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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1049879..1053248- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004900-T1 ID=KJC3_004900-T1|Name=KJC3_004900-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3370bp|location=Sequence derived from alignment at ch4:1049879..1053248- (Aspergillus niger KJC3)
CAGCGATTGCGAATCCGTGGTTGGCCAACTGCCATTTCCACAGTTCTGAC
TAGTAGCATCTACTCACTACTTTCTTTCCCTTCTCTCTTCTTCTTTTCTG
TCTTGGTCTTACACTACTGCATTATTGTATATCAGACAACAATAATTTTG
GAGTTCACTGCTCCGGACAACTACCCACGGCTGAGTACTACAAGTGGGGA
TACTTCCTTGGGTGTGTTTCGGAACAAAACTGCTTGGAAATCCGTGTGCT
TCGGATTGGTTTCTGGTGCTTTTTCTTTTCCCCTCCGCGCATCTTGCGTC
ACACGTTCTCCGCCTCGGATTCTTGAAGATCGCTTCGTCTTCATCTCTCA
TCTTCACAATACTCAATCTATCTTCCCTTCTCTCCCCCCGCACGAGTGGA
ATCTCTGGCACTTGCTCTGATCCTTTCATCTCAATCTAACCCCCCTTCTC
CTGAAATCCACTGTCCATTGTTTGGTTCCATCAATCAGTGAGCACCATCC
CCTTCAAATATCGCCGTCTGTTCCCCCCTCCGGTTGGTCTGTCCTTTCGG
GCATCGGCCTGTCAATCGCTGTCAAATTCATCCCTTCCTTTTCTTTTTCT
TCCTTTCTTTTTTTCTTGTCTCCATCGTTGCCCCTCCCCCTTGCCTATCA
CGGGGTCGTTTTGCCCCTCTGGCATTATTTCTCTTTATCATCTACTGCTC
ATCTCGTCGGGTGCCTGAACGGCTTTTCACCCAACCACCCCACAGACTTT
TTTTTTTTTTTATCTTCTCAGAAAGTCTGCCTATTCATCCGCTTCTCTTA
TCCAAGTCCTCTTTTACTTGACCTTTCTGCCCTCACTGCAAGCCCACCCC
AAGAACCTTCTGCGGAGCTTCTTGGGACGTCTTGCGCTGTGCTAACCCCA
CATTTCCTCGGTCGGAAATAGCACTTCGCAGTCCATTGTTAATCTCACGT
ATCTGCAAGGGTTCAGGATGGGTCCCGCTGCGCGTTACCGACCCATGTCT
CCCAGCGGATCGCGTATGATCGATCCTATGCGGGCCTCCACCGGCACCGT
GCAGCTCAGTGCTTCCTACGATCCCTACCACCTCTCTGCCGGCCGTCCGC
CATACCCGGGTTACCATGCCGATGTCAACTACGCTTCTTCCTACGAACCT
CGCCTGGTGCGAGAACCCCGATTGGAAGCACAACCCATTTCTTCCACTAC
ATATCGAGACCCCGGCCATTCCACCAAGTTAAGGACGGAGTATGCCATCC
GCCCGCGAGTGCGGAGCAGCACCATGTCCGCGGTGGATCCTCGCTATTCC
TCCGGCCGTTATGACACACCCGCATCGCCCTTGTCCCGGGCTTCCCCTGT
CATTGTCCCCGGCCACCAGCGAACCCCTAGCCCGCGTCGAGACCATGACC
GTTACGTTGTACCGGCCTCCTCGCACCGACCCCACCGGCGGCATCATCTC
TCACACACTGATTATGCCAGCGATACTGGGCACTTAGACCCTCATGAGGG
AGCATCAAGGTCGCGAGTGCCTCATGGGGGATATCCGGTGTACGAGCACA
GCCCTCGTCTGCGGTATCCCCCAACTGGAGGTCTCCGGAAAGGCGAGGAT
ATTGACGACTACGATGCGTATTCATATACCAATGCATCGGAGCAGATGGA
GAAAGACTCACTTGCTAGGCTGCGCTATGAGCGAGGGGCTTATCCAAGGA
