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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1753228..1757569+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005159-T1 ID=KJC3_005159-T1|Name=KJC3_005159-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4342bp|location=Sequence derived from alignment at ch4:1753228..1757569+ (Aspergillus niger KJC3)
TTTGCTTTGCATCGAGACTTTTCTCTCTCTCTCCCTTTTCCCTTCAACTC
ATACTCTGCAACTCTTTTTTCCCCCTTCTCTTCTTACTTCATTTCATCTC
TATCCTGTCTCTTTTCCTCTCTTTCTCCGTCTCTCAGACACATCAACAAC
CTTCCCAAAAACTGATCCACCTCAAAACTAGCCGCCCTTGTTAGCGCCTG
CACGTCTGCGGCCGTGATCTGATTTGCTTTGCGGGTTGCAGTTCAGACCG
GCGGGGATCGTCGCTGTCTTATTATCGGCTTCACCTGCTGCGGTTGTCCA
TCCTCGCCTACTTACTCTTCTGTGCTCTCGTCTCCCTTCCCTCGGACTTC
TTCGTCGTCTTCTACACGTCAGACCGCGAATCGCCCTGCCAAAGCCTGCT
TCGCGGCACTGCATCAACCCTCACCGAAGAAGCTCTGGCCATCTCCATTT
AACCCTTCGACCCTCGTCGACGGAAGCTTTGTTCAACATAAACCTCCTCC
TCCTACTATCCACCTATCCACCTCTATCCACCCACTAGTTATCTACTTCT
CCTCCTTCCACTTCCATCGATTAGCTAAACCCGGACCCATCATCTGTTCT
TCCCTCTTTACCTTCTCCATCTTCGCTTCGCCGCGAGCCAGATTCCTTTC
CACCCTTACCCCGTCAATCTTTAACTTCGTCTAGTCACATTCCTCTCACC
AACCTCCATTCTCTGAACTTGGATCGCCTCCCCTTCTTTTCTTTCCCCAA
ATCTGCTTTTTTAAATTACCCGGGAGGGCGGCTTGCCCCATGTCCGGCGC
AATTCCTCCCCTCCCATCTGTGTTGTCGCTCTCTGGGTTGCTTCCCCCCA
CTTCGGCGCTTTAACCGGCCTCCCTTTCGTCATTCCCCCCTTCCGTCACA
TCCTCGCTTCCAATTTCTCGCGACTCTCGATACAGCCTGAGGATACACAA
TGGCTCTCACAACACCTCCTCGTGGGGTAACGCCTGGCGACCTTCTTCTC
GTCGTTCGTAAGTAGCAATTTCTTGCTTCCTACCTCGGTCGCTGTGTGCG
ACCCCCGCCCTGTCTATCTTCAATTGGGTTGGTTTGCTAACCATTGTGTC
AGATGATTTCGATGCGCGCGGCCCTGATGAGCTCACCCTGCGCCGCGGAG
AGAAAATTGAGCTCGTGGAGCTGGATGATGGGTTTGGAGATGGGTGGTAT
CTAGGCAAGGATTTGAGTACGGGCTCAACTGGTCTTTTCCCAGGAGGTAT
GAAACTTGAGAGCGCTTATAATCTGCAAAGACCGCATTTGACTGACTGGG
GACTTCCGTTTCTGCTCCAGTTTACACCACTACTGCCCCGAGGATTCCCA
CCAGACAGCGGCTAGATGCCGATGGCACGACCACATTGGCCTCAGAGGTC
GGGACGGATTCCGAATCGAGCCAGTTGGAAACCACAGACTCCCTCTCATT
TCCCCAGAGCGGCGAATCCACCCCGCATGTTTCTCGCCATACCAGTGCCT
CGGACCTGCGGGCTCCAGAGTTGCAAGGGGGCCCCGTCGCCCCAGCTTTT
TCTCCGAAACAGCAGAACCGCTCCAGTTCCTCTCCGCTACCAACCTCCAC
