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KJC3_005873-T1, KJC3_005873-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005873-T1
Unique NameKJC3_005873-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3989670..3991098-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005873-T1 ID=KJC3_005873-T1|Name=KJC3_005873-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1429bp|location=Sequence derived from alignment at ch4:3989670..3991098- (Aspergillus niger KJC3)
GTGTGCTATCACAACTATCTAGTTTTCCTATCAGAACTTGCTTTTGAGTC
CCAGTGTCACATATTCAGGACGGTACACGATGATGCTTGACAAAAGATCC
CCATATCGTATGGAACCCCTTCCCGCCAAGCCTTCACATTCTATAGTATA
CACTAACGCCAAGAAGAGGAGGGAAGCCTCTGGTACTATGCGCCCAGCCA
AGGTGCACCCATTTCTTTTGCAATAATGTTCGCTGTCTCTGGAATGGTAC
ACATCTACCAGTGTTGGTATGTATTCTCACACAAGTGCTATGCACCATGC
AGTTCCTAACGATGATAACAGCCAATACAAGTCATGGAAAGTGACTGGAC
TCCTGCCCTGGTCTGCTCTTCTCTTCACAGCTGGGTTCATAACGCGTACT
ATCGGCGCCTTTGGACAGTGGGGGAATGTGGGCATCTACATTGCAAGCAC
CGTTCTCTTGCTGGCTGCACCGTGAGTGCTTGTTGATGCGAATTGACCAT
GAATGTCACTGACTAGCGTGCAGACCCGTCTATGAGGGCGCCAACTACTT
CACTCTGGGCCGCATCCTTTACTACATCCCATATCATTCGCCAATTCATC
CTGGGCGCGTTTTCACCACTTTTGTGGCGGTTGGTGTGGTGATTGAAGCT
ATCACCGGCAATGGGGCTGCGCTAGTTGCCAATTCCGAGGCGACTGAAGG
TAAAAGGAAGACGGGAGAGGGATTGCTCAAAGCAGCTTTGATCTTGCAAC
TTGTGTTGATGGCAGCATTTGTGGCCTTGGCTGCCAGATTCCACTACAAC
TGTTCTCGTGGCGGCGTCTTGAACCACAAGATCAAGCGGGCCTTGTACGT
GCTGTATTGCAGTTGTACCCTCATCACTGTGCGCACGATCTATCGAACAG
TGGAATATTTTAGCGCTGCGAGCCTCAATGTCTATAGTGGCAACCAGATC
AGCCCGATCCTCAAGGATGAGTGGTTTTTCTGGGTTTTTGAGGCTGGTGT
CATGTACCTCAACACCATCTTGCTGAATGTCTGCCATCCGATGCAATGGC
TTCCACGCTCCAACAAGATATATCTCGCCACGGATGGCGTTACCGAAATC
GAAGGGCCTGGTTACGACGATCACCGACCAGTCATCCTGACCCTTATTGA
TCCCTTCGACATAGTTGGCCTGATCAAGAACAAAGGTAGACAAGAGAAGT
ATTGGGAAGCCGGGCCAGTCGGCAAACTTAACAAGGATACGCCTGGATCG
TTTGCCGTGTAGCTGAGAGCGGGTTGGAATATATGTACTTAGTTATCCTT
GAGCCAGGTCTGAGTGCGACGGCGTTTCGGTTATATAGTATAGAATATTT
GTCGTGATTATGATGTTTATAGAATATTCCTTATTGAGCTCTGTTGAAGT
ATCACATTTCCATCTGAATGATCCGTAAC
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Coding sequence (CDS) from alignment at ch4:3989670..3991098-

>KJC3_005873-T1 ID=KJC3_005873-T1|Name=KJC3_005873-T1|organism=Aspergillus niger KJC3|type=CDS|length=4068bp|location=Sequence derived from alignment at ch4:3989670..3991098- (Aspergillus niger KJC3)
ACCCGTCTATGAGGGCGCCAACTACTTCACTCTGGGCCGCATCCTTTACT
ACATCCCATATCATTCGCCAATTCATCCTGGGCGCGTTTTCACCACTTTT
