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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1742224..1744729- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005156-T1 ID=KJC3_005156-T1|Name=KJC3_005156-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2506bp|location=Sequence derived from alignment at ch4:1742224..1744729- (Aspergillus niger KJC3)
GTCGATTGTCTCTGCCTGTGTTTGGACGAGCAAGGCGCGACTTTGACACT
CAGCCCGAATTGACTTTCCTGTCTTCATAGGGCATCTTATCTCCGGGCGC
AGTAAGTGTTGGTTCGCTCTCACCTTCAGCTCATCTCGAAACCCGTCCCG
ACTGACTGTTTTGTCTTTTTTTCCCACCTCCAGGGCAGCCCTGTTAATCC
CCGTTGCTATCCACCCAACACCATGTCCAACCTCTTTTCTTTCGACTCGG
CCCCTGGCGGCGCGAACAAGGGGGGTCTTTTTGGATCTGGTGCCACGAAC
ACTGGCTCTAGCGCTGGCTCGGGCACACTCTTTGGAAACGTAGGTGCTCC
GACGAGCGGCACTTCTTCGCCTTCTTTGTTCGGGGGCGCAGCTGGCAGTG
GAACTGGAGCGGGTACTGGTACTTCGTCGCCTTTCAGTTTCGGAGCTCAG
AGCAAGCCGGGGGCCACCAGTCAGACACCGTTGTTCGGCAACGCATCACA
GACTCCCAACAAGTCGACCGAAGCTGGTAGCTCAGGGCAAACAGCTACGA
GCGGACTCTTTGGCAATGCCGCAAAGCCTGCAGGGGGCCTCTTTGGCAAC
GCTACTTCTACGCCCGGTCAAACAGGAGGTTCTTTGTTCGGCAATGCCTC
GTCCACAACGCCCGCTGGTCCTCCTCCGCAGGGCGCGACTGGCCAGACGC
AGACGCTCTTTGGACAGGCAGCACAAAAGCCTGGCGGTCTCTTCGGAAAC
GTGAACTCGACCACCTCGACTACCTCGACCACCTCATCGGCTGCCCCGTC
GTCTACTACCGCTACAGCCCCCGCCACCACTACCCCGTCGCTGTTCGGAA
ACGCCAACACAAACACCACAACCTCTACCTCCAACACTACGCAACAGCCA
TCAACTGGGGGTCTCTTCGGTGGGGCGAACACAGCGCAGAAACCCCTCTT
TGGTACAAATCCGGCGCCTTCTACGGGAAATAGCCTGTTCGGAAACGCCA
AGCCGGCCGCACCAAGCACCAATGACAGCACTCCAAACACCCTCTTTGGA
AAGGCTCCGGGGGCACCGTCAACGACGACAACCCCGGCCGCAGGAGGAGG
AGCTGGTGCGCAGACATCTTCTCTCTTCAAAGCCCCAGCATCTGGAGCTG
ATGCCACCAAGCCAGTCTTCCCCTCTCTGGGCACTCCGTCCTCGACCCCT
CAAACCTCTACGACGCCAGCTGCCTCGTCCGCTGCGCCACAGACTTCCTC
TCTTTTCCCAGCCCTAGGTGGAGCGTCCTCGTCCGCGACTCCATCATCAA
CACCCGCTCCCTCTGGAGGTTTGTTTGGCGGTGCCCTTGGTGGCGCTAAG
TCCACAGCAACCACCGCTCCCGCCACTACAGCTACCGCAGCTCCCGCGAC
ACAACCCGCGGCAGCCACCGGCGGCCTGTTCGGTAAGCCCGCGGAGACCA
CCCCGTCCACACAGCCAGCCAGCACTGCTGCTGGAGCCTCTGCTACGACG
GCTGGCGACAAGCCCACCCTGACCGCTACCTCGGGCGCCACCTCTTCAGC
TACCACCGGCACAGCAGGCGCAACCGGCACAACCACCGCTACTGGCGGAA
