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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2145022..2146295+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005272-T1 ID=KJC3_005272-T1|Name=KJC3_005272-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1274bp|location=Sequence derived from alignment at ch4:2145022..2146295+ (Aspergillus niger KJC3)
ATGTTCCTCGCCTCACTCCCCCCCAACACCCCCATCACCGTCACCATCAC
CGGCACCCAACCCCACACCCCTCCTACCCTCACCACCGAACTATCCTCTC
TCTTCGCCTCCGCCGCCTCCGACTCTCTCTGCGCCCATACCGAAACTCTC
CACCAGCACCACACCTCCCCTACAAGCATCATCCATCTAACCTACTGGTC
CACAACAAACTACGAGACCTGGCTCAAATCCCCCAAAGTCTCCGCCTTTT
TCGCCTCCCTTCCCAGCAATCAAGAAGATGAAGCACCAGGAATCTACCAT
GAAACCCTAACCATCCAGCCATCTCGCATCCAAGGGGCCACGAACCACCC
CGTGCCCTCGGGATGTATGCACTTGGGCAAGATTGACCTCAAGCCAGAGT
TGTCGGGGTACTGGGGGTGTTATCCGGATCGTATCCAAGAAAAGGATATA
AAAACTTCTCTAACCAAGGAAGAGGTTGTTGCTGTTGCTGAAAGCAAGAA
TGCTAAAGAAGAGGGGGAAATAATCCCAGGAAAACAGACCATCACACATA
TACCCGATAATATCTGCTTCGTCGTCGAAGGCCAAGACCACTCCGCCGCG
TCGGAGGAAGAACGCACTTACTGGAGCGAACGCTTCGATTCCTTGTCCCA
GGAATGGGTGGGCCAGGTGCTGGGTGCGGGATTACCCGGGGGAGTGGTTT
CTTCGAGGGGGTGTTATAGTTCTTCTGTGCCTTCTACTATCTCTACTTCT
GAGGGGGTGAAGAGGTATCCGTTGACGCTTGGGAGGGATGTTCAGCTTCT
TTACTTTGTGGATTTGCAGCATATGGAGACGTTGGGGAGGAAGAGTGCCG
AGCATGTGAAGCTTAGGAAGGCGTTTATGGAGGCGTATGGGCCTGGGGGT
GTGTTGTTTGGAGGGGGGTTGAAGTTGTGGGTTGAGACGGCGGTGTTGAG
GGACGGGGATTTCAAGGGCGAGTATTGGGGCTGTGAGAAGGGGACGGGGT
TGTTGGGGGTAAGGGGAGTGATGGGGGTTGAGTGATTTAGTGTGTATATG
CAATGGGGATCTTGTTCGCATGGCAGTTGTTGATATTCAACGGTGGTGAT
ATGGTGGAGAAAATTTATTGAAGCAAATTCTATATCATGATGTATCTTGG
TCCGTCTGGAGGGTTTCATGCAGATGGGTATGGAGATGGGAATTGGCGTA
CACACTTAATGCTCTGTATCCGTATGCGTCTACTTATGGTACCCAATGAA
TGCAGTTTGATAAAGCTATAGTCA back to topCoding sequence (CDS) from alignment at ch4:2145022..2146295+ >KJC3_005272-T1 ID=KJC3_005272-T1|Name=KJC3_005272-T1|organism=Aspergillus niger KJC3|type=CDS|length=1035bp|location=Sequence derived from alignment at ch4:2145022..2146295+ (Aspergillus niger KJC3)
ATGTTCCTCGCCTCACTCCCCCCCAACACCCCCATCACCGTCACCATCAC
CGGCACCCAACCCCACACCCCTCCTACCCTCACCACCGAACTATCCTCTC
TCTTCGCCTCCGCCGCCTCCGACTCTCTCTGCGCCCATACCGAAACTCTC
CACCAGCACCACACCTCCCCTACAAGCATCATCCATCTAACCTACTGGTC
CACAACAAACTACGAGACCTGGCTCAAATCCCCCAAAGTCTCCGCCTTTT
TCGCCTCCCTTCCCAGCAATCAAGAAGATGAAGCACCAGGAATCTACCAT
GAAACCCTAACCATCCAGCCATCTCGCATCCAAGGGGCCACGAACCACCC
CGTGCCCTCGGGATGTATGCACTTGGGCAAGATTGACCTCAAGCCAGAGT
TGTCGGGGTACTGGGGGTGTTATCCGGATCGTATCCAAGAAAAGGATATA
AAAACTTCTCTAACCAAGGAAGAGGTTGTTGCTGTTGCTGAAAGCAAGAA
TGCTAAAGAAGAGGGGGAAATAATCCCAGGAAAACAGACCATCACACATA
TACCCGATAATATCTGCTTCGTCGTCGAAGGCCAAGACCACTCCGCCGCG
TCGGAGGAAGAACGCACTTACTGGAGCGAACGCTTCGATTCCTTGTCCCA
GGAATGGGTGGGCCAGGTGCTGGGTGCGGGATTACCCGGGGGAGTGGTTT
CTTCGAGGGGGTGTTATAGTTCTTCTGTGCCTTCTACTATCTCTACTTCT
GAGGGGGTGAAGAGGTATCCGTTGACGCTTGGGAGGGATGTTCAGCTTCT
TTACTTTGTGGATTTGCAGCATATGGAGACGTTGGGGAGGAAGAGTGCCG
AGCATGTGAAGCTTAGGAAGGCGTTTATGGAGGCGTATGGGCCTGGGGGT
GTGTTGTTTGGAGGGGGGTTGAAGTTGTGGGTTGAGACGGCGGTGTTGAG
GGACGGGGATTTCAAGGGCGAGTATTGGGGCTGTGAGAAGGGGACGGGGT
TGTTGGGGGTAAGGGGAGTGATGGGGGTTGAGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005272-T1.utr3p1 | KJC3_005272-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR025702 |
| DBxref | PFAM:PF13816 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2145022..2146295 + |
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