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KJC3_005619-T1, KJC3_005619-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005619-T1
Unique NameKJC3_005619-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3237932..3239476+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005619-T1 ID=KJC3_005619-T1|Name=KJC3_005619-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1545bp|location=Sequence derived from alignment at ch4:3237932..3239476+ (Aspergillus niger KJC3)
GTAAAGTAAGTTGCGGACACATTGGCCATCTCCGCTTTTCCCCCTCTTGA
TTTCTCACCTGCTTTTTCTATCTCGGTCTCTTAATTTGTTTGGGGGTTTT
TGGTCAACTGTGGATGCTGTAGTGAGGCGGTTTCTGTATAAATATTGTAT
TTTCCTGCGATATCTACTACTACTACTACTACTTCTACATCATCGCACAC
GCAAAATGGCCAGCATCGCCGATCTACAAGCCCGCTTGAAAGAGCTCTCA
ACAGCTCTGTCCCACATCCAGCCGCTGGTCTCTCGGTTAAAGGGCTTTAC
GACTGCAGTTGGACAGGGCGATCAGCCGCGATTGGAACTAGGGACGGAGA
TCCATACTCGACTGAAAGAGGCGGAGGAGCAATTGGAGTTGCTGAAGGTC
GAGGTTGAGGCCCTGGAGGCTGCAGCGGATACGCGGCGCAAGGGTGTGGA
TAATGAGAAGGAGTCGGAGAGGGAACGGGTTATTGCCTTGGCTGGACGGT
TGGCGGATGATTTGAAGAGGTAGGTGGAATCGACTGATTGCTCTTCCTGG
ATTGTTTACTAATGGGTATGTTACGGCTTTGGCAGAACGAGAGGAGACTT
CCGGAACGCACAATTACAAGCGAAGCGGAACGCTGAAGTTGCCCGACGGA
AAGAGCGAGAGCTACTGTTTACGAGGTCACAAAGTGCGGAGAGGAAGAAG
CAGTCGAGTGAGAAGCTGACGCAGGATGATATTGTCATGAATGCTTCGAA
TGATGTTACGGCTGCGCTGAGACGGACGCATCAGTTGATGCAGGCGGAGC
TGTCGCGGAGTCAGTTTGCGCAGGAGACGTTAGGTTTGTGCTGGTTTACC
TTGGGTGCAGGTCAGGGTAATGGCTAACATTGGTGGTTTAGATCAATCGA
CTGCTGCGCTGTCCTCGCTGTCAGAATCCTATACAGATCTCGATTCTTTG
ATTTCGTCGTCACGCAATCTCATCGGGTCTTTGCTACGCTCGCAAAAGTC
GGATACTTGGTACCTTGAGACGGCTTTCTACATATTGGTTGGCACCATTA
TTTGGCTTGTCTTCCGGCGGATATTATATGGTCCCCTGTGGTGGCTCGTC
TGGCTGCCTCTCAGGCTGTTCGCGAGGTTCACGTTTGCTATTTTGGGCGC
CGTCGGGATTACCAGTAAGGCTGTTCAGTCTTCTGAACCTAGTACGATGC
TCGAATATGTGCCGCAAGAGACCCCAATGGTTGAGCAGAAGGTGGAGCCG
AACATCCAAAGTGCTGAGGGCGAAGCGGTCTGGGATCAAGTTCCAGTTAC
GGATGAGGCAGAGGAGGACCGCTTAATTGATGAGATCGGCAAAATGGTGG
AAGAAAGCGAGGAGCAAGAGGAGACCAACATTGACGACATCTCAGAAGAG
GAAAGGCAAAGGCAGGCGGAGTTGCCCCGGAACCCTAAGAAGAGGATGTT
CGAGGCTACGGATGTACCACAGCAGAAGGACGAACTATAGACAGAAAGTA
ATGTGTGACGAGAACTGCCAAGCGCAGAAGCGTACCTGCTCATTA
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Coding sequence (CDS) from alignment at ch4:3237932..3239476+

>KJC3_005619-T1 ID=KJC3_005619-T1|Name=KJC3_005619-T1|organism=Aspergillus niger KJC3|type=CDS|length=3483bp|location=Sequence derived from alignment at ch4:3237932..3239476+ (Aspergillus niger KJC3)