TTGGCCTTGGTGCCTCCACTGCTGGACCGACTCCTCCGGCGCAGTCCCGC
CTGAAGAACAAGACCATGGATGAGATCATCACCCGGTGGGCGACTGATCT
GACCAAGTACCAGAAGGACTTCCGCGAGCAAGCAGAGAAGGTAGCAGAAT
GGGATCGGATGCTGGTTGAGAACGGCACCAAGGTGCAGAAACTGTACGGC
AGCACGGTGGACGCTGAGCGCGCGACTCAAGAAGTCGAGCGTCAGCTGGC
GTCTGTCGAGGGTCAGCAGGAAGAGCTCAGCTCCTGGCTCGACCGGTATG
AGCGTGAAGTGGACGAGATGATTTCCAAGCAAGTCGGACCGGGTGAAACT
CTCCAGGGACCTGACCAGGAGCGTGAACGGACGTATGTTATTCCCATCCA
ACAATTATCCTTTGATCTCTCGGTATGCTAACAGGATTACTAAAACAGAT
ACAAAATGGCCGAGAAGCTCTCCGAGCGCCTGGACGAAATGGGCAAGGAT
CTGACAAGCATGATTGAGGAAGTCAACGGCGCGTCCTCGACTCTCAGCAA
GACGAACAAGGCTGACGAGCCGGTACGTATCCCCTTCTCCCCAAGATCTT
TAAAGCTTATGCTAATGTATACCATGAATAGATCTCGCAAATCGTCCGCA
TCCTCAACTCCCACCTCGCGCAACTGCAGGTCATCGACCAAGGCACCACG
GAGCTCCAGGCCAAGGTCGACGCCGCACAGAAGGCCGGCCAGTCCCTCTC
TTCGCGGTTCGGGTATGGTCTGGGTAGCTCTAGTGTGGGCGGTAGTGCCG
CAGATGATTTCTATCGCTCTTACATGGGACGTCGGTAGAGGAGATGCAGG
GAGTGTGGATTGGTTTTCTGTAAACAACGGTTACGGGATGGTTTTTCTTA
TTAACA back to topCoding sequence (CDS) from alignment at ch4:1742224..1744729- >KJC3_005156-T1 ID=KJC3_005156-T1|Name=KJC3_005156-T1|organism=Aspergillus niger KJC3|type=CDS|length=6273bp|location=Sequence derived from alignment at ch4:1742224..1744729- (Aspergillus niger KJC3)
ATCTCGCAAATCGTCCGCATCCTCAACTCCCACCTCGCGCAACTGCAGGT
CATCGACCAAGGCACCACGGAGCTCCAGGCCAAGGTCGACGCCGCACAGA
AGGCCGGCCAGTCCCTCTCTTCGCGGTTCGGGTATGGTCTGGGTAGCTCT
AGTGTGGGCGGTAGTGCCGCAGATGATTTCTATCGCTCTTACATGGGACG
TCGGTAGATACAAAATGGCCGAGAAGCTCTCCGAGCGCCTGGACGAAATG
GGCAAGGATCTGACAAGCATGATTGAGGAAGTCAACGGCGCGTCCTCGAC
TCTCAGCAAGACGAACAAGGCTGACGAGCCGATGTCCAACCTCTTTTCTT
TCGACTCGGCCCCTGGCGGCGCGAACAAGGGGGGTCTTTTTGGATCTGGT
GCCACGAACACTGGCTCTAGCGCTGGCTCGGGCACACTCTTTGGAAACGT
AGGTGCTCCGACGAGCGGCACTTCTTCGCCTTCTTTGTTCGGGGGCGCAG
CTGGCAGTGGAACTGGAGCGGGTACTGGTACTTCGTCGCCTTTCAGTTTC
GGAGCTCAGAGCAAGCCGGGGGCCACCAGTCAGACACCGTTGTTCGGCAA
CGCATCACAGACTCCCAACAAGTCGACCGAAGCTGGTAGCTCAGGGCAAA
CAGCTACGAGCGGACTCTTTGGCAATGCCGCAAAGCCTGCAGGGGGCCTC
TTTGGCAACGCTACTTCTACGCCCGGTCAAACAGGAGGTTCTTTGTTCGG
CAATGCCTCGTCCACAACGCCCGCTGGTCCTCCTCCGCAGGGCGCGACTG
