You are here

Home

KJC3_005826-T1, KJC3_005826-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005826-T1
Unique NameKJC3_005826-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3864641..3865858+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005826-T1 ID=KJC3_005826-T1|Name=KJC3_005826-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1218bp|location=Sequence derived from alignment at ch4:3864641..3865858+ (Aspergillus niger KJC3)
ATGTCGGCCGAAAGAAGCGCAGATATCAACGGCAAGGCGCCAGTTCAGCA
ACCTACTAACTCTGCCCGCGCGACACAAGGTGCAGGCTTGGTTAATGTGC
AACCAGCGCGCTTGGACGACCTGCAACCGAAGTATGCGCAGCAAATTCAA
CACGGTGAAGATAACCCCGATGCGCACGGATGGTACGCTTCGTTCAGTAA
GTTTCACCCTTGACCTATATCACACCATCCAAGCTTTATTGGTCTAACGG
ACTCGTGATGCTATTAGTTCACGGACTTGGTGAATGTATTGGTTGCTTGG
GTGCCATTCCATGCTGTTTCTGCTGCCCCAACCCTTTCAAACCAGTCGCG
CAGGGTGAAGTCGGCTTAATCACAAGATTTGGAAGGTTCGCAAGCCCCAC
GACGATAACTCTAGAATATATGTTCTAATTGATTTTCTTCCCAGATTCGA
ACGCTCCGTCGATCCCGGTCTGGTCAAAGTGAACCCGTTGAGCGAGCATC
TCACAGCGGTGGATGTTAAGATCCAGATCGTTGAAGTGCCCCGCCAGAGC
TGCATGACCAAGGACAATGTCAACCTAAACCTCAGTTCCGTGATTTATTA
CCAGATCGTTTCTCCCCACAAAGCCGCATTTGGTATTTCCAATATCCGCC
AGGCGCTTGTGGAGCGTACTCAGACTACATTGCGTCATGTTATCGGCGCA
AGAGTTTTGCAGGACGTTATTGAACGCCGTGAAGAGATCGCTCAGTCGAC
TTCAGAAATAATCGAGGACGTTGCTGGTGGATGGGGTGTCCAGGTAGAGT
CCATGCTCATCAAGGACATCATATTTAGCAATGATCTGCAGGACTCTCTT
TCTATGGCTGCGCAGTCTAAGCGTATCGGTGAAAGTAAGGTCATAGCAGC
TCGTGCTGAAGTCGAGTCGGCCAAGTTGATGCGTCAGGTACATATCCCAT
CTTATGAATCTAGTCGACATGAGCTAATCAATTTTAGGCCGCTGACATCT
TGTCTTCTGCCCCTGCTATGCAAATCCGCTATCTCGAGGCGATGCAATCC
ATGGCCAAGACAGCCAACAGCAAAGTCATCTTTTTGCCAGCAATGAACCA
GACCGTGCAGCAGCAAATGGCTGCGGCAGAAAATGCTGGCGAAGGCCCTA
GTCGATACCAACAGCCTGATGATGGATTCCAACGTGCAATGAATGCGCGC
GTCGTCGAAGACATATAG
back to top

Coding sequence (CDS) from alignment at ch4:3864641..3865858+

>KJC3_005826-T1 ID=KJC3_005826-T1|Name=KJC3_005826-T1|organism=Aspergillus niger KJC3|type=CDS|length=4152bp|location=Sequence derived from alignment at ch4:3864641..3865858+ (Aspergillus niger KJC3)
ATGTCGGCCGAAAGAAGCGCAGATATCAACGGCAAGGCGCCAGTTCAGCA
ACCTACTAACTCTGCCCGCGCGACACAAGGTGCAGGCTTGGTTAATGTGC
AACCAGCGCGCTTGGACGACCTGCAACCGAAGTATGCGCAGCAAATTCAA
CACGGTGAAGATAACCCCGATGCGCACGGATGGTACGCTTCGTTCATTCA
CGGACTTGGTGAATGTATTGGTTGCTTGGGTGCCATTCCATGCTGTTTCT
GCTGCCCCAACCCTTTCAAACCAGTCGCGCAGGGTGAAGTCGGCTTAATC
ACAAGATTTGGAAGATTCGAACGCTCCGTCGATCCCGGTCTGGTCAAAGT
