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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3288451..3291034+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005636-T1 ID=KJC3_005636-T1|Name=KJC3_005636-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2584bp|location=Sequence derived from alignment at ch4:3288451..3291034+ (Aspergillus niger KJC3)
TATTTTTTTCTGATTTTCCCAATTTTTACACATGGACTGCGCCCCAAACT
CCTTGGGATCTAGGGATGAACGGCCGGACCAGCCAGACGGAGCTTGACGA
GCTGCATATGGCGACCCTCCCTGATGGATCCCATCACATCCGCTGCTGAG
TCCTTGTCGTCGGCCTCGTTCTCCTCTTCCTTCTTCCTCTGATAATGATT
ATCATTATTATTAAACCCATCTCCCTTTCACTCCATCCCATCATCTCCCT
TTCCTCTCCCTCTTCTTCTCCCTTCTCCCCTTCGTCCATCCCCATTCCTT
TACTTCCCCCCTCGTTCTCTTCTTGCTGAACCATGGTCCCGGCGGGTTCT
TTATCTCTACACTGCCGGATAAAGACAGTGGCTACAGGCTGACTTGCACG
GGTGACGGTCGTGTGATTGTTTGCTTGCCTGCTTGCTGGCCTGTCATCCT
GGACGCCAAAAAAAGGTTAAAATCGCATCAAGGCCGGCGACTGGCGAGCA
AAGTCGAAAAAGCAACGACGCTGGCCGTGTTCGGGTCACAATTTTGGTAC
TTCGCCAACGGAGAACATCCCAATCGGGCCCAATTTCCCCCCGGCTGGTG
CCTTTCACAAGTTATCTTTCTCGTCTTCGGCTTCTTTCTCTTCACTCCTT
CTGCTTCTTGGTTCTGCTTGTCTTTCCCTTGCCACGTTCTCTCCTCTTTC
TTTCCCCCCATCCTTCAGGAGGGGGAAAGGTCTTTTGAGACATCCCTTCC
CTCCCTTCGTGTCAACTCTATAAACTATCTCCTACCACTGCGAACGATAT
ACTTCCCAGTTCCTGGCCCGAGCCACGGGAATATCTCTCCCCACTGCCAA
CCTCCCCCTCATCTACTATCAGCACATCGTCATGCTTTCTCCGTCCTCGT
TGGCACTTCCTAGACAGGCCCCTCCAGTGAGGCCCTCTCGGTCCCTGGAG
GGGCTGGAGCAAGTCGTCCCTCCTCGAGTGCCAGTGCCCCCCGCTCGCCC
GGCACTGCGACATATTGATAAGCCGCTCCCTGAGCTGCCCCCCAAGCCAC
TGCCTGAGACCCCGTCGATGGATGAGGGCTCCACTGCATGGAGCGATGAC
AGTAGTACCATCTCCAGCTTCTACGATGACAGCCGACGCTTTTCGGCGGA
TTCGTCCGAGAGTTACCCTGTTTTTGTCCGCTCTGGTTCGGACGATCTGT
CCGAGCTTGTCGATCATCCACCCACTGCCGGGCCCATCGACCCGTACCAG
CACGACGACCATCACCATCACCACCACCACAATGACCATCCAAAGTCCGC
ACCCTTCGCCATCACCACCACCTTCCTCCACGATGACCACTCCGACCGGG
CCCAACCTTGGGTCACCAACCGGGCTGGCCCCAACCATTACTTCCGGGAG
AAGAAATGGGATTTCTTCCCTGAGCTGGCTACTCCGTCGGCTCTCCCGAC
ATCCCCGCGTTTTCCAACTCACCCCCGCAAAAAGAACGGCAGTAAACTGA
ACCTCACCGTGTTTGACTTCACCAAAAGCCGCACCCTTTTGAACTCATCG
GATCGGAGTGGACGAGCTCTTGCTCAGGATGTGCGCAATTCTATTCGCTC
CTACGTGCAACGACGGTTGTCGAAAAATTCGCTGGAACGAAACAAGAGTA
GTCGGTCCTCACCCCCCACAGCAGATTCAGTGGATCCTGTGCGCACCCCC
ACTCCATCGAGCAAGATCACCACAACCGACGAGATTTATCATCCTGGAAG
CCCAAAGTCCCCTCTAAGCCCAGTGGATGTCTTACCCTCGAATAAACGCC
TATCGCGCATGTCCACTCGCTCAACCATGGGTGCGCGCGGGCCGCACCCG
CGACCCCATGCGTCCCAACGGAAGAAGCAGCTGGCAGTGCCTATGTCGCC
GTATCAGAAGTACGGTGCTGCGATCTGGGAGAAGCCAGGTCGCGAGAAGC
GAATCAGTTACCGACAGAGCCATAACGTCCGGTTTCCCCGCTATCGGAAA
CGAGGCTCATCAAAGAAGGGCTTTGTGTCCTCCGCAACGCCACCCCTGAC
GCCACCCGCCCGGTCTCAACTCCAGCAGAACACTCGGGACTGCGTCCGAG
