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KJC3_005693-T1, KJC3_005693-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005693-T1
Unique NameKJC3_005693-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3449007..3450316-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005693-T1 ID=KJC3_005693-T1|Name=KJC3_005693-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1310bp|location=Sequence derived from alignment at ch4:3449007..3450316- (Aspergillus niger KJC3)
ATGGAGTATATCAGCAGCGCTCTCTACTACGTCTTTCATCCATATCAATT
GAGAGATATTCTGAAATGGTGGTTATCACTCACCCATTAACCTACTATTG
ATAGCTGACGGGAGGCATGCTACGGTCATAGGAAAATCCAGCACAATCAA
ATCTATCGATTGAATCTGGGGAATGAGAGTGAATCCCGGAAGGTCTGTTT
CAAGTTCCTCGATCAGACCGGCCGGAGCTTCAGTGCCGTTATCAAGGAGC
TCCACCCCGAACTGCTCGTCCCTATTTGTATCTTCTACCTGGTCCTCCGT
GGTCTCGACACCATAGAAGACGACCCTTCTATTTCTGTGAAGGCTAAGGC
TGCCTTGCTTCGCGGCTTCGAGGATGTATTGGTGAAGGACGGGTGGACAT
ACGATGGCAACCGTCCCGAAGAGAAGGACCGCGAACTGCTTGTTCACTTC
CACCACGTTATCAACGAGTACAAAGCTTTGAAGCCAGCCTGCAGACTTAT
TATCAAGGACATCACCAGGGTAATGGGTAATGGAATGGCCGACTTCTGTC
ACAAGGTTACCCTGAACAATCCTGATAAAGCCGGTGTCATGACTATAGTC
GAGTATGATCTGTACTGCTATTATGTTGCCGGCTGTGTCGGCGAGGGCCT
TACCCGCTCCTTCATCGAAGCGCAACTTTGCAACTCGTCGTTGCTCGACT
ACCCGAAGTTATCCCGGTCAATGGGTGCCTTCCTCCAGAAGACCAACATC
ATCCGCGACGTCAGTGAAGATCACGGAGACCACCGTTGCTTTTGGCCCAA
ACAGATATGGTCTAAGTACGTCAGCGACTTTGCAGATCTATTTAAGCCAG
AAAATTGTGAGGCGGCCTTAGACTGCAGTTCTGAGATGGTTCTTAACGCA
CTAGAACATGCCAAGGACTGTCTTGTCTATCTGGCTGGGTTGAATGAGCA
GAGCATCTTTAATTTCTGCGCTGTACCCCAGAGCATGGCTATCGCGACGC
TAGAGCTGTGCTTCCGCAATCCCGCTCTGTTTGAGCGGGATGTCAATATT
AAGATCAGCAGAGGTGATGCATGTCAGCTGATGTTCGAGTGCACACAGGG
CCTGCCGGGGCTGTGTCGTATTGTCAGTCGATATGCACGACGCATCAAAA
CCAAGAATTCATTAAGTGCCACCAATCTTTCCGAAATAAATACGGTGTGC
GATACGGTATGTTATCTCATTTATACTTCAGAGTGAGCGAGTCCTAACAA
CCATAGATTGAGAAAGCGGTCGAAGAATTATTTCATCCGGAAGAAGGACA
AACTCATTAG
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Coding sequence (CDS) from alignment at ch4:3449007..3450316-

>KJC3_005693-T1 ID=KJC3_005693-T1|Name=KJC3_005693-T1|organism=Aspergillus niger KJC3|type=CDS|length=3591bp|location=Sequence derived from alignment at ch4:3449007..3450316- (Aspergillus niger KJC3)
ATTGAGAAAGCGGTCGAAGAATTATTTCATCCGGAAGAAGGACAAACTCA
TTAGGAAAATCCAGCACAATCAAATCTATCGATTGAATCTGGGGAATGAG
