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KJC3_005203-T1, KJC3_005203-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005203-T1
Unique NameKJC3_005203-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1890976..1892668-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005203-T1 ID=KJC3_005203-T1|Name=KJC3_005203-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1693bp|location=Sequence derived from alignment at ch4:1890976..1892668- (Aspergillus niger KJC3)
GTCTCGCCGCCCGGCGGAATCTCCACGTGATAGCACCGGTCCAACAACGC
AACCTCCATCTGTCTGGCCATCGCCGCAACGACGGGAAAAGATGGTTCTG
GAACTTCATATTTGGGGTCCGGCGTTTTCATTGCCGTCTATCGATGCGCA
ATGTCTCGCCGCAATCACGTATCTGTCCCTGACGGTGCCCAAGGACGCCT
GGGTACTCGTCGCAAGCAGTGATCCTTCTGTGTCGCCGACTTGTATGTTT
GTCTGAGTGGTTTATTCTCCGAATACTAGTTTCTGGAGGGCCCCTGCTCT
ACGCTCGTGGGCTTCATGACGCATTGACTAACATTATACTTTTTGCAGGC
GAACTACCAGCCCTCAGAAATGGCTCAACATGGGTAAGCCGGTTCCGCAA
TATCGTCGATTACCTCCGTCAGTATTCGAACGGCGACTGGGACCTGGATC
AGGGCCTCAGTGGGATCGAAAAAGCAGATAACACTGCGTATGCTTTCCCA
TACCCCAGTATCTTGATATAATATGTTCGGGAGAAGAGGCAGATTCTAAC
CGGTCATCAACAGCTTCTCCGCCTTCCTTGAATCCCGCGCTCAATCCCTC
CTCGACCTCTCCCTCTACGTCACCAGCCAAAACTACTACAACTGCACCTC
CCCCTCCTACGGCGCCATCCTCCAATGGCCCAACCAATGGATTCTCCCTC
CGAAACTCCACAGCGCCGCCAAAACCCGCACCGAACATCTCGGCCTCTCC
TCCCTGGACATACAAGCCATCGAAGACCAACGGAAACGTGACCACTCCGC
CGCCGTCGCAGCAGGCCAGATCCCCAAGAACCTCATTCCGCAGCCACGCG
ACACTGTTTCATCCCTACTCGGCAAGACGGCGCAGCAGAACCAGTTCAAG
CTGGAGGCGTTGACCGCGGAACTGTTCGAGCCACTCGAGGAAATCCTTAA
CGGGAAGGGATACTTCCTGCGCACTCGCGAGGACGGACCCACGAGCCTGG
ACTGTCTGGCCCTGGGATACCTGAGTCTGGCACTTGTGCCGGAGCTGCCT
AACTCATGGCTGAGGGATGCGATGCGCAGCAAGGCACCCCAGGTGACGGC
GTACACGGAGCGAATGGGGAAGGAGATCTTCGGCGTGGTTGAGCTCGAGC
ATGCTCTTCCCACAGATGATACCCAGAGATCACGATCATCGATTCTGCCG
TGGCAGGCACCGCAACGAGCTCGGTTGGCTACGATTGGAAGCACCCTTTA
CAACACCCTTGCGGATGCGACGCCTATCTGGAAGGATATCCGCTTGAACA
ACCGGATGAAGGAGGCGATTGATGACAACGGGGAGCTGAGCGGGATTGAG
CGCAGGACGATGTCTGCGTTTGCGGCGGCACAGTCGAAGGATGTGTGGCT
GTCGGTGGGGTATGCTGTTGTGAGTGTTGTGGCGTTTGTTGGGTATCTTA
CGCTTCAACCGTCGATTCGGAAAGGGTGGACCCAGACTATTCAAGCTGTA
AAAGAGGAGGGTGAAGGAGAGGGTGAGGATGAGTTTGAGGTGGCAACTGA
AGGGGAAGGAGAAATAGATCTTGAAACGGACGCGATGAATATCCTGCGTG
AGCTATAGTGTATATTAGATAGATTGTTTCATTAATATATCCTCCCCTAT
TTTGAGGTGTACGATTAGCAAACCAGTATCTGTTGAATCCTCA
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Coding sequence (CDS) from alignment at ch4:1890976..1892668-

>KJC3_005203-T1 ID=KJC3_005203-T1|Name=KJC3_005203-T1|organism=Aspergillus niger KJC3|type=CDS|length=4005bp|location=Sequence derived from alignment at ch4:1890976..1892668- (Aspergillus niger KJC3)