CCATTCAAGATGGCACGCATCATATCCTCGACGCCCTTGACGGCGCCAGG
AAGAAGATGATCGGGGTGCGCGGCGATCGACGGCACACAGAGCTGAAGTC
ACAGATTCGACTGGTTGGACCGGTCAGTCCATATAACAACAATTACAGAC
AGACCGATCCCTGGATTTAGAACGAAGGGCTCACTGTCTCTCTCCAACTT
TCATTTCTCGTTTCGTCTCGTTTCCTTTCTATGTTCATGATATCCCATTC
GCTTCATGGTCCATGTTATCCAATTAGCCTGTCTCTATTCCCGGTCACTC
TCTACGTCCTATAACTCTCGTCTTGTCCTGCAGCTCTAGTCATTACCGTG
ATATCCCGTTGGCATTTTCAGGGTCTCTGCTTGGCGTTGGGGATACACCT
ATAGATGCTTATCTATAGCTACTTCACTTTTTGATCCATTACATTGAGGA
TACTAGCTTATAATGACCCAATATCAAATCTTAC back to topCoding sequence (CDS) from alignment at ch4:3288451..3291034+ >KJC3_005636-T1 ID=KJC3_005636-T1|Name=KJC3_005636-T1|organism=Aspergillus niger KJC3|type=CDS|length=1389bp|location=Sequence derived from alignment at ch4:3288451..3291034+ (Aspergillus niger KJC3)
ATGCTTTCTCCGTCCTCGTTGGCACTTCCTAGACAGGCCCCTCCAGTGAG
GCCCTCTCGGTCCCTGGAGGGGCTGGAGCAAGTCGTCCCTCCTCGAGTGC
CAGTGCCCCCCGCTCGCCCGGCACTGCGACATATTGATAAGCCGCTCCCT
GAGCTGCCCCCCAAGCCACTGCCTGAGACCCCGTCGATGGATGAGGGCTC
CACTGCATGGAGCGATGACAGTAGTACCATCTCCAGCTTCTACGATGACA
GCCGACGCTTTTCGGCGGATTCGTCCGAGAGTTACCCTGTTTTTGTCCGC
TCTGGTTCGGACGATCTGTCCGAGCTTGTCGATCATCCACCCACTGCCGG
GCCCATCGACCCGTACCAGCACGACGACCATCACCATCACCACCACCACA
ATGACCATCCAAAGTCCGCACCCTTCGCCATCACCACCACCTTCCTCCAC
GATGACCACTCCGACCGGGCCCAACCTTGGGTCACCAACCGGGCTGGCCC
CAACCATTACTTCCGGGAGAAGAAATGGGATTTCTTCCCTGAGCTGGCTA
CTCCGTCGGCTCTCCCGACATCCCCGCGTTTTCCAACTCACCCCCGCAAA
AAGAACGGCAGTAAACTGAACCTCACCGTGTTTGACTTCACCAAAAGCCG
CACCCTTTTGAACTCATCGGATCGGAGTGGACGAGCTCTTGCTCAGGATG
TGCGCAATTCTATTCGCTCCTACGTGCAACGACGGTTGTCGAAAAATTCG
CTGGAACGAAACAAGAGTAGTCGGTCCTCACCCCCCACAGCAGATTCAGT
GGATCCTGTGCGCACCCCCACTCCATCGAGCAAGATCACCACAACCGACG
AGATTTATCATCCTGGAAGCCCAAAGTCCCCTCTAAGCCCAGTGGATGTC
TTACCCTCGAATAAACGCCTATCGCGCATGTCCACTCGCTCAACCATGGG
TGCGCGCGGGCCGCACCCGCGACCCCATGCGTCCCAACGGAAGAAGCAGC
TGGCAGTGCCTATGTCGCCGTATCAGAAGTACGGTGCTGCGATCTGGGAG
AAGCCAGGTCGCGAGAAGCGAATCAGTTACCGACAGAGCCATAACGTCCG
GTTTCCCCGCTATCGGAAACGAGGCTCATCAAAGAAGGGCTTTGTGTCCT
CCGCAACGCCACCCCTGACGCCACCCGCCCGGTCTCAACTCCAGCAGAAC
ACTCGGGACTGCGTCCGAGCCATTCAAGATGGCACGCATCATATCCTCGA
CGCCCTTGACGGCGCCAGGAAGAAGATGATCGGGGTGCGCGGCGATCGAC
GGCACACAGAGCTGAAGTCACAGATTCGACTGGTTGGACCGGTCAGTCCA
TATAACAACAATTACAGACAGACCGATCCCTGGATTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005636-T1.utr5p1 | KJC3_005636-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005636-T1.utr3p1 | KJC3_005636-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3288451..3291034 + |
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