TATGAGCATCGATATTCAACAGTCAATTCGGCAGACCATGGACGGCCACC
ATGCCAATGGCCAAGACAGCCCGGTCATGAACGAGACGCTTAGCGTTATC
GACGAGCACATCACCGACCTGAGCACGCCGCGCCATAGTGTGGCCGGTCA
GGAATCCAAGCACATGAACGACTCGGCCAGCGAGTACAGCAGCCACTTCG
AGCACCGGATGTCGTACATCAATGGGCACGAAACCGATGAGGAAGAAGAG
AACCAGCCGCGTGAAGAGCAGGTCCGGCAGTGGACGCCTGCAGAAACCGC
CAAGCAGTTGCGGCAATGGGGTGTCGAGGACAAGCACTGTGGCATCTTCG
AGGATCAGGAGATCACCGGCGATGTGTTACTGGACATGAACCAGGACTTT
ATCTTCATGAAGGAGTTTGATTTTGGCGTCATGGGGAGGCGTTTGAAGAC
CTGGCACAAGATTCGAGCATTCCAGGACGAAATCAAGGGCGTCAACCCCT
CGTCTCAACACCACCCTCGCGGTTCGGTAGCTGCTGTTCCCGCTCCGCCA
GAGGAACGAACACTCAGTCGCGCCAGCCATACGGGCCCGCTCCTGCCCAG
GATCCCGACGCTGCGAGGGTCGAGCGGCACCCAGCACCCCCGCCTGGTCA
GCAGTAGTATGCAGAGCAACACCAGCTCGCCCATCACGCCGCAGACACCC
AACTATGTGAACCATTCTCGCCGACCGTCCGCCGCTTCCATCCGCGAGAT
CAACCACTCCCGACGCCACTCATCCATCGACACGACGAACCGGTACTCGG
GTGCCCTTGAAGGTTCGCCAGGCATCAACAAGCGCAGTTCGTTTGATCGC
GGTTGGACTTTGGCCACCGGCGCTCAGCGGCTGCCTCCTCGCCCTGGAAC
TGCAGCCGGCACGTCTCACCCTCAGGACATGGGTTTCTTTTCCCAGCTGA
GTCACCGCCCCTCAAACTCAAACGGGTCTGATCCAGCTGTCTCCGTGACC
GACGAATTGGACCGGGGCTACTTCTCTGGGCCTGAGGGGGACATGCGCAA
GAACCGGCGCCTACAGAAACGCCAATCTGCTGCAGGCAGTGCGGACTCGC
GGTCATCGAACTTGACGAATGACCAGCTCCGCGTTGGTAAGCGCCATTCG
CGCATTGGCAGCATGGACTCTATTCGGGAGTCTGTCAAGCAGATGAATCC
TCCAGCCAAATCCCACACCAGTCCGGTGCCCAAGGGCCGCCTCCGTAGCC
TGAGCACCCGCATCGTTGACCGCCGAGGACAGCAGTCAGCGCCCGCTTCC
GCAGTAGAGGATCGGCCCAGCGGTGCGTTAGGCTTGTTCGGTCCTCTGTT
TGGAAAGTCCGACAGTGATTCCTCGCGCTCGTCTGGTGTACCCTTGTCTC
AACTCAAGGGTGCGGGACCGAAGTTCCGGCGTGCCATGGGAATCCGTGCT
TCGTCTGACGTGGCGCCGAAGGGAATTGATACGTCGACGCCGCCGCCGGC
CTCCCCCGTTCGGGACAATGATCCGTCGGCGCGGACCGGGTCGACCACCC
CTTCAACATCCAAGAGCTCGGAGCGACACAGCACGGACGGATCAAATAAG
ACCGCCGAGGGCGGGCTGTGGCCTCGATCCCGGCCATCCGTCAAGGCGGG
GGTCAAGTCCAAGAAAGACACCAGCGCGTATACCCGCGGGCTGGAAAAGA
AATCGCCACAAGAGCAGATGGTGGGATGCGATTATTTCGGGTGGATGAAG
AAGCGGTCTTCCAATCTAATGACGACGTGGAAACCCCGGCTGTTTGTCCT
GCGGGGCCGGCGTCTGTCGTACTACTACTCGGAACAGGACACAGAGGAGC
GTGGTTTGATTGATATTACAGCTCATCGAGTGTTGCGCGCAGACAATGAC
CCCATTGTGGCCCTCCATGCCACCATCACGGGCTCGACCGCATCGCCGAC