ATGGCCAGCATCGCCGATCTACAAGCCCGCTTGAAAGAGCTCTCAACAGC
TCTGTCCCACATCCAGCCGCTGGTCTCTCGGTTAAAGGGCTTTACGACTG
CAGTTGGACAGGGCGATCAGCCGCGATTGGAACTAGGGACGGAGATCCAT
ACTCGACTGAAAGAGGCGGAGGAGCAATTGGAGTTGCTGAAGGTCGAGGT
TGAGGCCCTGGAGGCTGCAGCGGATACGCGGCGCAAGGGTGTGGATAATG
AGAAGGAGTCGGAGAGGGAACGGGTTATTGCCTTGGCTGGACGGTTGGCG
GATGATTTGAAGAGAACGAGAGGAGACTTCCGGAACGCACAATTACAAGC
GAAGCGGAACGCTGAAGTTGCCCGACGGAAAGAGCGAGAGCTACTGTTTA
CGAGGTCACAAAGTGCGGAGAGGAAGAAGCAGTCGAGTGAGAAGCTGACG
CAGGATGATATTGTCATGAATGCTTCGAATGATGTTACGGCTGCGCTGAG
ACGGACGCATCAGTTGATGCAGGCGGAGCTGTCGCGGAGTCAGTTTGCGC
AGGAGACGTTAGATCAATCGACTGCTGCGCTGTCCTCGCTGTCAGAATCC
TATACAGATCTCGATTCTTTGATTTCGTCGTCACGCAATCTCATCGGGTC
TTTGCTACGCTCGCAAAAGTCGGATACTTGGTACCTTGAGACGGCTTTCT
ACATATTGGTTGGCACCATTATTTGGCTTGTCTTCCGGCGGATATTATAT
GGTCCCCTGTGGTGGCTCGTCTGGCTGCCTCTCAGGCTGTTCGCGAGGTT
CACGTTTGCTATTTTGGGCGCCGTCGGGATTACCAGTAAGGCTGTTCAGT
CTTCTGAACCTAGTACGATGCTCGAATATGTGCCGCAAGAGACCCCAATG
GTTGAGCAGAAGGTGGAGCCGAACATCCAAAGTGCTGAGGGCGAAGCGGT
CTGGGATCAAGTTCCAGTTACGGATGAGGCAGAGGAGGACCGCTTAATTG
ATGAGATCGGCAAAATGGTGGAAGAAAGCGAGGAGCAAGAGGAGACCAAC
ATTGACGACATCTCAGAAGAGGAAAGGCAAAGGCAGGCGGAGTTGCCCCG
GAACCCTAAGAAGAGGATGTTCGAGGCTACGGATGTACCACAGCAGAAGG
ACGAACTATAGATGGCCAGCATCGCCGATCTACAAGCCCGCTTGAAAGAG
CTCTCAACAGCTCTGTCCCACATCCAGCCGCTGGTCTCTCGGTTAAAGGG
CTTTACGACTGCAGTTGGACAGGGCGATCAGCCGCGATTGGAACTAGGGA
CGGAGATCCATACTCGACTGAAAGAGGCGGAGGAGCAATTGGAGTTGCTG
AAGGTCGAGGTTGAGGCCCTGGAGGCTGCAGCGGATACGCGGCGCAAGGG
TGTGGATAATGAGAAGGAGTCGGAGAGGGAACGGGTTATTGCCTTGGCTG
GACGGTTGGCGGATGATTTGAAGAGAACGAGAGGAGACTTCCGGAACGCA
CAATTACAAGCGAAGCGGAACGCTGAAGTTGCCCGACGGAAAGAGCGAGA
GCTACTGTTTACGAGGTCACAAAGTGCGGAGAGGAAGAAGCAGTCGAGTG
AGAAGCTGACGCAGGATGATATTGTCATGAATGCTTCGAATGATGTTACG
GCTGCGCTGAGACGGACGCATCAGTTGATGCAGGCGGAGCTGTCGCGGAG
TCAGTTTGCGCAGGAGACGTTAGATCAATCGACTGCTGCGCTGTCCTCGC
TGTCAGAATCCTATACAGATCTCGATTCTTTGATTTCGTCGTCACGCAAT
CTCATCGGGTCTTTGCTACGCTCGCAAAAGTCGGATACTTGGTACCTTGA
GACGGCTTTCTACATATTGGTTGGCACCATTATTTGGCTTGTCTTCCGGC
GGATATTATATGGTCCCCTGTGGTGGCTCGTCTGGCTGCCTCTCAGGCTG
TTCGCGAGGTTCACGTTTGCTATTTTGGGCGCCGTCGGGATTACCAGTAA
GGCTGTTCAGTCTTCTGAACCTAGTACGATGCTCGAATATGTGCCGCAAG
AGACCCCAATGGTTGAGCAGAAGGTGGAGCCGAACATCCAAAGTGCTGAG
GGCGAAGCGGTCTGGGATCAAGTTCCAGTTACGGATGAGGCAGAGGAGGA
CCGCTTAATTGATGAGATCGGCAAAATGGTGGAAGAAAGCGAGGAGCAAG