AGTGAATCCCGGAAGGTCTGTTTCAAGTTCCTCGATCAGACCGGCCGGAG
CTTCAGTGCCGTTATCAAGGAGCTCCACCCCGAACTGCTCGTCCCTATTT
GTATCTTCTACCTGGTCCTCCGTGGTCTCGACACCATAGAAGACGACCCT
TCTATTTCTGTGAAGGCTAAGGCTGCCTTGCTTCGCGGCTTCGAGGATGT
ATTGGTGAAGGACGGGTGGACATACGATGGCAACCGTCCCGAAGAGAAGG
ACCGCGAACTGCTTGTTCACTTCCACCACGTTATCAACGAGTACAAAGCT
TTGAAGCCAGCCTGCAGACTTATTATCAAGGACATCACCAGGGTAATGGG
TAATGGAATGGCCGACTTCTGTCACAAGGTTACCCTGAACAATCCTGATA
AAGCCGGTGTCATGACTATAGTCGAGTATGATCTGTACTGCTATTATGTT
GCCGGCTGTGTCGGCGAGGGCCTTACCCGCTCCTTCATCGAAGCGCAACT
TTGCAACTCGTCGTTGCTCGACTACCCGAAGTTATCCCGGTCAATGGGTG
CCTTCCTCCAGAAGACCAACATCATCCGCGACGTCAGTGAAGATCACGGA
GACCACCGTTGCTTTTGGCCCAAACAGATATGGTCTAAGTACGTCAGCGA
CTTTGCAGATCTATTTAAGCCAGAAAATTGTGAGGCGGCCTTAGACTGCA
GTTCTGAGATGGTTCTTAACGCACTAGAACATGCCAAGGACTGTCTTGTC
TATCTGGCTGGGTTGAATGAGCAGAGCATCTTTAATTTCTGCGCTGTACC
CCAGAGCATGGCTATCGCGACGCTAGAGCTGTGCTTCCGCAATCCCGCTC
TGTTTGAGCGGGATGTCAATATTAAGATCAGCAGAGGTGATGCATGTCAG
CTGATGTTCGAGTGCACACAGGGCCTGCCGGGGCTGTGTCGTATTGTCAG
TCGATATGCACGACGCATCAAAACCAAGAATTCATTAAGTGCCACCAATC
TTTCCGAAATAAATACGGTGTGCGATACGATGGAGTATATCAGCAGCGCT
CTCTACTACGTCTTTCATCCATATCAATTGAGAGATATTCTGAAATGATT
GAGAAAGCGGTCGAAGAATTATTTCATCCGGAAGAAGGACAAACTCATTA
GGAAAATCCAGCACAATCAAATCTATCGATTGAATCTGGGGAATGAGAGT
GAATCCCGGAAGGTCTGTTTCAAGTTCCTCGATCAGACCGGCCGGAGCTT
CAGTGCCGTTATCAAGGAGCTCCACCCCGAACTGCTCGTCCCTATTTGTA
TCTTCTACCTGGTCCTCCGTGGTCTCGACACCATAGAAGACGACCCTTCT
ATTTCTGTGAAGGCTAAGGCTGCCTTGCTTCGCGGCTTCGAGGATGTATT
GGTGAAGGACGGGTGGACATACGATGGCAACCGTCCCGAAGAGAAGGACC
GCGAACTGCTTGTTCACTTCCACCACGTTATCAACGAGTACAAAGCTTTG
AAGCCAGCCTGCAGACTTATTATCAAGGACATCACCAGGGTAATGGGTAA
TGGAATGGCCGACTTCTGTCACAAGGTTACCCTGAACAATCCTGATAAAG
CCGGTGTCATGACTATAGTCGAGTATGATCTGTACTGCTATTATGTTGCC
GGCTGTGTCGGCGAGGGCCTTACCCGCTCCTTCATCGAAGCGCAACTTTG
CAACTCGTCGTTGCTCGACTACCCGAAGTTATCCCGGTCAATGGGTGCCT
TCCTCCAGAAGACCAACATCATCCGCGACGTCAGTGAAGATCACGGAGAC
CACCGTTGCTTTTGGCCCAAACAGATATGGTCTAAGTACGTCAGCGACTT
TGCAGATCTATTTAAGCCAGAAAATTGTGAGGCGGCCTTAGACTGCAGTT
CTGAGATGGTTCTTAACGCACTAGAACATGCCAAGGACTGTCTTGTCTAT
CTGGCTGGGTTGAATGAGCAGAGCATCTTTAATTTCTGCGCTGTACCCCA
GAGCATGGCTATCGCGACGCTAGAGCTGTGCTTCCGCAATCCCGCTCTGT
TTGAGCGGGATGTCAATATTAAGATCAGCAGAGGTGATGCATGTCAGCTG
ATGTTCGAGTGCACACAGGGCCTGCCGGGGCTGTGTCGTATTGTCAGTCG
ATATGCACGACGCATCAAAACCAAGAATTCATTAAGTGCCACCAATCTTT
CCGAAATAAATACGGTGTGCGATACGATGGAGTATATCAGCAGCGCTCTC