TCCGGCCAGTCAAATGAGCCAGGCGGATGGAGCTTCATCCGACAAGGCTG
CAGCAGAGGCCCTCCGGGCAACCAAGGGAGCTGGTGAAGGACCGTTCTTC
TTCAAGCTAGTGCCGCCAAAGTCAGGGACATCACGGACAGTTCAGTTTAC
CAAGCCGGCGATCCATTACTTCCAAGTGGACAACGTACAAGAGGGTCGAC
TCTGGATGGCGGCGTTGATGAAGGCGACGATTGAGCGGGACATGGCCCTG
CCAGTGGAGACAACGAACAAACAACGTACGATCAGTCTCAAGGAGGCGCG
GCTGATGAACCAGCGTCCTCCAGCACTGATGACCGGATCGCCTAATACAG
GGGAGGTAGCTCCGTCAGAGGCAGAGACGGAGACACAGGACAGCTTTACG
GATCTGGAGCAAGATCGCCAAGGGCTGCTAATCCAGGGGGTGACCATGGA
CCCGGAGACAGAGCCGGTATACGTGGACGCAGAGGAGCATCGATCGGCGA
GTCCGGTCGCGATGGACGACGAGGTGTCAGTTCCTGGATTGCAGCGGAAC
TCGCAGTAATTAATGGAGGATTGATTGATTGATCGATTTGCTTATGTGTG
ATGTATTGCTTTTTACCGCAGCCAGGTTGGCGTTTTATGTGATATACCCC
GCTTGAATGTTTTCATATGTGAACGAGTCTATCTATCTATGTGTCTGTCT
GTCTGTCTGTCTACTATGTAGGATGTAATATTGATGTGAATGTTGGATGT
GAATTCTTTATCAGTATAAGCTCTATTCAGTATAAGCGACGG back to topCoding sequence (CDS) from alignment at ch4:1753228..1757569+ >KJC3_005159-T1 ID=KJC3_005159-T1|Name=KJC3_005159-T1|organism=Aspergillus niger KJC3|type=CDS|length=2508bp|location=Sequence derived from alignment at ch4:1753228..1757569+ (Aspergillus niger KJC3)
ATGAGCATCGATATTCAACAGTCAATTCGGCAGACCATGGACGGCCACCA
TGCCAATGGCCAAGACAGCCCGGTCATGAACGAGACGCTTAGCGTTATCG
ACGAGCACATCACCGACCTGAGCACGCCGCGCCATAGTGTGGCCGGTCAG
GAATCCAAGCACATGAACGACTCGGCCAGCGAGTACAGCAGCCACTTCGA
GCACCGGATGTCGTACATCAATGGGCACGAAACCGATGAGGAAGAAGAGA
ACCAGCCGCGTGAAGAGCAGGTCCGGCAGTGGACGCCTGCAGAAACCGCC
AAGCAGTTGCGGCAATGGGGTGTCGAGGACAAGCACTGTGGCATCTTCGA
GGATCAGGAGATCACCGGCGATGTGTTACTGGACATGAACCAGGACTTTA
TCTTCATGAAGGAGTTTGATTTTGGCGTCATGGGGAGGCGTTTGAAGACC
TGGCACAAGATTCGAGCATTCCAGGACGAAATCAAGGGCGTCAACCCCTC
GTCTCAACACCACCCTCGCGGTTCGGTAGCTGCTGTTCCCGCTCCGCCAG
AGGAACGAACACTCAGTCGCGCCAGCCATACGGGCCCGCTCCTGCCCAGG
ATCCCGACGCTGCGAGGGTCGAGCGGCACCCAGCACCCCCGCCTGGTCAG
CAGTAGTATGCAGAGCAACACCAGCTCGCCCATCACGCCGCAGACACCCA
ACTATGTGAACCATTCTCGCCGACCGTCCGCCGCTTCCATCCGCGAGATC
AACCACTCCCGACGCCACTCATCCATCGACACGACGAACCGGTACTCGGG
TGCCCTTGAAGGTTCGCCAGGCATCAACAAGCGCAGTTCGTTTGATCGCG
GTTGGACTTTGGCCACCGGCGCTCAGCGGCTGCCTCCTCGCCCTGGAACT
