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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1090056..1091988+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004909-T1 ID=KJC3_004909-T1|Name=KJC3_004909-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1933bp|location=Sequence derived from alignment at ch4:1090056..1091988+ (Aspergillus niger KJC3)
GAAATATTCGGAGAGAAGAATATCACGGGTTGCTATTTGGGACTCGATGA
GCCCATAGCTCATGCTGACTCGCAACTCATCTGTTTATGCCTCTATTGCA
TCCCGGCGATTCTTTGTATCTGTCCTTTGTCTTCCTACCCTTTACCCACT
CGACTAAGGCGGCCGCAATCGTGTTCTTTGTCAACCCCTCCTCCCCCCCG
TGTGTTGTCGCAGGATATCTGCTCGGCGGCTAGAGATGGCACCTTCTCTT
TCCTCTACATATTCGAATCGCCCTGTATCGCAAGGATCGCCATCCGATAA
GGAGAATCGCTCAAGTGCAACGGGGATCACTAAGAGAAACCAACCGCAAA
CGATGGCACATGCCCGTAGAGCTAAGCGAGCTCGACTATCAACAAGAGAC
TCTAATGTGCAAGCCACTCAGTCTCAAGTAGCATCGCAGACGACACGGAA
TAGTGCCAATCAGTTTTACGATCCGGATCAAGACCACCGAGAAAGGCGAC
AAGTTCGTAAGGGCCTGAGAGATTTGACGCGGGACCTCAACGGTAAGGCC
GACTCGAGCTCTTCAACTTGCCGCCGAGTCTGACATAATTTATGGTAGAC
TCTAGAAATGAATATCTACAGTCCGGAAATCAGGGCCTGCGTGACACCAT
CAAGAAAGCGAACGAGATCTTTGAGAATGTCAAGCAGACTTCTGACGCAA
CCATCGATTCACGGTTGCTTGTTCAAGCGGCAGATCTCTCATACAAAAAG
ACGGCACAGTTGGTGCTGGGAGACGCCAGTGCAGGAATAGATGTGGACGA
GTTTGTCTCGAAGTGTATCTCTTTTATGCGCCGGGCACCTGCGGATTCCC
AAGATTCGATGCCTTCCAGCACCCAACGGCGGCGGACGGGTATCGGAAGG
ACTCAAATGGACCCCAACGACAGCGACGAGGACCAAGGGGATGCGATGAA
CTGGGACTGGCTCGGACGCGCTGCTTGTTTCTGTAGTAATGCCCGACCAT
CAGTTCCTGGCTTCCTACTGGGACCGCTTTCGGTACAGAAGCGCGTCCGA
CAGCAACCTGTACGAAGAGCCCGTGAACGAATTGACCCAGCACGGGCCGT
TGCACCGCAAGAGCTGCAGGAAAAGGACCTGGACAGGCAAGAAACATCGA
ATTTGACTACTATGTGTGCCAGCATCAATCGGCTTTTGGCAAGAACCCAA
AACAACGGACAGGACGTGGTAGAGGCAGAATTGTCGCAGTTATCCGAGGA
GCCCGACGAAGATACGGTGCAAGAGGTGATGGCGAGGAACAATGTAGCCG
ATGATGGAGGTGTTCCTCTGTTCCAGTTCTGCATCAACCCAAATTCTTTC
GGACAAAGTGTAGAGAATCTATTCTACGTTAGCTTTTTGGTCCGGGATGG
CTTGGTTGGAATCGCAGTGGATAGCCGGGGCCTGCCCACTTTGCGTAAGT
CCTATTCAGTACCCTCGATGATGTGGGCATCTAATTGACCATCCTCAACC
AGATTCTGCAAAGCCTCATGCGCCTAGTGAAGCCCAGAGATTGGGCATCA
AGAAGCGTCAGGCCATTTTCACACTCGACTTTGAGACTTGGCAAGAATTG
GTCCAAGTCTATGACATCAAGGACCCCATCATTCCTCATCGGGAGGAAGA
GACGCAAAATACAGCACAATCCTGGCAAGGATAAGAGGAAATGATTTGAA
TGCGTTCTGAGAAGTGCGTTGTGTATTGATTCTATTTTGTGGTAGTGCTT
TGATCATGCGCCTGTGGATATCGTGATACCCATTTTGTGTTAACGGTGTT
GGTATGCATTTTGAGAATGAATGTTTGTCACGGCGTATGGGTGTCTTCAA
TGAATTAAATACAAGGCATGGTCCACAAATACAGAATCGCAGAGCTTGTC
