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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1504539..1506615- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005071-T1 ID=KJC3_005071-T1|Name=KJC3_005071-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2077bp|location=Sequence derived from alignment at ch4:1504539..1506615- (Aspergillus niger KJC3)
TTCCCCGATACCCTGGTTGGAAATTACACTGGTACCTGTTGCACTGTACC
ATGGTCACCGCTCCTTCTACCTCCGCGGCCCGGAAGGACACCACTTTGTC
CCGAAGGTATATTGAGGGCCTGATTTCAGAAGGCAAGCATGTCATCATCT
TCGACGGTCGCGTACTCAGAGTCGATGCTTGGATTCCCTACCATCCCGGA
GGAGACAAGTCCATCAGGCACATGGTTGGGAAAGATGCCACGGATGAGAT
CAACGCGTATGTGGCCCATGAACCCCGGGATGCCCGGATGCGAACAGACC
GTTGACTCCGACGTTTCTCTTCTACAGGTTACACTCCAAAGAAGCGCGCC
AACGAATGTTGTCCTTTCAGATCGGTCGCATCGAGGGCCCATGGGTGAAC
TTCCTGCCGCCCATCCAGGGCGGAAAGTTTCGTCCCTATACCGAGGATTG
TTTGTCCGATGAAGAGAGCTCTGGTCAAGAGAGTTCCGGTCAGGAAACGT
CACAGCCACCATCCCCGATCTTTGATGCCGTCGATAGCACGTCAGGTGCT
CGTCAGCGGAAACCTGCGCCCGCAACCCCAGCCTCGACCGCCAAAAGCGA
AGAGTTCAAACCGAAACCGTTCTTTCTCGATGCGCGTACGCAGGAAGAAC
TCGTCTTCGATACGGCCAAATACCCCTCCCTAGATTTGGAAAATCAGGAG
AAGATCAAGCAGAGGTATCGTGAGCTGGACCAGCAGATCCGTGCAGAGGG
GCTTTATGACTGTCGCTACTTCTCGTACTTTATCGAATGCTGCCGATATA
CGCTCTTCGCTGCCTTGTCCTACTATTTCCTACAGATTGGATGGTATGCG
ACTTCGGGATTCTTCCTTGGATGCTTTTGGCATCAGCTTGTCTTTACTGC
CCATGATGCTGGCCATATGGGCATTACGCACAATTTTCACGTCGACACGG
TGATTGGTATCATTATCGCCGACTACCTTGGAGGACTCAGCCTTGGGTGG
TGGAAACGCAGCCACAATGTCCACCATATCGTGACAAACGCCCCCGAACA
CGACCCGGATATCGAACACATGCCATTCTTCGCCGTTTCCCATCGCTTCC
TTACCAGCCTTCGCAGCACCTACTACGACCGCATCATGGAATTTGATGCT
GCTGCAAACTTCCTTCTCCGCTTCCAGAACTACCTCTACTACCCTATCCT
CCTGTTTGGACGTTTCAACTTGTATCGCCTGAGCTGGGAGTACCTCTTCA
TGGGCCAAGCCCCGAAAAAAGGTCCCGCCTGGTGGCATCGGTGGTTTGAG
ATTGGCGGCCAGGTCTTTTTCTGGATCTGGTTTGGCTATGGAGTGATGTA
CCGGTCGATCCCCGACTGGAGCAGCCGGCTTTCCTTCCTTTTCATCTCCC
ATATGGTTACCTCTCCGCTGCACGTGCAGATCACACTTTCTCACTTCGCC
ATGTCCACCTCCGACATGGGAGTCAACGAGTCTTTCCCACAACGAATGCT
CCGCACCACCATGGATGTCGACTGCCCGACCTGGCTCGACTTCTTCCACG
GCGGTCTGCAATTCCAAGCCATCCATCATCTCTACCCCCGTATTCCTCGG
CACAATCTGCGTCGGACTCAGCGCCTGGTGCTCGACTTTTGCCGCGACAC
TGGCATCCCTTATACCATCTTCACCTTCTACGATGGTAACAAAGAGGTGA
TTGGCAAACTCGGCGATGTCGCAAAGCAGGTTCGCATTCTTGAAGAGTGC
AGGAAGTCATGCGCGGAGAATGGTGTGTTCTCGGATCATCATTGAAGCCA
TTGAAGACTGTCTATGCGAGTCAGTGACCAAGCTAGATGCATCTCTTCTG
TCACTTTATCAAACATGTACTATCCCCCGATCATTGTTGTAAATAGTCCC
ACTCTACGCTACGCTACGCCACCCCACCCCTACCCCACAGCACTATATAG