ACAGGCCACTTAGTCTGACCGGCCTTGACGACCCTCACTTGCTGCCTCGC
AAGGAGTCACGAGCTGTCGGGCCTCCTCCGTCTCAGAGAGGCTTTGACAA
ATTGGACCAAGGCAGCCGTGTGCGGCGTTCCACACACGGCTCCGCTGACA
GTGATGTAGATCTGGCGAGCGCCAGGCGGCGATCCTGGCAGAGGGCCCCC
GTATCCTTGCACCAGGATGTCGACGAAGGTTACTCTTCTTATAGAGATGA
GTACGACCCTGGTCACCATCGGCGACATCGGCGACATGATGACGATACGA
GTAGCCGGCACTCCTACGATGACCGTGCTTCAAGGCGAACCTCTGCTAAG
AGCGCTGTCGCAGCTTCGGGGTCGAGCACGGGCCTAGGGACTGCAGTACT
CGCCAGCGGTTACTCGGACGATTTTGACTATGATCTCTCCCCCCGGCCCG
ACCGCCATCGCTCCCGGGACCGGAGCGCTCGGGACCCGGAGTATAGAAGG
CATCACAGTCGGTCGCGCAGACCGTCTAGACGTCGCTCAGGAAGCGAGTC
TGATGAGCATACCTCGGATGAAGACCTGAAGAAATACCGACGCGAGCCAT
CGGCGCACAGGAAGCCTGATGGCTCGGACGTCTCAGCCAGTGGCAGCGAG
CGACTGTCCCCCTATTTGACAGTCGATCGCGCCCGTCGCCGGCGGTCTCA
CTCTCGTCATCGAAGCGAAGATTTGCCGCGCCTCAAAGAAGCAGATGCCA
GCCGCCCAGACGAGCTGAAGAAGTCTGAGCAGGCCACGTCGAAGGAGCAG
GACCCACCTGCACCCAAAGGCATCCTGAAGCCTCCCCGTGAGAAGTTTCC
GGAAGAGCCCAATCCCGTTCGAGAAGGCGTGGCCCCATTGAAAGATGCGC
ACAAGAAGGGCATCCCTCCGGGCGCCCGGTGGACGAAGATAGACCGACGA
CTTGTGAACCCTGCTGCCTTGGAGCTTGGCCGAGAGCGGTATGAGGAGCG
AGCGGAGTATGTGATCGTTCTGCGAGTCTTGACCAAGGAGGAAATTCAGG
CGTATGCGGTCAAGACGCAGGAAATTCGAGGTATGTTCCCAAAGATCCAT
GGCCCACAATGCATACTAATCAGGTGTGTAGATGCTCGCTGGCAAGAGAT
TATCAAGGAGCGCCGTCGACGTCGGGAGGAGGACCGTCGCCACGGGCGTA
GAGTGGACAGTTCCTCGAGCGACGATGAAGACGAGGATGACGAAAATGCG
ACTCCTCTTGCCATCGAGGGTGCGCCTGACGCTAAATCGGGGTCGAAGAC
CGCGACTGAACCCGTCAAAGCCGCAGCGTGATCATATTCTTCCTGCGCAA
TCTTTTTGTTCCATTATTTGTTTTTTGTTTATTTGGGTTATTTCAGTTTC
AATACCTCTATTGTTCACGTGATTACATGCTGGTCCAGATCACGAGCTGG
GAGGAATAGAATGAGTGTACAACAGCGGACCGGCGTTGCTCGGGATTGAA
GGAACAGGAATGTATGGATCAAGGCAGTGCCTATTAGACGCAACGACCTG
GATGCACGCGCAATCAAACATGTCAAGCAATTACAATTGGAAGCGTTTGA
ATTACAGCTGGTTCTACGGCATGTCGTGTACACAGTACAGAGTAAATAGT
GAGTAGTATGTGAGTGTGTG back to topCoding sequence (CDS) from alignment at ch4:1049879..1053248- >KJC3_004900-T1 ID=KJC3_004900-T1|Name=KJC3_004900-T1|organism=Aspergillus niger KJC3|type=CDS|length=4026bp|location=Sequence derived from alignment at ch4:1049879..1053248- (Aspergillus niger KJC3)
ATGCTCGCTGGCAAGAGATTATCAAGGAGCGCCGTCGACGTCGGGAGGAG
GACCGTCGCCACGGGCGTAGAGTGGACAGTTCCTCGAGCGACGATGAAGA
CGAGGATGACGAAAATGCGACTCCTCTTGCCATCGAGGGTGCGCCTGACG