CTTCTCCGCCTTCCTTGAATCCCGCGCTCAATCCCTCCTCGACCTCTCCC
TCTACGTCACCAGCCAAAACTACTACAACTGCACCTCCCCCTCCTACGGC
GCCATCCTCCAATGGCCCAACCAATGGATTCTCCCTCCGAAACTCCACAG
CGCCGCCAAAACCCGCACCGAACATCTCGGCCTCTCCTCCCTGGACATAC
AAGCCATCGAAGACCAACGGAAACGTGACCACTCCGCCGCCGTCGCAGCA
GGCCAGATCCCCAAGAACCTCATTCCGCAGCCACGCGACACTGTTTCATC
CCTACTCGGCAAGACGGCGCAGCAGAACCAGTTCAAGCTGGAGGCGTTGA
CCGCGGAACTGTTCGAGCCACTCGAGGAAATCCTTAACGGGAAGGGATAC
TTCCTGCGCACTCGCGAGGACGGACCCACGAGCCTGGACTGTCTGGCCCT
GGGATACCTGAGTCTGGCACTTGTGCCGGAGCTGCCTAACTCATGGCTGA
GGGATGCGATGCGCAGCAAGGCACCCCAGGTGACGGCGTACACGGAGCGA
ATGGGGAAGGAGATCTTCGGCGTGGTTGAGCTCGAGCATGCTCTTCCCAC
AGATGATACCCAGAGATCACGATCATCGATTCTGCCGTGGCAGGCACCGC
AACGAGCTCGGTTGGCTACGATTGGAAGCACCCTTTACAACACCCTTGCG
GATGCGACGCCTATCTGGAAGGATATCCGCTTGAACAACCGGATGAAGGA
GGCGATTGATGACAACGGGGAGCTGAGCGGGATTGAGCGCAGGACGATGT
CTGCGTTTGCGGCGGCACAGTCGAAGGATGTGTGGCTGTCGGTGGGGTAT
GCTGTTGTGAGTGTTGTGGCGTTTGTTGGGTATCTTACGCTTCAACCGTC
GATTCGGAAAGGGTGGACCCAGACTATTCAAGCTGTAAAAGAGGAGGGTG
AAGGAGAGGGTGAGGATGAGTTTGAGGTGGCAACTGAAGGGGAAGGAGAA
ATAGATCTTGAAACGGACGCGATGAATATCCTGCGTGAGCTATAGGCGAA
CTACCAGCCCTCAGAAATGGCTCAACATGGGTAAGCCGGTTCCGCAATAT
CGTCGATTACCTCCGTCAGTATTCGAACGGCGACTGGGACCTGGATCAGG
GCCTCAGTGGGATCGAAAAAGCAGATAACACTGCATGGTTCTGGAACTTC
ATATTTGGGGTCCGGCGTTTTCATTGCCGTCTATCGATGCGCAATGTCTC
GCCGCAATCACGTATCTGTCCCTGACGGTGCCCAAGGACGCCTGGGTACT
CGTCGCAAGCAGTGATCCTTCTGTGTCGCCGACTTCTTCTCCGCCTTCCT
TGAATCCCGCGCTCAATCCCTCCTCGACCTCTCCCTCTACGTCACCAGCC
AAAACTACTACAACTGCACCTCCCCCTCCTACGGCGCCATCCTCCAATGG
CCCAACCAATGGATTCTCCCTCCGAAACTCCACAGCGCCGCCAAAACCCG
CACCGAACATCTCGGCCTCTCCTCCCTGGACATACAAGCCATCGAAGACC
AACGGAAACGTGACCACTCCGCCGCCGTCGCAGCAGGCCAGATCCCCAAG
AACCTCATTCCGCAGCCACGCGACACTGTTTCATCCCTACTCGGCAAGAC
GGCGCAGCAGAACCAGTTCAAGCTGGAGGCGTTGACCGCGGAACTGTTCG
AGCCACTCGAGGAAATCCTTAACGGGAAGGGATACTTCCTGCGCACTCGC
GAGGACGGACCCACGAGCCTGGACTGTCTGGCCCTGGGATACCTGAGTCT
GGCACTTGTGCCGGAGCTGCCTAACTCATGGCTGAGGGATGCGATGCGCA
GCAAGGCACCCCAGGTGACGGCGTACACGGAGCGAATGGGGAAGGAGATC
TTCGGCGTGGTTGAGCTCGAGCATGCTCTTCCCACAGATGATACCCAGAG
ATCACGATCATCGATTCTGCCGTGGCAGGCACCGCAACGAGCTCGGTTGG
CTACGATTGGAAGCACCCTTTACAACACCCTTGCGGATGCGACGCCTATC
TGGAAGGATATCCGCTTGAACAACCGGATGAAGGAGGCGATTGATGACAA
CGGGGAGCTGAGCGGGATTGAGCGCAGGACGATGTCTGCGTTTGCGGCGG
CACAGTCGAAGGATGTGTGGCTGTCGGTGGGGTATGCTGTTGTGAGTGTT
GTGGCGTTTGTTGGGTATCTTACGCTTCAACCGTCGATTCGGAAAGGGTG
GACCCAGACTATTCAAGCTGTAAAAGAGGAGGGTGAAGGAGAGGGTGAGG
ATGAGTTTGAGGTGGCAACTGAAGGGGAAGGAGAAATAGATCTTGAAACG
GACGCGATGAATATCCTGCGTGAGCTATAGGCGAACTACCAGCCCTCAGA
AATGGCTCAACATGGGTAAGCCGGTTCCGCAATATCGTCGATTACCTCCG