GCCAGACGCAGACGCTCTTTGGACAGGCAGCACAAAAGCCTGGCGGTCTC
TTCGGAAACGTGAACTCGACCACCTCGACTACCTCGACCACCTCATCGGC
TGCCCCGTCGTCTACTACCGCTACAGCCCCCGCCACCACTACCCCGTCGC
TGTTCGGAAACGCCAACACAAACACCACAACCTCTACCTCCAACACTACG
CAACAGCCATCAACTGGGGGTCTCTTCGGTGGGGCGAACACAGCGCAGAA
ACCCCTCTTTGGTACAAATCCGGCGCCTTCTACGGGAAATAGCCTGTTCG
GAAACGCCAAGCCGGCCGCACCAAGCACCAATGACAGCACTCCAAACACC
CTCTTTGGAAAGGCTCCGGGGGCACCGTCAACGACGACAACCCCGGCCGC
AGGAGGAGGAGCTGGTGCGCAGACATCTTCTCTCTTCAAAGCCCCAGCAT
CTGGAGCTGATGCCACCAAGCCAGTCTTCCCCTCTCTGGGCACTCCGTCC
TCGACCCCTCAAACCTCTACGACGCCAGCTGCCTCGTCCGCTGCGCCACA
GACTTCCTCTCTTTTCCCAGCCCTAGGTGGAGCGTCCTCGTCCGCGACTC
CATCATCAACACCCGCTCCCTCTGGAGGTTTGTTTGGCGGTGCCCTTGGT
GGCGCTAAGTCCACAGCAACCACCGCTCCCGCCACTACAGCTACCGCAGC
TCCCGCGACACAACCCGCGGCAGCCACCGGCGGCCTGTTCGGTAAGCCCG
CGGAGACCACCCCGTCCACACAGCCAGCCAGCACTGCTGCTGGAGCCTCT
GCTACGACGGCTGGCGACAAGCCCACCCTGACCGCTACCTCGGGCGCCAC
CTCTTCAGCTACCACCGGCACAGCAGGCGCAACCGGCACAACCACCGCTA
CTGGCGGAATTGGCCTTGGTGCCTCCACTGCTGGACCGACTCCTCCGGCG
CAGTCCCGCCTGAAGAACAAGACCATGGATGAGATCATCACCCGGTGGGC
GACTGATCTGACCAAGTACCAGAAGGACTTCCGCGAGCAAGCAGAGAAGG
TAGCAGAATGGGATCGGATGCTGGTTGAGAACGGCACCAAGGTGCAGAAA
CTGTACGGCAGCACGGTGGACGCTGAGCGCGCGACTCAAGAAGTCGAGCG
TCAGCTGGCGTCTGTCGAGGGTCAGCAGGAAGAGCTCAGCTCCTGGCTCG
ACCGGTATGAGCGTGAAGTGGACGAGATGATTTCCAAGCAAGTCGGACCG
GGTGAAACTCTCCAGGGACCTGACCAGGAGCGTGAACGGACATCTCGCAA
ATCGTCCGCATCCTCAACTCCCACCTCGCGCAACTGCAGGTCATCGACCA
AGGCACCACGGAGCTCCAGGCCAAGGTCGACGCCGCACAGAAGGCCGGCC
AGTCCCTCTCTTCGCGGTTCGGGTATGGTCTGGGTAGCTCTAGTGTGGGC
GGTAGTGCCGCAGATGATTTCTATCGCTCTTACATGGGACGTCGGTAGAT
ACAAAATGGCCGAGAAGCTCTCCGAGCGCCTGGACGAAATGGGCAAGGAT
CTGACAAGCATGATTGAGGAAGTCAACGGCGCGTCCTCGACTCTCAGCAA
GACGAACAAGGCTGACGAGCCGATGTCCAACCTCTTTTCTTTCGACTCGG
CCCCTGGCGGCGCGAACAAGGGGGGTCTTTTTGGATCTGGTGCCACGAAC
ACTGGCTCTAGCGCTGGCTCGGGCACACTCTTTGGAAACGTAGGTGCTCC
GACGAGCGGCACTTCTTCGCCTTCTTTGTTCGGGGGCGCAGCTGGCAGTG
GAACTGGAGCGGGTACTGGTACTTCGTCGCCTTTCAGTTTCGGAGCTCAG
AGCAAGCCGGGGGCCACCAGTCAGACACCGTTGTTCGGCAACGCATCACA
GACTCCCAACAAGTCGACCGAAGCTGGTAGCTCAGGGCAAACAGCTACGA