CCCAAGGTTTTGCATCCAGCAGAGGGATAAACA back to topCoding sequence (CDS) from alignment at ch4:1090056..1091988+ >KJC3_004909-T1 ID=KJC3_004909-T1|Name=KJC3_004909-T1|organism=Aspergillus niger KJC3|type=CDS|length=4005bp|location=Sequence derived from alignment at ch4:1090056..1091988+ (Aspergillus niger KJC3)
ATGGCACCTTCTCTTTCCTCTACATATTCGAATCGCCCTGTATCGCAAGG
ATCGCCATCCGATAAGGAGAATCGCTCAAGTGCAACGGGGATCACTAAGA
GAAACCAACCGCAAACGATGGCACATGCCCGTAGAGCTAAGCGAGCTCGA
CTATCAACAAGAGACTCTAATGTGCAAGCCACTCAGTCTCAAGTAGCATC
GCAGACGACACGGAATAGTGCCAATCAGTTTTACGATCCGGATCAAGACC
ACCGAGAAAGGCGACAAGTTCGTAAGGGCCTGAGAGATTTGACGCGGGAC
CTCAACGACTCTAGAAATGAATATCTACAGTCCGGAAATCAGGGCCTGCG
TGACACCATCAAGAAAGCGAACGAGATCTTTGAGAATGTCAAGCAGACTT
CTGACGCAACCATCGATTCACGGTTGCTTGTTCAAGCGGCAGATCTCTCA
TACAAAAAGACGGCACAGTTGGTGCTGGGAGACGCCAGTGCAGGAATAGA
TGTGGACGAGTTTGTCTCGAAGTGTATCTCTTTTATGCGCCGGGCACCTG
CGGATTCCCAAGATTCGATGCCTTCCAGCACCCAACGGCGGCGGACGGGT
ATCGGAAGGACTCAAATGGACCCCAACGACAGCGACGAGGACCAAGGGGA
TGCGATGAACTGGGACTGGCTCGGACGCGCTGCTTGTTTCTGTAGTAATG
CCCGACCATCAGTTCCTGGCTTCCTACTGGGACCGCTTTCGGTACAGAAG
CGCGTCCGACAGCAACCTGTACGAAGAGCCCGTGAACGAATTGACCCAGC
ACGGGCCGTTGCACCGCAAGAGCTGCAGGAAAAGGACCTGGACAGGCAAG
AAACATCGAATTTGACTACTATGTGTGCCAGCATCAATCGGCTTTTGGCA
AGAACCCAAAACAACGGACAGGACGTGGTAGAGGCAGAATTGTCGCAGTT
ATCCGAGGAGCCCGACGAAGATACGGTGCAAGAGGTGATGGCGAGGAACA
ATGTAGCCGATGATGGAGGTGTTCCTCTGTTCCAGTTCTGCATCAACCCA
AATTCTTTCGGACAAAGTGTAGAGAATCTATTCTACGTTAGCTTTTTGGT
CCGGGATGGCTTGGTTGGAATCGCAGTGGATAGCCGGGGCCTGCCCACTT
TGCATTCTGCAAAGCCTCATGCGCCTAGTGAAGCCCAGAGATTGGGCATC
AAGAAGCGTCAGGCCATTTTCACACTCGACTTTGAGACTTGGCAAGAATT
GGTCCAAGTCTATGACATCAAGGACCCCATCATTCCTCATCGGGAGGAAG
AGACGCAAAATACAGCACAATCCTGGCAAGGATAAATGGCACCTTCTCTT
TCCTCTACATATTCGAATCGCCCTGTATCGCAAGGATCGCCATCCGATAA
GGAGAATCGCTCAAGTGCAACGGGGATCACTAAGAGAAACCAACCGCAAA
CGATGGCACATGCCCGTAGAGCTAAGCGAGCTCGACTATCAACAAGAGAC
TCTAATGTGCAAGCCACTCAGTCTCAAGTAGCATCGCAGACGACACGGAA
TAGTGCCAATCAGTTTTACGATCCGGATCAAGACCACCGAGAAAGGCGAC
AAGTTCGTAAGGGCCTGAGAGATTTGACGCGGGACCTCAACGACTCTAGA
AATGAATATCTACAGTCCGGAAATCAGGGCCTGCGTGACACCATCAAGAA
AGCGAACGAGATCTTTGAGAATGTCAAGCAGACTTCTGACGCAACCATCG
ATTCACGGTTGCTTGTTCAAGCGGCAGATCTCTCATACAAAAAGACGGCA
CAGTTGGTGCTGGGAGACGCCAGTGCAGGAATAGATGTGGACGAGTTTGT
CTCGAAGTGTATCTCTTTTATGCGCCGGGCACCTGCGGATTCCCAAGATT
CGATGCCTTCCAGCACCCAACGGCGGCGGACGGGTATCGGAAGGACTCAA
ATGGACCCCAACGACAGCGACGAGGACCAAGGGGATGCGATGAACTGGGA
CTGGCTCGGACGCGCTGCTTGTTTCTGTAGTAATGCCCGACCATCAGTTC
CTGGCTTCCTACTGGGACCGCTTTCGGTACAGAAGCGCGTCCGACAGCAA