GAACCCGTTGAGCGAGCATCTCACAGCGGTGGATGTTAAGATCCAGATCG
TTGAAGTGCCCCGCCAGAGCTGCATGACCAAGGACAATGTCAACCTAAAC
CTCAGTTCCGTGATTTATTACCAGATCGTTTCTCCCCACAAAGCCGCATT
TGGTATTTCCAATATCCGCCAGGCGCTTGTGGAGCGTACTCAGACTACAT
TGCGTCATGTTATCGGCGCAAGAGTTTTGCAGGACGTTATTGAACGCCGT
GAAGAGATCGCTCAGTCGACTTCAGAAATAATCGAGGACGTTGCTGGTGG
ATGGGGTGTCCAGGTAGAGTCCATGCTCATCAAGGACATCATATTTAGCA
ATGATCTGCAGGACTCTCTTTCTATGGCTGCGCAGTCTAAGCGTATCGGT
GAAAGTAAGGTCATAGCAGCTCGTGCTGAAGTCGAGTCGGCCAAGTTGAT
GCGTCAGGCCGCTGACATCTTGTCTTCTGCCCCTGCTATGCAAATCCGCT
ATCTCGAGGCGATGCAATCCATGGCCAAGACAGCCAACAGCAAAGTCATC
TTTTTGCCAGCAATGAACCAGACCGTGCAGCAGCAAATGGCTGCGGCAGA
AAATGCTGGCGAAGGCCCTAGTCGATACCAACAGCCTGATGATGGATTCC
AACGTGCAATGAATGCGCGCGTCGTCGAAGACATATAGATGTCGGCCGAA
AGAAGCGCAGATATCAACGGCAAGGCGCCAGTTCAGCAACCTACTAACTC
TGCCCGCGCGACACAAGGTGCAGGCTTGGTTAATGTGCAACCAGCGCGCT
TGGACGACCTGCAACCGAAGTATGCGCAGCAAATTCAACACGGTGAAGAT
AACCCCGATGCGCACGGATGGTACGCTTCGTTCATTCACGGACTTGGTGA
ATGTATTGGTTGCTTGGGTGCCATTCCATGCTGTTTCTGCTGCCCCAACC
CTTTCAAACCAGTCGCGCAGGGTGAAGTCGGCTTAATCACAAGATTTGGA
AGATTCGAACGCTCCGTCGATCCCGGTCTGGTCAAAGTGAACCCGTTGAG
CGAGCATCTCACAGCGGTGGATGTTAAGATCCAGATCGTTGAAGTGCCCC
GCCAGAGCTGCATGACCAAGGACAATGTCAACCTAAACCTCAGTTCCGTG
ATTTATTACCAGATCGTTTCTCCCCACAAAGCCGCATTTGGTATTTCCAA
TATCCGCCAGGCGCTTGTGGAGCGTACTCAGACTACATTGCGTCATGTTA
TCGGCGCAAGAGTTTTGCAGGACGTTATTGAACGCCGTGAAGAGATCGCT
CAGTCGACTTCAGAAATAATCGAGGACGTTGCTGGTGGATGGGGTGTCCA
GGTAGAGTCCATGCTCATCAAGGACATCATATTTAGCAATGATCTGCAGG
ACTCTCTTTCTATGGCTGCGCAGTCTAAGCGTATCGGTGAAAGTAAGGTC
ATAGCAGCTCGTGCTGAAGTCGAGTCGGCCAAGTTGATGCGTCAGGCCGC
TGACATCTTGTCTTCTGCCCCTGCTATGCAAATCCGCTATCTCGAGGCGA
TGCAATCCATGGCCAAGACAGCCAACAGCAAAGTCATCTTTTTGCCAGCA
ATGAACCAGACCGTGCAGCAGCAAATGGCTGCGGCAGAAAATGCTGGCGA
AGGCCCTAGTCGATACCAACAGCCTGATGATGGATTCCAACGTGCAATGA
ATGCGCGCGTCGTCGAAGACATATAGATGTCGGCCGAAAGAAGCGCAGAT
ATCAACGGCAAGGCGCCAGTTCAGCAACCTACTAACTCTGCCCGCGCGAC
ACAAGGTGCAGGCTTGGTTAATGTGCAACCAGCGCGCTTGGACGACCTGC
AACCGAAGTATGCGCAGCAAATTCAACACGGTGAAGATAACCCCGATGCG
CACGGATGGTACGCTTCGTTCATTCACGGACTTGGTGAATGTATTGGTTG
CTTGGGTGCCATTCCATGCTGTTTCTGCTGCCCCAACCCTTTCAAACCAG
TCGCGCAGGGTGAAGTCGGCTTAATCACAAGATTTGGAAGATTCGAACGC
TCCGTCGATCCCGGTCTGGTCAAAGTGAACCCGTTGAGCGAGCATCTCAC
AGCGGTGGATGTTAAGATCCAGATCGTTGAAGTGCCCCGCCAGAGCTGCA
TGACCAAGGACAATGTCAACCTAAACCTCAGTTCCGTGATTTATTACCAG
ATCGTTTCTCCCCACAAAGCCGCATTTGGTATTTCCAATATCCGCCAGGC