CTAAATCGGGGTCGAAGACCGCGACTGAACCCGTCAAAGCCGCAGCGTGA
ATGGGTCCCGCTGCGCGTTACCGACCCATGTCTCCCAGCGGATCGCGTAT
GATCGATCCTATGCGGGCCTCCACCGGCACCGTGCAGCTCAGTGCTTCCT
ACGATCCCTACCACCTCTCTGCCGGCCGTCCGCCATACCCGGGTTACCAT
GCCGATGTCAACTACGCTTCTTCCTACGAACCTCGCCTGGTGCGAGAACC
CCGATTGGAAGCACAACCCATTTCTTCCACTACATATCGAGACCCCGGCC
ATTCCACCAAGTTAAGGACGGAGTATGCCATCCGCCCGCGAGTGCGGAGC
AGCACCATGTCCGCGGTGGATCCTCGCTATTCCTCCGGCCGTTATGACAC
ACCCGCATCGCCCTTGTCCCGGGCTTCCCCTGTCATTGTCCCCGGCCACC
AGCGAACCCCTAGCCCGCGTCGAGACCATGACCGTTACGTTGTACCGGCC
TCCTCGCACCGACCCCACCGGCGGCATCATCTCTCACACACTGATTATGC
CAGCGATACTGGGCACTTAGACCCTCATGAGGGAGCATCAAGGTCGCGAG
TGCCTCATGGGGGATATCCGGTGTACGAGCACAGCCCTCGTCTGCGGTAT
CCCCCAACTGGAGGTCTCCGGAAAGGCGAGGATATTGACGACTACGATGC
GTATTCATATACCAATGCATCGGAGCAGATGGAGAAAGACTCACTTGCTA
GGCTGCGCTATGAGCGAGGGGCTTATCCAAGGAACAGGCCACTTAGTCTG
ACCGGCCTTGACGACCCTCACTTGCTGCCTCGCAAGGAGTCACGAGCTGT
CGGGCCTCCTCCGTCTCAGAGAGGCTTTGACAAATTGGACCAAGGCAGCC
GTGTGCGGCGTTCCACACACGGCTCCGCTGACAGTGATGTAGATCTGGCG
AGCGCCAGGCGGCGATCCTGGCAGAGGGCCCCCGTATCCTTGCACCAGGA
TGTCGACGAAGGTTACTCTTCTTATAGAGATGAGTACGACCCTGGTCACC
ATCGGCGACATCGGCGACATGATGACGATACGAGTAGCCGGCACTCCTAC
GATGACCGTGCTTCAAGGCGAACCTCTGCTAAGAGCGCTGTCGCAGCTTC
GGGGTCGAGCACGGGCCTAGGGACTGCAGTACTCGCCAGCGGTTACTCGG
ACGATTTTGACTATGATCTCTCCCCCCGGCCCGACCGCCATCGCTCCCGG
GACCGGAGCGCTCGGGACCCGGAGTATAGAAGGCATCACAGTCGGTCGCG
CAGACCGTCTAGACGTCGCTCAGGAAGCGAGTCTGATGAGCATACCTCGG
ATGAAGACCTGAAGAAATACCGACGCGAGCCATCGGCGCACAGGAAGCCT
GATGGCTCGGACGTCTCAGCCAGTGGCAGCGAGCGACTGTCCCCCTATTT
GACAGTCGATCGCGCCCGTCGCCGGCGGTCTCACTCTCGTCATCGAAGCG
AAGATTTGCCGCGCCTCAAAGAAGCAGATGCCAGCCGCCCAGACGAGCTG
AAGAAGTCTGAGCAGGCCACGTCGAAGGAGCAGGACCCACCTGCACCCAA
AGGCATCCTGAAGCCTCCCCGTGAGAAGTTTCCGGAAGAGCCCAATCCCG
TTCGAGAAGGCGTGGCCCCATTGAAAGATGCGCACAAGAAGGGCATCCCT
CCGGGCGCCCGGTGGACGAAGATAGACCGACGACTTGTGAACCCTGCTGC
CTTGGAGCTTGGCCGAGAGCGGTATGAGGAGCGAGCGGAGTATGTGATCG
TTCTGCGAGTCTTGACCAAGGAGGAAATTCAGGCGTATGCGGTCAAGACG
CAGGAAATTCGAGATGCTCGCTGGCAAGAGATTATCAAGGAGCGCCGTCG
ACGTCGGGAGGAGGACCGTCGCCACGGGCGTAGAGTGGACAGTTCCTCGA
GCGACGATGAAGACGAGGATGACGAAAATGCGACTCCTCTTGCCATCGAG
GGTGCGCCTGACGCTAAATCGGGGTCGAAGACCGCGACTGAACCCGTCAA
AGCCGCAGCGTGAATGGGTCCCGCTGCGCGTTACCGACCCATGTCTCCCA
