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KJC3_005265-T1, KJC3_005265-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005265-T1
Unique NameKJC3_005265-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2130794..2132194+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005265-T1 ID=KJC3_005265-T1|Name=KJC3_005265-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1401bp|location=Sequence derived from alignment at ch4:2130794..2132194+ (Aspergillus niger KJC3)
CCGAGACAACGCCATGTTAAGCTCGCCTCTTCACTTCTTCCACGATCACT
CGAACCACACTGAAGCATTATTTCACTCTCAATTAAAATAACCATGTCCC
TCCCCTCAATAACCCGCAGTTCCACACGAACCCTCCTCCGCCCACAAACC
GTCACACCCCAACTCACCCGCGCATTCTCCATCCGCCCAGCACTCCGCAC
CGACACCTCCGCATCCACTATTGCAACATCCTTCCTCACGCGCTTCCAAT
CCCTAGGCCCACAAACCCGCTCCCAAATCCTCGATGCTAATCAACTCCGA
CTTCTCTCACTAACACTCAATCGACCCTCACTATTCCCCAACTCCCCATC
TCTCTCCAACACCCCAACCTCCCTGCCGACCGGCACGCCCTTACCCGCCG
GATACCACCTCGTGTACTTCACCCCCGCATTCTTGGAAAATGAGCTAGGC
GCGGACGGCACCGACACCTCATATAACCCTGCGTCGCCGTTCACGCGTCG
CATGTGGGCCGGCGGGGAGGTGCATTGGCCGAGGGGAAAGGACGGCAAGC
CGAATTACTTAAGGGTAGGGCAGGAGGTGCAGGAGACGACGAGGGTGCTT
AGTGCGGAGCCGAAGGTCGTGAGGAAGACAGGGGAGGAGATGATTGTTGT
GGGTGTAGAGAAGGAGTTTAGGAATGAGGATGGGGTGGCGGTTTTGGATA
GGAGGTGAGCTGATCTGCTATCTATTTGTTTTGTGAGTTTGGGGATAGTG
CTGATGAGACTATATGTAGGAACTGGGTCTTTCGCAAAGCTCTTACCTCG
CCGTCGCCTACGAGTTCATCTACACCCCCGGCGACGAAGGCATTTAATGG
ACCAGCTAGTTCGTCTACGGAGACGAGTGAAAATGTGCACACGCGCACAT
TGCGCCAAACGGCAGTGACATTGTTCCGGTTCTCCGCGTTGACGTTCAAT
CCGCACAAGATCCATTACTCGACACCGTGGGCGAGAGATGTCGAGGGTCA
TAAGGATATTGTTGTGCATGGACCGTTGAATCTCATTTCGATTTTGCATC
TGTGGCGCGATACGAGGAAGAATGGAAGTGGGGAGGAGGTGGTTCTTCCG
GAGAAGATCTCGTACAGGGCGACGAGTCCGCTGTATGCGGAGGAGGAGTA
TCGGATTGTGTTGGAAGATGGAGAGGATGGGATCGGGAGGGTGCAGATTG
TTGCGCCAGGGGAGGTGGTGGCTATGAAGGCGGAGATTCAGTAGAAATCG
TGTAGTTAGTAGGAGTGGGTTGTAGATATTGTCTGTTTCTAGCTGGGAGG
GATACATGTATGGGGTGCTACACAAGAGTACTAAATGACATACCCTGAGA
TAGAAATAGTATAGGAGTTATCTACTGTATAGTACTACCCTTTTGAACAA
G
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Coding sequence (CDS) from alignment at ch4:2130794..2132194+

>KJC3_005265-T1 ID=KJC3_005265-T1|Name=KJC3_005265-T1|organism=Aspergillus niger KJC3|type=CDS|length=2172bp|location=Sequence derived from alignment at ch4:2130794..2132194+ (Aspergillus niger KJC3)
ATGTCCCTCCCCTCAATAACCCGCAGTTCCACACGAACCCTCCTCCGCCC
ACAAACCGTCACACCCCAACTCACCCGCGCATTCTCCATCCGCCCAGCAC
TCCGCACCGACACCTCCGCATCCACTATTGCAACATCCTTCCTCACGCGC
TTCCAATCCCTAGGCCCACAAACCCGCTCCCAAATCCTCGATGCTAATCA
ACTCCGACTTCTCTCACTAACACTCAATCGACCCTCACTATTCCCCAACT
CCCCATCTCTCTCCAACACCCCAACCTCCCTGCCGACCGGCACGCCCTTA
CCCGCCGGATACCACCTCGTGTACTTCACCCCCGCATTCTTGGAAAATGA
