCCCTCTCCTACGCCGCACACTCCCAGCTCTGTGTCAACCA
GCTCTCCCTAAATGGAACCCCCGAGCAGAAGGAGCGATTCCTTCCTGGTC
TCCTATCAGGTGAGAAGGTCGGCGCTCTAGCGATGTCTGAGCACTCTGCG
GGATCAGATGTGGTCAGCATGAAGACAACAGCCAAGGCTGTTGATGGTGG
ATTCCTATTGAACGGGACCAAGATGTGGATTACCAACGGCCCTGATGCAG
ACTACATCGTCGTCTACGCAAAGACCGAACCTGAGAAAGCCTCCAAGGGA
ATCACAGCCTTCGTAGTAGAAAAGACATTCAAGGGATTCTCCTGCGCCCG
CAAACTAGACAAACTAGGCATGCGCGGATCCAACACCGGCGAACTTGTTT
TCGAAGATGTTTTCGTACCGAAAGAGAATGTTCTCGGGGAAGTCAACCGC
GGCGTCAAGGTTCTAATGGAGGGTTTGGACCTAGAGCGTCTTGTTCTCAG
CGCTGGTCCGTTGGGTATCATGCAAGCTGCCCTCGACCTCGTCCTCCCTT
ACACCCACGTCCGCAAGCAATTTGGCATGCCGATCGCCCACAACCAGCTG
ATCCAGGGTAAGCTGGCAGACATGTACACCAAGCTTGCTGCCTCCCGCGC
CTACACGTACGCCACGGCGCGACAGATCGATAACTCGGCTGCAGAGGGAT
CTGGGGCTCTGATCCGGACGCAGGACTGTGCCGGCGCGATCCTCTATGCA
GCGGAACGGGCAACGGAGTGTGCGCTTGATGCGATCCAGTTGATGGGTGG
AAATGGGTACATCAATGAGATTCCTGCGGGACGGTTACTGCGCGATGCGA
AGCTGTATGAGATTGGGGCTGGAACGAGTGAGATTAGACGCATGGTGATT
GGGCGTGCGTTTAATCGGGAATTTGCATAGATGGCTACACTCCAGAAACT
CCCATTCTTCGTCCGCCAGTCCTCACGGACTCTGGCTCGGTGCAGGAAAC
CCCTCATCCAGCCCCCCGCACTACGCACTCTAGTGATGAAGCACCCAAAG
GACTTTGTCCCTCCCACAGAGGAGGACCTGCTAGAGCTTCGCGAGCGTGT
ACAGGAATTTACACGGCGCGAAATTCCCGAAGAAGTTGCCGCGCAGACCG
ACGCCCAGAATGAGTTTCCGGCGGAGATGTGGAAGAAGCTGGGTGAAGCT
GGGTTCCTTGGTATCACAGCCAACGAAGAGTACGGTGGGCTAGGGATGGG
ATACCAGGCTCACTGCGTTGTCATGGAGGAGATCAGTCGCGCGTCTGGAA
GCATCGCCCTCTCCTACGCCGCACACTCCCAGCTCTGTGTCAACCAGCTC
TCCCTAAATGGAACCCCCGAGCAGAAGGAGCGATTCCTTCCTGGTCTCCT
ATCAGGTGAGAAGGTCGGCGCTCTAGCGATGTCTGAGCACTCTGCGGGAT
CAGATGTGGTCAGCATGAAGACAACAGCCAAGGCTGTTGATGGTGGATTC
CTATTGAACGGGACCAAGATGTGGATTACCAACGGCCCTGATGCAGACTA
CATCGTCGTCTACGCAAAGACCGAACCTGAGAAAGCCTCCAAGGGAATCA
CAGCCTTCGTAGTAGAAAAGACATTCAAGGGATTCTCCTGCGCCCGCAAA
CTAGACAAACTAGGCATGCGCGGATCCAACACCGGCGAACTTGTTTTCGA
AGATGTTTTCGTACCGAAAGAGAATGTTCTCGGGGAAGTCAACCGCGGCG
TCAAGGTTCTAATGGAGGGTTTGGACCTAGAGCGTCTTGTTCTCAGCGCT
GGTCCGTTGGGTATCATGCAAGCTGCCCTCGACCTCGTCCTCCCTTACAC
CCACGTCCGCAAGCAATTTGGCATGCCGATCGCCCACAACCAGCTGATCC
AGGGTAAGCTGGCAGACATGTACACCAAGCTTGCTGCCTCCCGCGCCTAC
ACGTACGCCACGGCGCGACAGATCGATAACTCGGCTGCAGAGGGATCTGG
GGCTCTGATCCGGACGCAGGACTGTGCCGGCGCGATCCTCTATGCAGCGG
AACGGGCAACGGAGTGTGCGCTTGATGCGATCCAGTTGATGGGTGGAAAT
GGGTACATCAATGAGATTCCTGCGGGACGGTTACTGCGCGATGCGAAGCT
GTATGAGATTGGGGCTGGAACGAGTGAGATTAGACGCATGGTGATTGGGC
GTGCGTTTAATCGGGAATTTGCATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003995 | acyl-CoA dehydrogenase activity |
| GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036250 |
| DBxref | InterPro:IPR009100 |
| DBxref | InterPro:IPR034183 |
| DBxref | InterPro:IPR006089 |
| DBxref | InterPro:IPR009075 |
| DBxref | InterPro:IPR037069 |
| DBxref | InterPro:IPR006091 |
| DBxref | InterPro:IPR013786 |
| DBxref | PFAM:PF02771 |
| DBxref | PFAM:PF02770 |
| DBxref | PFAM:PF08028 |
| DBxref | PFAM:PF00441 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:956303..957900 + |
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