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KJC3_004945-T1, KJC3_004945-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004945-T1
Unique NameKJC3_004945-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1186867..1187657-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004945-T1 ID=KJC3_004945-T1|Name=KJC3_004945-T1|organism=Aspergillus niger KJC3|type=mRNA|length=791bp|location=Sequence derived from alignment at ch4:1186867..1187657- (Aspergillus niger KJC3)
GCGTCGTTTTCCGCACTTAATCACTCTCCATTCCAGATTAAGTTTAGCCT
ATTCCCAAATAAACTCATCACCATCACCACAACTAATATCAATGTCTACT
TACACCAACCAACGATCCCATCAACTCCCAAAAAACCCCTACCTAATCCC
ATACCATCAACCCAAAAAATCCCAACGAAGATGCCCCCCACCCCTGGCGA
ATCCAACCTCCAAACCCTCCTGTCCTCCCTCTCACCAATCCTCCACCCGG
ACCTCTTCGTCTTCCTCACCATCCCCCACACCAGCATCTCCCAAGCAGGT
CCAGATCTCCACACTTTGCAACCCCAACTCCTCTTCCAGGAAGCAGAAGG
CACCACGTACATTGTGACTCGCGAGCGTGCCGAAGCGCACGGCTTCACCA
ACTATGTCTTCCCCTGTCGCATGATTACTATCAGCGTGCATTCTAGTCTT
GAGGCGGTGGGGCTGATGGCTGCTATTAGCGCCAGTCTCAAGGAGGCCGG
CGTGAGTGCGAATGTGGTCAGTGGGTTCTATCATGATCATGTTTTTGTTC
CCGAGGGGAAAGAGGAGGTTGCCTTGAGGGCGTTGCGGGAGTTGGCGGCA
GGGAATTTAACTGATTGATGAATTGGGTTTGTGTGTATAGGAGACGTTGT
TTGTAGTGGTTATTGATTGATTTAGTTTGTTGGCTATTACTGGAGTGGAT
GGTGAAATCGAAATCTCCATATTACGAGTATCCCGCAGGCTGCAAAGGTC
GCCACCCTTGCAGCCTAAGGCACAAGGCATCTTGATGCGGG
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Coding sequence (CDS) from alignment at ch4:1186867..1187657-

>KJC3_004945-T1 ID=KJC3_004945-T1|Name=KJC3_004945-T1|organism=Aspergillus niger KJC3|type=CDS|length=438bp|location=Sequence derived from alignment at ch4:1186867..1187657- (Aspergillus niger KJC3)
ATGCCCCCCACCCCTGGCGAATCCAACCTCCAAACCCTCCTGTCCTCCCT
CTCACCAATCCTCCACCCGGACCTCTTCGTCTTCCTCACCATCCCCCACA
CCAGCATCTCCCAAGCAGGTCCAGATCTCCACACTTTGCAACCCCAACTC
CTCTTCCAGGAAGCAGAAGGCACCACGTACATTGTGACTCGCGAGCGTGC
CGAAGCGCACGGCTTCACCAACTATGTCTTCCCCTGTCGCATGATTACTA
TCAGCGTGCATTCTAGTCTTGAGGCGGTGGGGCTGATGGCTGCTATTAGC
GCCAGTCTCAAGGAGGCCGGCGTGAGTGCGAATGTGGTCAGTGGGTTCTA
TCATGATCATGTTTTTGTTCCCGAGGGGAAAGAGGAGGTTGCCTTGAGGG
CGTTGCGGGAGTTGGCGGCAGGGAATTTAACTGATTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004945KJC3_004945Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004945-T1.cdsKJC3_004945-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004945-T1.utr3p1KJC3_004945-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004945-T1.exon1KJC3_004945-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004945-T1.utr5p1KJC3_004945-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004945-T1KJC3_004945-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR018717
DBxrefPFAM:PF13840
DBxrefPFAM:PF10000
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1186867..1187657 -
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