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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3600938..3603998+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005749-T1 ID=KJC3_005749-T1|Name=KJC3_005749-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3061bp|location=Sequence derived from alignment at ch4:3600938..3603998+ (Aspergillus niger KJC3)
CCTCAACTTCGTCTTCAACTCGTCCTCAACTATCCTTGCTACTACTACTT
CTTTACAAAATCTAATCTGCCTGGGGTTTTAGCAACTGAAGGTCTAGCAA
AGACCATGACCTCCTTGTCCCGGCCATGTCCCGATATCTCATTACTCACA
CCCTCCTAGTAGGCAGGACTAGATACCCCTCAGAACTCCAATCTAACTCA
ATATATTCAGAAGGCTGTGGCGCCGAGTGGAGTCGGACTCGTCCAAACTA
CCAGCGCAGTGCCTCCAATTAGGCACTGGCGATTGGAGACTATTATTATC
GAGCAGGGCCAACCGGCTACGTCGGACAGAGCGGGACGTTGCCCATCCAG
TTGTGCTTGGTTGATGAATCCCAGCTAAAAGGCTTAATTACAGCGACTTG
AATCATGCCAGTGATATTCCACTCCTCACTCTTAACCCATCGGACTTCCG
TGTCCTCTTCACAGGGGTGTAATGATAAAGAGCAAATACCAGCCATTGAG
GGAACCCGAGCCTAAGCATTGGCCGGCAGAGCTTCTTGTTCCATCCATTC
TTTGCTGTGGGACATTCGCGCCTGTCCCAACAAGGAAAATATCACCGGGA
CCTCCTCACCATACCCAACAGCATCCACTGACTCGCTGGATGAATCAATT
CACACTTGCTCTGGCCATTACAAGTAATCCTGGTGTAGAAATGATTTGGC
CATTTAGCCTGCCTTCGTCTGGCTAGTCTGCTGTTGCTGGCTTTGAAGCA
AGCCACTGCCGATGGGCACGGTGGATCTCCCGCGCCCCCATCGAGGTCTT
GAAAATCGTGCCAGCTCCCTACCTGTCTTCCCCTATGATCATCATGCCCT
TCTTCCCCTGACTCTCTTTCATATCTTGTGCTCGCCGTTGAGGCGTTATA
TTTGTCAAGCAGCGCTGCCTTTGTGCAGTTTAACACATGTCTCCTGAGCG
CTGAACTATCCGCCCCTTGCGCCATGATTCCGGGCACTCTAACCGTCGCG
CTAGCGGCGTTCCTGTTCCTGGCCTCTGCCTTGGCAGATGTAGGACCCTA
TTTCGACTCCGAACGGTACGAACAGGGTGGCATGGGACCATGGCCTATTG
AGACTTACCGTTCGACTTCCACCGTAGGCGCAGTCGTCAACTTTTTGCAG
TATGGGCCACAATGCAAAGATGACCAGTATTACTTCATCTCTCCGCGCGG
GTATAGCGTGCATAAACCCGGGCCGATGATTCTAGACCAGAAGGGTCGCT
TGGTCTGGACGAAGCCATACGGGCACACCTACAATTTCAATGTCTACAAC
TATAAGGGCCAGGATTATTTAACGTTCTGGGTGGGCGACGACAGTAGGGT
GGGACACGGCGAGGGCACATACTACATGGTACGGCACCACCTCTATTCCG
CATAGTAATGGGGCAAAGCAAGACTAAGGTCTCCAATAAAGCTAGACTCG
TCGTACCAGGAAGCATTCACCCTCAGTGGTGCGAATGGACTCGCAGCAGA
TCTTCACGAGTTCCACATAACCCTCGACGAGACCGCAGTTTACACTATCT
ATGACATCCGCCCGGCAGATATCCGGGTCGCTGGCGGTCCTGAGAATGGC
TGGATATGGGATGGCACGTTCCAAGAAGTTAACATTGAGACGAAAGAACT
CCTCTTCGAATGGCGAGCCTCCGAACACTTCGACATCGCCGACGTCTATA
GAGGTCCCGAAGGCTCGGGGGACGATGAGAAACGCCCGTGGGACTACTTT
CATATCAACAGCATCGACAAAGACGCAAAAGGCAATTTTCTTGTTTCAGC
CCGCTACTGCAACTGCCTGATCTATATCGACGGTCGCACAGGTGAGACTA
TCTGGACTCTAGGCGGCAAGCGAAGCAATTTCACCGATCTTTCAGGCGGC
GCAGCTACTAATTTCACCTGGCAACACCACGCACGCTTCCGCGACAACGG
CACGGCAATCACCCTCCTTGACAATTCATCTCGCGGCAGGGGCGCACCCC
AATACCCAAGTAGAGGCCTCTACCTCGACATCGACGAAACCAACATGACC
