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KJC3_005396-T1, KJC3_005396-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005396-T1
Unique NameKJC3_005396-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2599538..2600617+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005396-T1 ID=KJC3_005396-T1|Name=KJC3_005396-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1080bp|location=Sequence derived from alignment at ch4:2599538..2600617+ (Aspergillus niger KJC3)
ATGTATGGACCAGGAGTGCCCTTGTATCTCTCCTACTTTTATCCGCGTGA
GAAACTCGGCCTCCGGACTGGCATATTCTTATCAGGAGCCGCTCTAGCAA
ACGCATATGGGAGTGCCCTGGCGTATGGAATTTCCCAGGCCAAAGGGTCA
ATCGGACCATGGAGGATCCTATTCATCGTGGAAGGTGTGCCGTCATGCCT
TCTGGCCATGGTTGCTTGGTTTTGTCTGCCTGATTCACCCAAGACAGCCA
AGTTTCTTGATGAACGGGAGCAAGAAATTGCGGTTGCACTCTCCCTACGA
CAACCTGGGGATCGAGAAACCCATGGTCTGCAGTTGAAGCAAGTGCTGGG
ATCCTTGCTTGATTATACGAGTAAGAACGGTTACCCAAAGGCATCAATTC
TCCAGTGCCCTGTCTTCTAATGCATCCAAATAGGCTACCCCCCAGCACTA
ATGTACTTTGGATGCAATGTGTGCTTCGCCTCACTCCCATTATTCGTGCC
GACCATCATCTCCGAAATGGGGGCTTTCACAACTATCCAATCAAACGGTC
TCAGCGCACCTCCATATGTTCTATGCTGGATAGCCATTGTTGTCTGCGCA
TTTCTGTCGGATCGCGTCAACTTGCGGGGGCCCTTCATCGTGGGTGGCGC
ACTCATAGCTGCCATCGGATACATTGTGCTAGCTACGCAGACCACGGTGG
CAGTCAGGTACTTTGGCCTGTTCCTGGCGACCCAGGTCTTTGTGTCCGTA
GCTCTCATTCTCACTTGGGTCGGTAATACACACGCCACGGACTCCAAGCG
CGCCGGAGCCTTTGCCATCCTGGCTACTGGCGGCCAATGCGGTCCGATCC
TAGGGACGAATGTCTTTCCCGACAGTGACAAACCATACTATCGCAAGGGG
ATGTGGATCTCGTGTGGCGCATGCCTGATCGTGGTGATTATGGGATGTTG
GCAGATGTATCTGCTATGGCGGGCGAATCGGCATCTGGATAGGGAGTATG
AGCAAGATGGGGGCGATTTGAGTGGCAACCAGTCTGAGGGGAAGAACGAA
GCTGACAAGCCATTTCGGTATATTTTATGA
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Coding sequence (CDS) from alignment at ch4:2599538..2600617+

>KJC3_005396-T1 ID=KJC3_005396-T1|Name=KJC3_005396-T1|organism=Aspergillus niger KJC3|type=CDS|length=2034bp|location=Sequence derived from alignment at ch4:2599538..2600617+ (Aspergillus niger KJC3)
ATGTATGGACCAGGAGTGCCCTTGTATCTCTCCTACTTTTATCCGCGTGA
GAAACTCGGCCTCCGGACTGGCATATTCTTATCAGGAGCCGCTCTAGCAA
ACGCATATGGGAGTGCCCTGGCGTATGGAATTTCCCAGGCCAAAGGGTCA
ATCGGACCATGGAGGATCCTATTCATCGTGGAAGGTGTGCCGTCATGCCT
TCTGGCCATGGTTGCTTGGTTTTGTCTGCCTGATTCACCCAAGACAGCCA
AGTTTCTTGATGAACGGGAGCAAGAAATTGCGGTTGCACTCTCCCTACGA