GCGGACTCTTTGGCAATGCCGCAAAGCCTGCAGGGGGCCTCTTTGGCAAC
GCTACTTCTACGCCCGGTCAAACAGGAGGTTCTTTGTTCGGCAATGCCTC
GTCCACAACGCCCGCTGGTCCTCCTCCGCAGGGCGCGACTGGCCAGACGC
AGACGCTCTTTGGACAGGCAGCACAAAAGCCTGGCGGTCTCTTCGGAAAC
GTGAACTCGACCACCTCGACTACCTCGACCACCTCATCGGCTGCCCCGTC
GTCTACTACCGCTACAGCCCCCGCCACCACTACCCCGTCGCTGTTCGGAA
ACGCCAACACAAACACCACAACCTCTACCTCCAACACTACGCAACAGCCA
TCAACTGGGGGTCTCTTCGGTGGGGCGAACACAGCGCAGAAACCCCTCTT
TGGTACAAATCCGGCGCCTTCTACGGGAAATAGCCTGTTCGGAAACGCCA
AGCCGGCCGCACCAAGCACCAATGACAGCACTCCAAACACCCTCTTTGGA
AAGGCTCCGGGGGCACCGTCAACGACGACAACCCCGGCCGCAGGAGGAGG
AGCTGGTGCGCAGACATCTTCTCTCTTCAAAGCCCCAGCATCTGGAGCTG
ATGCCACCAAGCCAGTCTTCCCCTCTCTGGGCACTCCGTCCTCGACCCCT
CAAACCTCTACGACGCCAGCTGCCTCGTCCGCTGCGCCACAGACTTCCTC
TCTTTTCCCAGCCCTAGGTGGAGCGTCCTCGTCCGCGACTCCATCATCAA
CACCCGCTCCCTCTGGAGGTTTGTTTGGCGGTGCCCTTGGTGGCGCTAAG
TCCACAGCAACCACCGCTCCCGCCACTACAGCTACCGCAGCTCCCGCGAC
ACAACCCGCGGCAGCCACCGGCGGCCTGTTCGGTAAGCCCGCGGAGACCA
CCCCGTCCACACAGCCAGCCAGCACTGCTGCTGGAGCCTCTGCTACGACG
GCTGGCGACAAGCCCACCCTGACCGCTACCTCGGGCGCCACCTCTTCAGC
TACCACCGGCACAGCAGGCGCAACCGGCACAACCACCGCTACTGGCGGAA
TTGGCCTTGGTGCCTCCACTGCTGGACCGACTCCTCCGGCGCAGTCCCGC
CTGAAGAACAAGACCATGGATGAGATCATCACCCGGTGGGCGACTGATCT
GACCAAGTACCAGAAGGACTTCCGCGAGCAAGCAGAGAAGGTAGCAGAAT
GGGATCGGATGCTGGTTGAGAACGGCACCAAGGTGCAGAAACTGTACGGC
AGCACGGTGGACGCTGAGCGCGCGACTCAAGAAGTCGAGCGTCAGCTGGC
GTCTGTCGAGGGTCAGCAGGAAGAGCTCAGCTCCTGGCTCGACCGGTATG
AGCGTGAAGTGGACGAGATGATTTCCAAGCAAGTCGGACCGGGTGAAACT
CTCCAGGGACCTGACCAGGAGCGTGAACGGACATCTCGCAAATCGTCCGC
ATCCTCAACTCCCACCTCGCGCAACTGCAGGTCATCGACCAAGGCACCAC
GGAGCTCCAGGCCAAGGTCGACGCCGCACAGAAGGCCGGCCAGTCCCTCT
CTTCGCGGTTCGGGTATGGTCTGGGTAGCTCTAGTGTGGGCGGTAGTGCC
GCAGATGATTTCTATCGCTCTTACATGGGACGTCGGTAGATACAAAATGG
CCGAGAAGCTCTCCGAGCGCCTGGACGAAATGGGCAAGGATCTGACAAGC
ATGATTGAGGAAGTCAACGGCGCGTCCTCGACTCTCAGCAAGACGAACAA
GGCTGACGAGCCGATGTCCAACCTCTTTTCTTTCGACTCGGCCCCTGGCG
GCGCGAACAAGGGGGGTCTTTTTGGATCTGGTGCCACGAACACTGGCTCT
AGCGCTGGCTCGGGCACACTCTTTGGAAACGTAGGTGCTCCGACGAGCGG
CACTTCTTCGCCTTCTTTGTTCGGGGGCGCAGCTGGCAGTGGAACTGGAG
CGGGTACTGGTACTTCGTCGCCTTTCAGTTTCGGAGCTCAGAGCAAGCCG