GTTCAAGTGCGCCACGAGTACTGGAACGCATCTCCTATAAAAAGCCAATC
CCAGGGCTCCATCCAGGTCCTCGACAGCGGCAACGTCCTTGTCGGATACG
GCTTCAGCGCCGCATGGACGGAATTCAGCATGGACGGCGAAGTCCTCTGC
CACGCCCACTTCGCACCTGAGCGAGACTTCAGCAGAGGCAAAGTCATCTC
CTATCGCACTTTCAAACACTCCTGGGTCGGCACGCCTAACACCCTCCCGG
ACTTTGAGGTCTACGCCTACCGCGCAGCAGCCAGTTGGAACGGCGCCACC
GAAGTCACGCAATGGGTGCTAGAAGGCACCAACGAAAAGATCTCAGAAAC
AGCACAGCCCACCTTCCTCTCAGCAGTGCCTAAAGATGGCTTCGAGACAG
TCATCCCCATTCCGAACGACGCAAAGTTCAAATACTTGCGCGTTCGCGCC
GTCAATGCAAAGGGCGAGACTCTTGCCGCTAGCAAGTTAGCAAGATGGGA
TCCTACTTCCAACGAAGCAGTCGTAGTGAGTGGTGATAGCGACGAATCCT
TCTTTGTGGACCGTGAGACAGTCTATGCCATTCTCATATTCCTCACGATT
GCGTTGTTTTCCACGGCAGCGATTGGCGCGTTTTTATGGTTCGGCGTCAA
GAAGGGCTATCTTGTGTCTTGGGTACGGAGCCATCGATGGAATGATAAAG
AACGCGGGACCTTCCAGCCTTTGAATCTTTCGGGCGGAAGCGTGGATCTG
AGTGATGCAGAGGTAGAGGATAGTGTTGAATTTTCGGCATTGTTGGGGGA
TCATGTATTGGGCTCGGGGCCGGATGTGGAAAGGGCGGGGAGTATGGATG
TCGTTAGGAGGTGATGGAGGATTTTCTGGGTTTGTACATGCATGTATAGC
GAGTAGTCCATGTGTACAGCAATATATCTCATCTGTTTTGGATATATGTT
ATGTAGATACTAGCCTGACTTGGTTTACTTTTTGCTTTCTTACGAATCAC
TACAAAGATTG back to topCoding sequence (CDS) from alignment at ch4:3600938..3603998+ >KJC3_005749-T1 ID=KJC3_005749-T1|Name=KJC3_005749-T1|organism=Aspergillus niger KJC3|type=CDS|length=3252bp|location=Sequence derived from alignment at ch4:3600938..3603998+ (Aspergillus niger KJC3)
ATGATTCTAGACCAGAAGGGTCGCTTGGTCTGGACGAAGCCATACGGGCA
CACCTACAATTTCAATGTCTACAACTATAAGGGCCAGGATTATTTAACGT
TCTGGGTGGGCGACGACAGTAGGGTGGGACACGGCGAGGGCACATACTAC
ATGCTAGACTCGTCGTACCAGGAAGCATTCACCCTCAGTGGTGCGAATGG
ACTCGCAGCAGATCTTCACGAGTTCCACATAACCCTCGACGAGACCGCAG
TTTACACTATCTATGACATCCGCCCGGCAGATATCCGGGTCGCTGGCGGT
CCTGAGAATGGCTGGATATGGGATGGCACGTTCCAAGAAGTTAACATTGA
GACGAAAGAACTCCTCTTCGAATGGCGAGCCTCCGAACACTTCGACATCG
CCGACGTCTATAGAGGTCCCGAAGGCTCGGGGGACGATGAGAAACGCCCG
TGGGACTACTTTCATATCAACAGCATCGACAAAGACGCAAAAGGCAATTT
TCTTGTTTCAGCCCGCTACTGCAACTGCCTGATCTATATCGACGGTCGCA
CAGGTGAGACTATCTGGACTCTAGGCGGCAAGCGAAGCAATTTCACCGAT
CTTTCAGGCGGCGCAGCTACTAATTTCACCTGGCAACACCACGCACGCTT
CCGCGACAACGGCACGGCAATCACCCTCCTTGACAATTCATCTCGCGGCA
GGGGCGCACCCCAATACCCAAGTAGAGGCCTCTACCTCGACATCGACGAA
ACCAACATGACCGTTCAAGTGCGCCACGAGTACTGGAACGCATCTCCTAT
AAAAAGCCAATCCCAGGGCTCCATCCAGGTCCTCGACAGCGGCAACGTCC
TTGTCGGATACGGCTTCAGCGCCGCATGGACGGAATTCAGCATGGACGGC
GAAGTCCTCTGCCACGCCCACTTCGCACCTGAGCGAGACTTCAGCAGAGG
CAAAGTCATCTCCTATCGCACTTTCAAACACTCCTGGGTCGGCACGCCTA
ACACCCTCCCGGACTTTGAGGTCTACGCCTACCGCGCAGCAGCCAGTTGG
AACGGCGCCACCGAAGTCACGCAATGGGTGCTAGAAGGCACCAACGAAAA
GATCTCAGAAACAGCACAGCCCACCTTCCTCTCAGCAGTGCCTAAAGATG