GCTTGTGGAGCGTACTCAGACTACATTGCGTCATGTTATCGGCGCAAGAG
TTTTGCAGGACGTTATTGAACGCCGTGAAGAGATCGCTCAGTCGACTTCA
GAAATAATCGAGGACGTTGCTGGTGGATGGGGTGTCCAGGTAGAGTCCAT
GCTCATCAAGGACATCATATTTAGCAATGATCTGCAGGACTCTCTTTCTA
TGGCTGCGCAGTCTAAGCGTATCGGTGAAAGTAAGGTCATAGCAGCTCGT
GCTGAAGTCGAGTCGGCCAAGTTGATGCGTCAGGCCGCTGACATCTTGTC
TTCTGCCCCTGCTATGCAAATCCGCTATCTCGAGGCGATGCAATCCATGG
CCAAGACAGCCAACAGCAAAGTCATCTTTTTGCCAGCAATGAACCAGACC
GTGCAGCAGCAAATGGCTGCGGCAGAAAATGCTGGCGAAGGCCCTAGTCG
ATACCAACAGCCTGATGATGGATTCCAACGTGCAATGAATGCGCGCGTCG
TCGAAGACATATAGATGTCGGCCGAAAGAAGCGCAGATATCAACGGCAAG
GCGCCAGTTCAGCAACCTACTAACTCTGCCCGCGCGACACAAGGTGCAGG
CTTGGTTAATGTGCAACCAGCGCGCTTGGACGACCTGCAACCGAAGTATG
CGCAGCAAATTCAACACGGTGAAGATAACCCCGATGCGCACGGATGGTAC
GCTTCGTTCATTCACGGACTTGGTGAATGTATTGGTTGCTTGGGTGCCAT
TCCATGCTGTTTCTGCTGCCCCAACCCTTTCAAACCAGTCGCGCAGGGTG
AAGTCGGCTTAATCACAAGATTTGGAAGATTCGAACGCTCCGTCGATCCC
GGTCTGGTCAAAGTGAACCCGTTGAGCGAGCATCTCACAGCGGTGGATGT
TAAGATCCAGATCGTTGAAGTGCCCCGCCAGAGCTGCATGACCAAGGACA
ATGTCAACCTAAACCTCAGTTCCGTGATTTATTACCAGATCGTTTCTCCC
CACAAAGCCGCATTTGGTATTTCCAATATCCGCCAGGCGCTTGTGGAGCG
TACTCAGACTACATTGCGTCATGTTATCGGCGCAAGAGTTTTGCAGGACG
TTATTGAACGCCGTGAAGAGATCGCTCAGTCGACTTCAGAAATAATCGAG
GACGTTGCTGGTGGATGGGGTGTCCAGGTAGAGTCCATGCTCATCAAGGA
CATCATATTTAGCAATGATCTGCAGGACTCTCTTTCTATGGCTGCGCAGT
CTAAGCGTATCGGTGAAAGTAAGGTCATAGCAGCTCGTGCTGAAGTCGAG
TCGGCCAAGTTGATGCGTCAGGCCGCTGACATCTTGTCTTCTGCCCCTGC
TATGCAAATCCGCTATCTCGAGGCGATGCAATCCATGGCCAAGACAGCCA
ACAGCAAAGTCATCTTTTTGCCAGCAATGAACCAGACCGTGCAGCAGCAA
ATGGCTGCGGCAGAAAATGCTGGCGAAGGCCCTAGTCGATACCAACAGCC
TGATGATGGATTCCAACGTGCAATGAATGCGCGCGTCGTCGAAGACATAT
AG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005826KJC3_005826Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005826-T1.exon1KJC3_005826-T1.exon1Aspergillus niger KJC3exon
KJC3_005826-T1.exon2KJC3_005826-T1.exon2Aspergillus niger KJC3exon
KJC3_005826-T1.exon3KJC3_005826-T1.exon3Aspergillus niger KJC3exon
KJC3_005826-T1.exon4KJC3_005826-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005826-T1.cdsKJC3_005826-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005826-T1KJC3_005826-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteMEROPS:MER0192051
DBxrefInterPro:IPR036013
DBxrefInterPro:IPR001107
DBxrefInterPro:IPR001972
DBxrefPFAM:PF01145
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3864641..3865858 +
Powered by Drupal