GCGGATCGCGTATGATCGATCCTATGCGGGCCTCCACCGGCACCGTGCAG
CTCAGTGCTTCCTACGATCCCTACCACCTCTCTGCCGGCCGTCCGCCATA
CCCGGGTTACCATGCCGATGTCAACTACGCTTCTTCCTACGAACCTCGCC
TGGTGCGAGAACCCCGATTGGAAGCACAACCCATTTCTTCCACTACATAT
CGAGACCCCGGCCATTCCACCAAGTTAAGGACGGAGTATGCCATCCGCCC
GCGAGTGCGGAGCAGCACCATGTCCGCGGTGGATCCTCGCTATTCCTCCG
GCCGTTATGACACACCCGCATCGCCCTTGTCCCGGGCTTCCCCTGTCATT
GTCCCCGGCCACCAGCGAACCCCTAGCCCGCGTCGAGACCATGACCGTTA
CGTTGTACCGGCCTCCTCGCACCGACCCCACCGGCGGCATCATCTCTCAC
ACACTGATTATGCCAGCGATACTGGGCACTTAGACCCTCATGAGGGAGCA
TCAAGGTCGCGAGTGCCTCATGGGGGATATCCGGTGTACGAGCACAGCCC
TCGTCTGCGGTATCCCCCAACTGGAGGTCTCCGGAAAGGCGAGGATATTG
ACGACTACGATGCGTATTCATATACCAATGCATCGGAGCAGATGGAGAAA
GACTCACTTGCTAGGCTGCGCTATGAGCGAGGGGCTTATCCAAGGAACAG
GCCACTTAGTCTGACCGGCCTTGACGACCCTCACTTGCTGCCTCGCAAGG
AGTCACGAGCTGTCGGGCCTCCTCCGTCTCAGAGAGGCTTTGACAAATTG
GACCAAGGCAGCCGTGTGCGGCGTTCCACACACGGCTCCGCTGACAGTGA
TGTAGATCTGGCGAGCGCCAGGCGGCGATCCTGGCAGAGGGCCCCCGTAT
CCTTGCACCAGGATGTCGACGAAGGTTACTCTTCTTATAGAGATGAGTAC
GACCCTGGTCACCATCGGCGACATCGGCGACATGATGACGATACGAGTAG
CCGGCACTCCTACGATGACCGTGCTTCAAGGCGAACCTCTGCTAAGAGCG
CTGTCGCAGCTTCGGGGTCGAGCACGGGCCTAGGGACTGCAGTACTCGCC
AGCGGTTACTCGGACGATTTTGACTATGATCTCTCCCCCCGGCCCGACCG
CCATCGCTCCCGGGACCGGAGCGCTCGGGACCCGGAGTATAGAAGGCATC
ACAGTCGGTCGCGCAGACCGTCTAGACGTCGCTCAGGAAGCGAGTCTGAT
GAGCATACCTCGGATGAAGACCTGAAGAAATACCGACGCGAGCCATCGGC
GCACAGGAAGCCTGATGGCTCGGACGTCTCAGCCAGTGGCAGCGAGCGAC
TGTCCCCCTATTTGACAGTCGATCGCGCCCGTCGCCGGCGGTCTCACTCT
CGTCATCGAAGCGAAGATTTGCCGCGCCTCAAAGAAGCAGATGCCAGCCG
CCCAGACGAGCTGAAGAAGTCTGAGCAGGCCACGTCGAAGGAGCAGGACC
CACCTGCACCCAAAGGCATCCTGAAGCCTCCCCGTGAGAAGTTTCCGGAA
GAGCCCAATCCCGTTCGAGAAGGCGTGGCCCCATTGAAAGATGCGCACAA
GAAGGGCATCCCTCCGGGCGCCCGGTGGACGAAGATAGACCGACGACTTG
TGAACCCTGCTGCCTTGGAGCTTGGCCGAGAGCGGTATGAGGAGCGAGCG
GAGTATGTGATCGTTCTGCGAGTCTTGACCAAGGAGGAAATTCAGGCGTA
TGCGGTCAAGACGCAGGAAATTCGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004900-T1.utr3p1 | KJC3_004900-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004900-T1.utr5p1 | KJC3_004900-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1049879..1053248 - |
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