GCTTCGAGACAGTCATCCCCATTCCGAACGACGCAAAGTTCAAATACTTG
CGCGTTCGCGCCGTCAATGCAAAGGGCGAGACTCTTGCCGCTAGCAAGTT
AGCAAGATGGGATCCTACTTCCAACGAAGCAGTCGTAGTGAGTGGTGATA
GCGACGAATCCTTCTTTGTGGACCGTGAGACAGTCTATGCCATTCTCATA
TTCCTCACGATTGCGTTGTTTTCCACGGCAGCGATTGGCGCGTTTTTATG
GTTCGGCGTCAAGAAGGGCTATCTTGTGTCTTGGGTACGGAGCCATCGAT
GGAATGATAAAGAACGCGGGACCTTCCAGCCTTTGAATCTTTCGGGCGGA
AGCGTGGATCTGAGTGATGCAGAGGTAGAGGATAGTGTTGAATTTTCGGC
ATTGTTGGGGGATCATGTATTGGGCTCGGGGCCGGATGTGGAAAGGGCGG
GGAGTATGGATGTCGTTAGGAGGTGAATGATTCTAGACCAGAAGGGTCGC
TTGGTCTGGACGAAGCCATACGGGCACACCTACAATTTCAATGTCTACAA
CTATAAGGGCCAGGATTATTTAACGTTCTGGGTGGGCGACGACAGTAGGG
TGGGACACGGCGAGGGCACATACTACATGCTAGACTCGTCGTACCAGGAA
GCATTCACCCTCAGTGGTGCGAATGGACTCGCAGCAGATCTTCACGAGTT
CCACATAACCCTCGACGAGACCGCAGTTTACACTATCTATGACATCCGCC
CGGCAGATATCCGGGTCGCTGGCGGTCCTGAGAATGGCTGGATATGGGAT
GGCACGTTCCAAGAAGTTAACATTGAGACGAAAGAACTCCTCTTCGAATG
GCGAGCCTCCGAACACTTCGACATCGCCGACGTCTATAGAGGTCCCGAAG
GCTCGGGGGACGATGAGAAACGCCCGTGGGACTACTTTCATATCAACAGC
ATCGACAAAGACGCAAAAGGCAATTTTCTTGTTTCAGCCCGCTACTGCAA
CTGCCTGATCTATATCGACGGTCGCACAGGTGAGACTATCTGGACTCTAG
GCGGCAAGCGAAGCAATTTCACCGATCTTTCAGGCGGCGCAGCTACTAAT
TTCACCTGGCAACACCACGCACGCTTCCGCGACAACGGCACGGCAATCAC
CCTCCTTGACAATTCATCTCGCGGCAGGGGCGCACCCCAATACCCAAGTA
GAGGCCTCTACCTCGACATCGACGAAACCAACATGACCGTTCAAGTGCGC
CACGAGTACTGGAACGCATCTCCTATAAAAAGCCAATCCCAGGGCTCCAT
CCAGGTCCTCGACAGCGGCAACGTCCTTGTCGGATACGGCTTCAGCGCCG
CATGGACGGAATTCAGCATGGACGGCGAAGTCCTCTGCCACGCCCACTTC
GCACCTGAGCGAGACTTCAGCAGAGGCAAAGTCATCTCCTATCGCACTTT
CAAACACTCCTGGGTCGGCACGCCTAACACCCTCCCGGACTTTGAGGTCT
ACGCCTACCGCGCAGCAGCCAGTTGGAACGGCGCCACCGAAGTCACGCAA
TGGGTGCTAGAAGGCACCAACGAAAAGATCTCAGAAACAGCACAGCCCAC
CTTCCTCTCAGCAGTGCCTAAAGATGGCTTCGAGACAGTCATCCCCATTC
CGAACGACGCAAAGTTCAAATACTTGCGCGTTCGCGCCGTCAATGCAAAG
GGCGAGACTCTTGCCGCTAGCAAGTTAGCAAGATGGGATCCTACTTCCAA
CGAAGCAGTCGTAGTGAGTGGTGATAGCGACGAATCCTTCTTTGTGGACC
GTGAGACAGTCTATGCCATTCTCATATTCCTCACGATTGCGTTGTTTTCC
ACGGCAGCGATTGGCGCGTTTTTATGGTTCGGCGTCAAGAAGGGCTATCT
TGTGTCTTGGGTACGGAGCCATCGATGGAATGATAAAGAACGCGGGACCT
TCCAGCCTTTGAATCTTTCGGGCGGAAGCGTGGATCTGAGTGATGCAGAG
GTAGAGGATAGTGTTGAATTTTCGGCATTGTTGGGGGATCATGTATTGGG
CTCGGGGCCGGATGTGGAAAGGGCGGGGAGTATGGATGTCGTTAGGAGGT
GA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005749-T1.utr3p1 | KJC3_005749-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-21) |
| DBxref | InterPro:IPR039535 |
| DBxref | PFAM:PF14269 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3600938..3603998 + |
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