GGGGCCACCAGTCAGACACCGTTGTTCGGCAACGCATCACAGACTCCCAA
CAAGTCGACCGAAGCTGGTAGCTCAGGGCAAACAGCTACGAGCGGACTCT
TTGGCAATGCCGCAAAGCCTGCAGGGGGCCTCTTTGGCAACGCTACTTCT
ACGCCCGGTCAAACAGGAGGTTCTTTGTTCGGCAATGCCTCGTCCACAAC
GCCCGCTGGTCCTCCTCCGCAGGGCGCGACTGGCCAGACGCAGACGCTCT
TTGGACAGGCAGCACAAAAGCCTGGCGGTCTCTTCGGAAACGTGAACTCG
ACCACCTCGACTACCTCGACCACCTCATCGGCTGCCCCGTCGTCTACTAC
CGCTACAGCCCCCGCCACCACTACCCCGTCGCTGTTCGGAAACGCCAACA
CAAACACCACAACCTCTACCTCCAACACTACGCAACAGCCATCAACTGGG
GGTCTCTTCGGTGGGGCGAACACAGCGCAGAAACCCCTCTTTGGTACAAA
TCCGGCGCCTTCTACGGGAAATAGCCTGTTCGGAAACGCCAAGCCGGCCG
CACCAAGCACCAATGACAGCACTCCAAACACCCTCTTTGGAAAGGCTCCG
GGGGCACCGTCAACGACGACAACCCCGGCCGCAGGAGGAGGAGCTGGTGC
GCAGACATCTTCTCTCTTCAAAGCCCCAGCATCTGGAGCTGATGCCACCA
AGCCAGTCTTCCCCTCTCTGGGCACTCCGTCCTCGACCCCTCAAACCTCT
ACGACGCCAGCTGCCTCGTCCGCTGCGCCACAGACTTCCTCTCTTTTCCC
AGCCCTAGGTGGAGCGTCCTCGTCCGCGACTCCATCATCAACACCCGCTC
CCTCTGGAGGTTTGTTTGGCGGTGCCCTTGGTGGCGCTAAGTCCACAGCA
ACCACCGCTCCCGCCACTACAGCTACCGCAGCTCCCGCGACACAACCCGC
GGCAGCCACCGGCGGCCTGTTCGGTAAGCCCGCGGAGACCACCCCGTCCA
CACAGCCAGCCAGCACTGCTGCTGGAGCCTCTGCTACGACGGCTGGCGAC
AAGCCCACCCTGACCGCTACCTCGGGCGCCACCTCTTCAGCTACCACCGG
CACAGCAGGCGCAACCGGCACAACCACCGCTACTGGCGGAATTGGCCTTG
GTGCCTCCACTGCTGGACCGACTCCTCCGGCGCAGTCCCGCCTGAAGAAC
AAGACCATGGATGAGATCATCACCCGGTGGGCGACTGATCTGACCAAGTA
CCAGAAGGACTTCCGCGAGCAAGCAGAGAAGGTAGCAGAATGGGATCGGA
TGCTGGTTGAGAACGGCACCAAGGTGCAGAAACTGTACGGCAGCACGGTG
GACGCTGAGCGCGCGACTCAAGAAGTCGAGCGTCAGCTGGCGTCTGTCGA
GGGTCAGCAGGAAGAGCTCAGCTCCTGGCTCGACCGGTATGAGCGTGAAG
TGGACGAGATGATTTCCAAGCAAGTCGGACCGGGTGAAACTCTCCAGGGA
CCTGACCAGGAGCGTGAACGGAC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005156-T1.utr3p1 | KJC3_005156-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005156-T1.utr5p1 | KJC3_005156-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007758 |
| DBxref | InterPro:IPR025574 |
| DBxref | PFAM:PF13634 |
| DBxref | PFAM:PF05064 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1742224..1744729 - |
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