CAACCTGGGGATCGAGAAACCCATGGTCTGCAGTTGAAGCAAGTGCTGGG
ATCCTTGCTTGATTATACGAGCTACCCCCCAGCACTAATGTACTTTGGAT
GCAATGTGTGCTTCGCCTCACTCCCATTATTCGTGCCGACCATCATCTCC
GAAATGGGGGCTTTCACAACTATCCAATCAAACGGTCTCAGCGCACCTCC
ATATGTTCTATGCTGGATAGCCATTGTTGTCTGCGCATTTCTGTCGGATC
GCGTCAACTTGCGGGGGCCCTTCATCGTGGGTGGCGCACTCATAGCTGCC
ATCGGATACATTGTGCTAGCTACGCAGACCACGGTGGCAGTCAGGTACTT
TGGCCTGTTCCTGGCGACCCAGGTCTTTGTGTCCGTAGCTCTCATTCTCA
CTTGGGTCGGTAATACACACGCCACGGACTCCAAGCGCGCCGGAGCCTTT
GCCATCCTGGCTACTGGCGGCCAATGCGGTCCGATCCTAGGGACGAATGT
CTTTCCCGACAGTGACAAACCATACTATCGCAAGGGGATGTGGATCTCGT
GTGGCGCATGCCTGATCGTGGTGATTATGGGATGTTGGCAGATGTATCTG
CTATGGCGGGCGAATCGGCATCTGGATAGGGAGTATGAGCAAGATGGGGG
CGATTTGAGTGGCAACCAGTCTGAGGGGAAGAACGAAGCTGACAAGCCAT
TTCGGTATATTTTATGAATGTATGGACCAGGAGTGCCCTTGTATCTCTCC
TACTTTTATCCGCGTGAGAAACTCGGCCTCCGGACTGGCATATTCTTATC
AGGAGCCGCTCTAGCAAACGCATATGGGAGTGCCCTGGCGTATGGAATTT
CCCAGGCCAAAGGGTCAATCGGACCATGGAGGATCCTATTCATCGTGGAA
GGTGTGCCGTCATGCCTTCTGGCCATGGTTGCTTGGTTTTGTCTGCCTGA
TTCACCCAAGACAGCCAAGTTTCTTGATGAACGGGAGCAAGAAATTGCGG
TTGCACTCTCCCTACGACAACCTGGGGATCGAGAAACCCATGGTCTGCAG
TTGAAGCAAGTGCTGGGATCCTTGCTTGATTATACGAGCTACCCCCCAGC
ACTAATGTACTTTGGATGCAATGTGTGCTTCGCCTCACTCCCATTATTCG
TGCCGACCATCATCTCCGAAATGGGGGCTTTCACAACTATCCAATCAAAC
GGTCTCAGCGCACCTCCATATGTTCTATGCTGGATAGCCATTGTTGTCTG
CGCATTTCTGTCGGATCGCGTCAACTTGCGGGGGCCCTTCATCGTGGGTG
GCGCACTCATAGCTGCCATCGGATACATTGTGCTAGCTACGCAGACCACG
GTGGCAGTCAGGTACTTTGGCCTGTTCCTGGCGACCCAGGTCTTTGTGTC
CGTAGCTCTCATTCTCACTTGGGTCGGTAATACACACGCCACGGACTCCA
AGCGCGCCGGAGCCTTTGCCATCCTGGCTACTGGCGGCCAATGCGGTCCG
ATCCTAGGGACGAATGTCTTTCCCGACAGTGACAAACCATACTATCGCAA
GGGGATGTGGATCTCGTGTGGCGCATGCCTGATCGTGGTGATTATGGGAT
GTTGGCAGATGTATCTGCTATGGCGGGCGAATCGGCATCTGGATAGGGAG
TATGAGCAAGATGGGGGCGATTTGAGTGGCAACCAGTCTGAGGGGAAGAA
CGAAGCTGACAAGCCATTTCGGTATATTTTATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005396KJC3_005396Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005396-T1.exon1KJC3_005396-T1.exon1Aspergillus niger KJC3exon
KJC3_005396-T1.exon2KJC3_005396-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005396-T1.cdsKJC3_005396-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005396-T1KJC3_005396-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2599538..2600617 +
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