AGGAGACCAACATTGACGACATCTCAGAAGAGGAAAGGCAAAGGCAGGCG
GAGTTGCCCCGGAACCCTAAGAAGAGGATGTTCGAGGCTACGGATGTACC
ACAGCAGAAGGACGAACTATAGATGGCCAGCATCGCCGATCTACAAGCCC
GCTTGAAAGAGCTCTCAACAGCTCTGTCCCACATCCAGCCGCTGGTCTCT
CGGTTAAAGGGCTTTACGACTGCAGTTGGACAGGGCGATCAGCCGCGATT
GGAACTAGGGACGGAGATCCATACTCGACTGAAAGAGGCGGAGGAGCAAT
TGGAGTTGCTGAAGGTCGAGGTTGAGGCCCTGGAGGCTGCAGCGGATACG
CGGCGCAAGGGTGTGGATAATGAGAAGGAGTCGGAGAGGGAACGGGTTAT
TGCCTTGGCTGGACGGTTGGCGGATGATTTGAAGAGAACGAGAGGAGACT
TCCGGAACGCACAATTACAAGCGAAGCGGAACGCTGAAGTTGCCCGACGG
AAAGAGCGAGAGCTACTGTTTACGAGGTCACAAAGTGCGGAGAGGAAGAA
GCAGTCGAGTGAGAAGCTGACGCAGGATGATATTGTCATGAATGCTTCGA
ATGATGTTACGGCTGCGCTGAGACGGACGCATCAGTTGATGCAGGCGGAG
CTGTCGCGGAGTCAGTTTGCGCAGGAGACGTTAGATCAATCGACTGCTGC
GCTGTCCTCGCTGTCAGAATCCTATACAGATCTCGATTCTTTGATTTCGT
CGTCACGCAATCTCATCGGGTCTTTGCTACGCTCGCAAAAGTCGGATACT
TGGTACCTTGAGACGGCTTTCTACATATTGGTTGGCACCATTATTTGGCT
TGTCTTCCGGCGGATATTATATGGTCCCCTGTGGTGGCTCGTCTGGCTGC
CTCTCAGGCTGTTCGCGAGGTTCACGTTTGCTATTTTGGGCGCCGTCGGG
ATTACCAGTAAGGCTGTTCAGTCTTCTGAACCTAGTACGATGCTCGAATA
TGTGCCGCAAGAGACCCCAATGGTTGAGCAGAAGGTGGAGCCGAACATCC
AAAGTGCTGAGGGCGAAGCGGTCTGGGATCAAGTTCCAGTTACGGATGAG
GCAGAGGAGGACCGCTTAATTGATGAGATCGGCAAAATGGTGGAAGAAAG
CGAGGAGCAAGAGGAGACCAACATTGACGACATCTCAGAAGAGGAAAGGC
AAAGGCAGGCGGAGTTGCCCCGGAACCCTAAGAAGAGGATGTTCGAGGCT
ACGGATGTACCACAGCAGAAGGACGAACTATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006890retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
Vocabulary: Molecular Function
TermDefinition
GO:0005484SNAP receptor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005619KJC3_005619Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005619-T1KJC3_005619-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005619-T1.utr5p1KJC3_005619-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005619-T1.exon1KJC3_005619-T1.exon1Aspergillus niger KJC3exon
KJC3_005619-T1.exon2KJC3_005619-T1.exon2Aspergillus niger KJC3exon
KJC3_005619-T1.exon3KJC3_005619-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005619-T1.cdsKJC3_005619-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005619-T1.utr3p1KJC3_005619-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR005606
DBxrefPFAM:PF03908
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3237932..3239476 +
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