GCAGCCGGCACGTCTCACCCTCAGGACATGGGTTTCTTTTCCCAGCTGAG
TCACCGCCCCTCAAACTCAAACGGGTCTGATCCAGCTGTCTCCGTGACCG
ACGAATTGGACCGGGGCTACTTCTCTGGGCCTGAGGGGGACATGCGCAAG
AACCGGCGCCTACAGAAACGCCAATCTGCTGCAGGCAGTGCGGACTCGCG
GTCATCGAACTTGACGAATGACCAGCTCCGCGTTGGTAAGCGCCATTCGC
GCATTGGCAGCATGGACTCTATTCGGGAGTCTGTCAAGCAGATGAATCCT
CCAGCCAAATCCCACACCAGTCCGGTGCCCAAGGGCCGCCTCCGTAGCCT
GAGCACCCGCATCGTTGACCGCCGAGGACAGCAGTCAGCGCCCGCTTCCG
CAGTAGAGGATCGGCCCAGCGGTGCGTTAGGCTTGTTCGGTCCTCTGTTT
GGAAAGTCCGACAGTGATTCCTCGCGCTCGTCTGGTGTACCCTTGTCTCA
ACTCAAGGGTGCGGGACCGAAGTTCCGGCGTGCCATGGGAATCCGTGCTT
CGTCTGACGTGGCGCCGAAGGGAATTGATACGTCGACGCCGCCGCCGGCC
TCCCCCGTTCGGGACAATGATCCGTCGGCGCGGACCGGGTCGACCACCCC
TTCAACATCCAAGAGCTCGGAGCGACACAGCACGGACGGATCAAATAAGA
CCGCCGAGGGCGGGCTGTGGCCTCGATCCCGGCCATCCGTCAAGGCGGGG
GTCAAGTCCAAGAAAGACACCAGCGCGTATACCCGCGGGCTGGAAAAGAA
ATCGCCACAAGAGCAGATGGTGGGATGCGATTATTTCGGGTGGATGAAGA
AGCGGTCTTCCAATCTAATGACGACGTGGAAACCCCGGCTGTTTGTCCTG
CGGGGCCGGCGTCTGTCGTACTACTACTCGGAACAGGACACAGAGGAGCG
TGGTTTGATTGATATTACAGCTCATCGAGTGTTGCGCGCAGACAATGACC
CCATTGTGGCCCTCCATGCCACCATCACGGGCTCGACCGCATCGCCGACT
CCGGCCAGTCAAATGAGCCAGGCGGATGGAGCTTCATCCGACAAGGCTGC
AGCAGAGGCCCTCCGGGCAACCAAGGGAGCTGGTGAAGGACCGTTCTTCT
TCAAGCTAGTGCCGCCAAAGTCAGGGACATCACGGACAGTTCAGTTTACC
AAGCCGGCGATCCATTACTTCCAAGTGGACAACGTACAAGAGGGTCGACT
CTGGATGGCGGCGTTGATGAAGGCGACGATTGAGCGGGACATGGCCCTGC
CAGTGGAGACAACGAACAAACAACGTACGATCAGTCTCAAGGAGGCGCGG
CTGATGAACCAGCGTCCTCCAGCACTGATGACCGGATCGCCTAATACAGG
GGAGGTAGCTCCGTCAGAGGCAGAGACGGAGACACAGGACAGCTTTACGG
ATCTGGAGCAAGATCGCCAAGGGCTGCTAATCCAGGGGGTGACCATGGAC
CCGGAGACAGAGCCGGTATACGTGGACGCAGAGGAGCATCGATCGGCGAG
TCCGGTCGCGATGGACGACGAGGTGTCAGTTCCTGGATTGCAGCGGAACT
CGCAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005159-T1.utr3p1 | KJC3_005159-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001660 |
| DBxref | InterPro:IPR013761 |
| DBxref | InterPro:IPR001849 |
| DBxref | PFAM:PF07647 |
| DBxref | PFAM:PF00169 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1753228..1757569 + |
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