GCTAGGCGCGGACGGCACCGACACCTCATATAACCCTGCGTCGCCGTTCA
CGCGTCGCATGTGGGCCGGCGGGGAGGTGCATTGGCCGAGGGGAAAGGAC
GGCAAGCCGAATTACTTAAGGGTAGGGCAGGAGGTGCAGGAGACGACGAG
GGTGCTTAGTGCGGAGCCGAAGGTCGTGAGGAAGACAGGGGAGGAGATGA
TTGTTGTGGGTGTAGAGAAGGAGTTTAGGAATGAGGATGGGGTGGCGGTT
TTGGATAGGAGGAACTGGGTCTTTCGCAAAGCTCTTACCTCGCCGTCGCC
TACGAGTTCATCTACACCCCCGGCGACGAAGGCATTTAATGGACCAGCTA
GTTCGTCTACGGAGACGAGTGAAAATGTGCACACGCGCACATTGCGCCAA
ACGGCAGTGACATTGTTCCGGTTCTCCGCGTTGACGTTCAATCCGCACAA
GATCCATTACTCGACACCGTGGGCGAGAGATGTCGAGGGTCATAAGGATA
TTGTTGTGCATGGACCGTTGAATCTCATTTCGATTTTGCATCTGTGGCGC
GATACGAGGAAGAATGGAAGTGGGGAGGAGGTGGTTCTTCCGGAGAAGAT
CTCGTACAGGGCGACGAGTCCGCTGTATGCGGAGGAGGAGTATCGGATTG
TGTTGGAAGATGGAGAGGATGGGATCGGGAGGGTGCAGATTGTTGCGCCA
GGGGAGGTGGTGGCTATGAAGGCGGAGATTCAGTAGATGTCCCTCCCCTC
AATAACCCGCAGTTCCACACGAACCCTCCTCCGCCCACAAACCGTCACAC
CCCAACTCACCCGCGCATTCTCCATCCGCCCAGCACTCCGCACCGACACC
TCCGCATCCACTATTGCAACATCCTTCCTCACGCGCTTCCAATCCCTAGG
CCCACAAACCCGCTCCCAAATCCTCGATGCTAATCAACTCCGACTTCTCT
CACTAACACTCAATCGACCCTCACTATTCCCCAACTCCCCATCTCTCTCC
AACACCCCAACCTCCCTGCCGACCGGCACGCCCTTACCCGCCGGATACCA
CCTCGTGTACTTCACCCCCGCATTCTTGGAAAATGAGCTAGGCGCGGACG
GCACCGACACCTCATATAACCCTGCGTCGCCGTTCACGCGTCGCATGTGG
GCCGGCGGGGAGGTGCATTGGCCGAGGGGAAAGGACGGCAAGCCGAATTA
CTTAAGGGTAGGGCAGGAGGTGCAGGAGACGACGAGGGTGCTTAGTGCGG
AGCCGAAGGTCGTGAGGAAGACAGGGGAGGAGATGATTGTTGTGGGTGTA
GAGAAGGAGTTTAGGAATGAGGATGGGGTGGCGGTTTTGGATAGGAGGAA
CTGGGTCTTTCGCAAAGCTCTTACCTCGCCGTCGCCTACGAGTTCATCTA
CACCCCCGGCGACGAAGGCATTTAATGGACCAGCTAGTTCGTCTACGGAG
ACGAGTGAAAATGTGCACACGCGCACATTGCGCCAAACGGCAGTGACATT
GTTCCGGTTCTCCGCGTTGACGTTCAATCCGCACAAGATCCATTACTCGA
CACCGTGGGCGAGAGATGTCGAGGGTCATAAGGATATTGTTGTGCATGGA
CCGTTGAATCTCATTTCGATTTTGCATCTGTGGCGCGATACGAGGAAGAA
TGGAAGTGGGGAGGAGGTGGTTCTTCCGGAGAAGATCTCGTACAGGGCGA
CGAGTCCGCTGTATGCGGAGGAGGAGTATCGGATTGTGTTGGAAGATGGA
GAGGATGGGATCGGGAGGGTGCAGATTGTTGCGCCAGGGGAGGTGGTGGC
TATGAAGGCGGAGATTCAGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005265KJC3_005265Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005265-T1.utr5p1KJC3_005265-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005265-T1.exon1KJC3_005265-T1.exon1Aspergillus niger KJC3exon
KJC3_005265-T1.exon2KJC3_005265-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005265-T1.cdsKJC3_005265-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005265-T1.utr3p1KJC3_005265-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005265-T1KJC3_005265-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029069
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2130794..2132194 +
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