CCTGTACGAAGAGCCCGTGAACGAATTGACCCAGCACGGGCCGTTGCACC
GCAAGAGCTGCAGGAAAAGGACCTGGACAGGCAAGAAACATCGAATTTGA
CTACTATGTGTGCCAGCATCAATCGGCTTTTGGCAAGAACCCAAAACAAC
GGACAGGACGTGGTAGAGGCAGAATTGTCGCAGTTATCCGAGGAGCCCGA
CGAAGATACGGTGCAAGAGGTGATGGCGAGGAACAATGTAGCCGATGATG
GAGGTGTTCCTCTGTTCCAGTTCTGCATCAACCCAAATTCTTTCGGACAA
AGTGTAGAGAATCTATTCTACGTTAGCTTTTTGGTCCGGGATGGCTTGGT
TGGAATCGCAGTGGATAGCCGGGGCCTGCCCACTTTGCATTCTGCAAAGC
CTCATGCGCCTAGTGAAGCCCAGAGATTGGGCATCAAGAAGCGTCAGGCC
ATTTTCACACTCGACTTTGAGACTTGGCAAGAATTGGTCCAAGTCTATGA
CATCAAGGACCCCATCATTCCTCATCGGGAGGAAGAGACGCAAAATACAG
CACAATCCTGGCAAGGATAAATGGCACCTTCTCTTTCCTCTACATATTCG
AATCGCCCTGTATCGCAAGGATCGCCATCCGATAAGGAGAATCGCTCAAG
TGCAACGGGGATCACTAAGAGAAACCAACCGCAAACGATGGCACATGCCC
GTAGAGCTAAGCGAGCTCGACTATCAACAAGAGACTCTAATGTGCAAGCC
ACTCAGTCTCAAGTAGCATCGCAGACGACACGGAATAGTGCCAATCAGTT
TTACGATCCGGATCAAGACCACCGAGAAAGGCGACAAGTTCGTAAGGGCC
TGAGAGATTTGACGCGGGACCTCAACGACTCTAGAAATGAATATCTACAG
TCCGGAAATCAGGGCCTGCGTGACACCATCAAGAAAGCGAACGAGATCTT
TGAGAATGTCAAGCAGACTTCTGACGCAACCATCGATTCACGGTTGCTTG
TTCAAGCGGCAGATCTCTCATACAAAAAGACGGCACAGTTGGTGCTGGGA
GACGCCAGTGCAGGAATAGATGTGGACGAGTTTGTCTCGAAGTGTATCTC
TTTTATGCGCCGGGCACCTGCGGATTCCCAAGATTCGATGCCTTCCAGCA
CCCAACGGCGGCGGACGGGTATCGGAAGGACTCAAATGGACCCCAACGAC
AGCGACGAGGACCAAGGGGATGCGATGAACTGGGACTGGCTCGGACGCGC
TGCTTGTTTCTGTAGTAATGCCCGACCATCAGTTCCTGGCTTCCTACTGG
GACCGCTTTCGGTACAGAAGCGCGTCCGACAGCAACCTGTACGAAGAGCC
CGTGAACGAATTGACCCAGCACGGGCCGTTGCACCGCAAGAGCTGCAGGA
AAAGGACCTGGACAGGCAAGAAACATCGAATTTGACTACTATGTGTGCCA
GCATCAATCGGCTTTTGGCAAGAACCCAAAACAACGGACAGGACGTGGTA
GAGGCAGAATTGTCGCAGTTATCCGAGGAGCCCGACGAAGATACGGTGCA
AGAGGTGATGGCGAGGAACAATGTAGCCGATGATGGAGGTGTTCCTCTGT
TCCAGTTCTGCATCAACCCAAATTCTTTCGGACAAAGTGTAGAGAATCTA
TTCTACGTTAGCTTTTTGGTCCGGGATGGCTTGGTTGGAATCGCAGTGGA
TAGCCGGGGCCTGCCCACTTTGCATTCTGCAAAGCCTCATGCGCCTAGTG
AAGCCCAGAGATTGGGCATCAAGAAGCGTCAGGCCATTTTCACACTCGAC
TTTGAGACTTGGCAAGAATTGGTCCAAGTCTATGACATCAAGGACCCCAT
CATTCCTCATCGGGAGGAAGAGACGCAAAATACAGCACAATCCTGGCAAG
GATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004909-T1.utr5p1 | KJC3_004909-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004909-T1.utr3p1 | KJC3_004909-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092634ZL |
| DBxref | InterPro:IPR029225 |
| DBxref | InterPro:IPR014854 |
| DBxref | PFAM:PF08743 |
| DBxref | PFAM:PF15412 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1090056..1091988 + |
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