TCAGTATTCGAACGGCGACTGGGACCTGGATCAGGGCCTCAGTGGGATCG
AAAAAGCAGATAACACTGCATGGTTCTGGAACTTCATATTTGGGGTCCGG
CGTTTTCATTGCCGTCTATCGATGCGCAATGTCTCGCCGCAATCACGTAT
CTGTCCCTGACGGTGCCCAAGGACGCCTGGGTACTCGTCGCAAGCAGTGA
TCCTTCTGTGTCGCCGACTTCTTCTCCGCCTTCCTTGAATCCCGCGCTCA
ATCCCTCCTCGACCTCTCCCTCTACGTCACCAGCCAAAACTACTACAACT
GCACCTCCCCCTCCTACGGCGCCATCCTCCAATGGCCCAACCAATGGATT
CTCCCTCCGAAACTCCACAGCGCCGCCAAAACCCGCACCGAACATCTCGG
CCTCTCCTCCCTGGACATACAAGCCATCGAAGACCAACGGAAACGTGACC
ACTCCGCCGCCGTCGCAGCAGGCCAGATCCCCAAGAACCTCATTCCGCAG
CCACGCGACACTGTTTCATCCCTACTCGGCAAGACGGCGCAGCAGAACCA
GTTCAAGCTGGAGGCGTTGACCGCGGAACTGTTCGAGCCACTCGAGGAAA
TCCTTAACGGGAAGGGATACTTCCTGCGCACTCGCGAGGACGGACCCACG
AGCCTGGACTGTCTGGCCCTGGGATACCTGAGTCTGGCACTTGTGCCGGA
GCTGCCTAACTCATGGCTGAGGGATGCGATGCGCAGCAAGGCACCCCAGG
TGACGGCGTACACGGAGCGAATGGGGAAGGAGATCTTCGGCGTGGTTGAG
CTCGAGCATGCTCTTCCCACAGATGATACCCAGAGATCACGATCATCGAT
TCTGCCGTGGCAGGCACCGCAACGAGCTCGGTTGGCTACGATTGGAAGCA
CCCTTTACAACACCCTTGCGGATGCGACGCCTATCTGGAAGGATATCCGC
TTGAACAACCGGATGAAGGAGGCGATTGATGACAACGGGGAGCTGAGCGG
GATTGAGCGCAGGACGATGTCTGCGTTTGCGGCGGCACAGTCGAAGGATG
TGTGGCTGTCGGTGGGGTATGCTGTTGTGAGTGTTGTGGCGTTTGTTGGG
TATCTTACGCTTCAACCGTCGATTCGGAAAGGGTGGACCCAGACTATTCA
AGCTGTAAAAGAGGAGGGTGAAGGAGAGGGTGAGGATGAGTTTGAGGTGG
CAACTGAAGGGGAAGGAGAAATAGATCTTGAAACGGACGCGATGAATATC
CTGCGTGAGCTATAGGCGAACTACCAGCCCTCAGAAATGGCTCAACATGG
GTAAGCCGGTTCCGCAATATCGTCGATTACCTCCGTCAGTATTCGAACGG
CGACTGGGACCTGGATCAGGGCCTCAGTGGGATCGAAAAAGCAGATAACA
CTGCATGGTTCTGGAACTTCATATTTGGGGTCCGGCGTTTTCATTGCCGT
CTATCGATGCGCAATGTCTCGCCGCAATCACGTATCTGTCCCTGACGGTG
CCCAAGGACGCCTGGGTACTCGTCGCAAGCAGTGATCCTTCTGTGTCGCC
GACTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0001401SAM complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005203KJC3_005203Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005203-T1KJC3_005203-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005203-T1.cdsKJC3_005203-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005203-T1.utr3p1KJC3_005203-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005203-T1.exon3KJC3_005203-T1.exon3Aspergillus niger KJC3exon
KJC3_005203-T1.exon2KJC3_005203-T1.exon2Aspergillus niger KJC3exon
KJC3_005203-T1.exon1KJC3_005203-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005203-T1.utr5p1KJC3_005203-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR033468
DBxrefInterPro:IPR019564
DBxrefPFAM:PF10568
DBxrefPFAM:PF17171
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1890976..1892668 -
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