TCTATCTGGTGGTTGTCCGGATATGGCTGGCGCCTTTTGACTGCCTCGCA
GTGCTTAATGAGATAATGCCCGGTTTGTGATTTTATCGGTTTATAGAATG
CATTATAAATTACATGAATATCAGTAT back to topCoding sequence (CDS) from alignment at ch4:1504539..1506615- >KJC3_005071-T1 ID=KJC3_005071-T1|Name=KJC3_005071-T1|organism=Aspergillus niger KJC3|type=CDS|length=1440bp|location=Sequence derived from alignment at ch4:1504539..1506615- (Aspergillus niger KJC3)
ATGTTGTCCTTTCAGATCGGTCGCATCGAGGGCCCATGGGTGAACTTCCT
GCCGCCCATCCAGGGCGGAAAGTTTCGTCCCTATACCGAGGATTGTTTGT
CCGATGAAGAGAGCTCTGGTCAAGAGAGTTCCGGTCAGGAAACGTCACAG
CCACCATCCCCGATCTTTGATGCCGTCGATAGCACGTCAGGTGCTCGTCA
GCGGAAACCTGCGCCCGCAACCCCAGCCTCGACCGCCAAAAGCGAAGAGT
TCAAACCGAAACCGTTCTTTCTCGATGCGCGTACGCAGGAAGAACTCGTC
TTCGATACGGCCAAATACCCCTCCCTAGATTTGGAAAATCAGGAGAAGAT
CAAGCAGAGGTATCGTGAGCTGGACCAGCAGATCCGTGCAGAGGGGCTTT
ATGACTGTCGCTACTTCTCGTACTTTATCGAATGCTGCCGATATACGCTC
TTCGCTGCCTTGTCCTACTATTTCCTACAGATTGGATGGTATGCGACTTC
GGGATTCTTCCTTGGATGCTTTTGGCATCAGCTTGTCTTTACTGCCCATG
ATGCTGGCCATATGGGCATTACGCACAATTTTCACGTCGACACGGTGATT
GGTATCATTATCGCCGACTACCTTGGAGGACTCAGCCTTGGGTGGTGGAA
ACGCAGCCACAATGTCCACCATATCGTGACAAACGCCCCCGAACACGACC
CGGATATCGAACACATGCCATTCTTCGCCGTTTCCCATCGCTTCCTTACC
AGCCTTCGCAGCACCTACTACGACCGCATCATGGAATTTGATGCTGCTGC
AAACTTCCTTCTCCGCTTCCAGAACTACCTCTACTACCCTATCCTCCTGT
TTGGACGTTTCAACTTGTATCGCCTGAGCTGGGAGTACCTCTTCATGGGC
CAAGCCCCGAAAAAAGGTCCCGCCTGGTGGCATCGGTGGTTTGAGATTGG
CGGCCAGGTCTTTTTCTGGATCTGGTTTGGCTATGGAGTGATGTACCGGT
CGATCCCCGACTGGAGCAGCCGGCTTTCCTTCCTTTTCATCTCCCATATG
GTTACCTCTCCGCTGCACGTGCAGATCACACTTTCTCACTTCGCCATGTC
CACCTCCGACATGGGAGTCAACGAGTCTTTCCCACAACGAATGCTCCGCA
CCACCATGGATGTCGACTGCCCGACCTGGCTCGACTTCTTCCACGGCGGT
CTGCAATTCCAAGCCATCCATCATCTCTACCCCCGTATTCCTCGGCACAA
TCTGCGTCGGACTCAGCGCCTGGTGCTCGACTTTTGCCGCGACACTGGCA
TCCCTTATACCATCTTCACCTTCTACGATGGTAACAAAGAGGTGATTGGC
AAACTCGGCGATGTCGCAAAGCAGGTTCGCATTCTTGAAGAGTGCAGGAA
GTCATGCGCGGAGAATGGTGTGTTCTCGGATCATCATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006629 | lipid metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005071-T1.utr3p1 | KJC3_005071-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005071-T1.utr5p1 | KJC3_005071-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR005804 |
| DBxref | InterPro:IPR012171 |
| DBxref | PFAM:PF00487 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1504539..1506615 - |
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