TACTACGTCTTTCATCCATATCAATTGAGAGATATTCTGAAATGATTGAG
AAAGCGGTCGAAGAATTATTTCATCCGGAAGAAGGACAAACTCATTAGGA
AAATCCAGCACAATCAAATCTATCGATTGAATCTGGGGAATGAGAGTGAA
TCCCGGAAGGTCTGTTTCAAGTTCCTCGATCAGACCGGCCGGAGCTTCAG
TGCCGTTATCAAGGAGCTCCACCCCGAACTGCTCGTCCCTATTTGTATCT
TCTACCTGGTCCTCCGTGGTCTCGACACCATAGAAGACGACCCTTCTATT
TCTGTGAAGGCTAAGGCTGCCTTGCTTCGCGGCTTCGAGGATGTATTGGT
GAAGGACGGGTGGACATACGATGGCAACCGTCCCGAAGAGAAGGACCGCG
AACTGCTTGTTCACTTCCACCACGTTATCAACGAGTACAAAGCTTTGAAG
CCAGCCTGCAGACTTATTATCAAGGACATCACCAGGGTAATGGGTAATGG
AATGGCCGACTTCTGTCACAAGGTTACCCTGAACAATCCTGATAAAGCCG
GTGTCATGACTATAGTCGAGTATGATCTGTACTGCTATTATGTTGCCGGC
TGTGTCGGCGAGGGCCTTACCCGCTCCTTCATCGAAGCGCAACTTTGCAA
CTCGTCGTTGCTCGACTACCCGAAGTTATCCCGGTCAATGGGTGCCTTCC
TCCAGAAGACCAACATCATCCGCGACGTCAGTGAAGATCACGGAGACCAC
CGTTGCTTTTGGCCCAAACAGATATGGTCTAAGTACGTCAGCGACTTTGC
AGATCTATTTAAGCCAGAAAATTGTGAGGCGGCCTTAGACTGCAGTTCTG
AGATGGTTCTTAACGCACTAGAACATGCCAAGGACTGTCTTGTCTATCTG
GCTGGGTTGAATGAGCAGAGCATCTTTAATTTCTGCGCTGTACCCCAGAG
CATGGCTATCGCGACGCTAGAGCTGTGCTTCCGCAATCCCGCTCTGTTTG
AGCGGGATGTCAATATTAAGATCAGCAGAGGTGATGCATGTCAGCTGATG
TTCGAGTGCACACAGGGCCTGCCGGGGCTGTGTCGTATTGTCAGTCGATA
TGCACGACGCATCAAAACCAAGAATTCATTAAGTGCCACCAATCTTTCCG
AAATAAATACGGTGTGCGATACGATGGAGTATATCAGCAGCGCTCTCTAC
TACGTCTTTCATCCATATCAATTGAGAGATATTCTGAAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004310farnesyl-diphosphate farnesyltransferase activity
GO:0051996squalene synthase activity
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0008610lipid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005693KJC3_005693Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005693-T1KJC3_005693-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005693-T1.cdsKJC3_005693-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005693-T1.exon3KJC3_005693-T1.exon3Aspergillus niger KJC3exon
KJC3_005693-T1.exon2KJC3_005693-T1.exon2Aspergillus niger KJC3exon
KJC3_005693-T1.exon1KJC3_005693-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteantiSMASH:Cluster_4.6
DBxrefInterPro:IPR033904
DBxrefInterPro:IPR019845
DBxrefInterPro:IPR002060
DBxrefInterPro:IPR008949
DBxrefInterPro:IPR006449
DBxrefPFAM:PF00494
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3449007..3450316 -
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