GTGGCGGTTGGTGTGGTGATTGAAGCTATCACCGGCAATGGGGCTGCGCT
AGTTGCCAATTCCGAGGCGACTGAAGGTAAAAGGAAGACGGGAGAGGGAT
TGCTCAAAGCAGCTTTGATCTTGCAACTTGTGTTGATGGCAGCATTTGTG
GCCTTGGCTGCCAGATTCCACTACAACTGTTCTCGTGGCGGCGTCTTGAA
CCACAAGATCAAGCGGGCCTTGTACGTGCTGTATTGCAGTTGTACCCTCA
TCACTGTGCGCACGATCTATCGAACAGTGGAATATTTTAGCGCTGCGAGC
CTCAATGTCTATAGTGGCAACCAGATCAGCCCGATCCTCAAGGATGAGTG
GTTTTTCTGGGTTTTTGAGGCTGGTGTCATGTACCTCAACACCATCTTGC
TGAATGTCTGCCATCCGATGCAATGGCTTCCACGCTCCAACAAGATATAT
CTCGCCACGGATGGCGTTACCGAAATCGAAGGGCCTGGTTACGACGATCA
CCGACCAGTCATCCTGACCCTTATTGATCCCTTCGACATAGTTGGCCTGA
TCAAGAACAAAGGTAGACAAGAGAAGTATTGGGAAGCCGGGCCAGTCGGC
AAACTTAACAAGGATACGCCTGGATCGTTTGCCGTGTAGCCAATACAAGT
CATGGAAAGTGACTGGACTCCTGCCCTGGTCTGCTCTTCTCTTCACAGCT
GGGTTCATAACGCGTACTATCGGCGCCTTTGGACAGTGGGGGAATGTGGG
CATCTACATTGCAAGCACCGTTCTCTTGCTGGCTGCACCAGGAGGGAAGC
CTCTGGTACTATGCGCCCAGCCAAGGTGCACCCATTTCTTTTGCAATAAT
GTTCGCTGTCTCTGGAATGGTACACATCTACCAGTGTTGATGATGCTTGA
CAAAAGATCCCCATATCACCCGTCTATGAGGGCGCCAACTACTTCACTCT
GGGCCGCATCCTTTACTACATCCCATATCATTCGCCAATTCATCCTGGGC
GCGTTTTCACCACTTTTGTGGCGGTTGGTGTGGTGATTGAAGCTATCACC
GGCAATGGGGCTGCGCTAGTTGCCAATTCCGAGGCGACTGAAGGTAAAAG
GAAGACGGGAGAGGGATTGCTCAAAGCAGCTTTGATCTTGCAACTTGTGT
TGATGGCAGCATTTGTGGCCTTGGCTGCCAGATTCCACTACAACTGTTCT
CGTGGCGGCGTCTTGAACCACAAGATCAAGCGGGCCTTGTACGTGCTGTA
TTGCAGTTGTACCCTCATCACTGTGCGCACGATCTATCGAACAGTGGAAT
ATTTTAGCGCTGCGAGCCTCAATGTCTATAGTGGCAACCAGATCAGCCCG
ATCCTCAAGGATGAGTGGTTTTTCTGGGTTTTTGAGGCTGGTGTCATGTA
CCTCAACACCATCTTGCTGAATGTCTGCCATCCGATGCAATGGCTTCCAC
GCTCCAACAAGATATATCTCGCCACGGATGGCGTTACCGAAATCGAAGGG
CCTGGTTACGACGATCACCGACCAGTCATCCTGACCCTTATTGATCCCTT
CGACATAGTTGGCCTGATCAAGAACAAAGGTAGACAAGAGAAGTATTGGG
AAGCCGGGCCAGTCGGCAAACTTAACAAGGATACGCCTGGATCGTTTGCC
GTGTAGCCAATACAAGTCATGGAAAGTGACTGGACTCCTGCCCTGGTCTG
CTCTTCTCTTCACAGCTGGGTTCATAACGCGTACTATCGGCGCCTTTGGA
CAGTGGGGGAATGTGGGCATCTACATTGCAAGCACCGTTCTCTTGCTGGC
TGCACCAGGAGGGAAGCCTCTGGTACTATGCGCCCAGCCAAGGTGCACCC
ATTTCTTTTGCAATAATGTTCGCTGTCTCTGGAATGGTACACATCTACCA
GTGTTGATGATGCTTGACAAAAGATCCCCATATCACCCGTCTATGAGGGC
GCCAACTACTTCACTCTGGGCCGCATCCTTTACTACATCCCATATCATTC
GCCAATTCATCCTGGGCGCGTTTTCACCACTTTTGTGGCGGTTGGTGTGG
TGATTGAAGCTATCACCGGCAATGGGGCTGCGCTAGTTGCCAATTCCGAG
GCGACTGAAGGTAAAAGGAAGACGGGAGAGGGATTGCTCAAAGCAGCTTT
GATCTTGCAACTTGTGTTGATGGCAGCATTTGTGGCCTTGGCTGCCAGAT
TCCACTACAACTGTTCTCGTGGCGGCGTCTTGAACCACAAGATCAAGCGG
GCCTTGTACGTGCTGTATTGCAGTTGTACCCTCATCACTGTGCGCACGAT
CTATCGAACAGTGGAATATTTTAGCGCTGCGAGCCTCAATGTCTATAGTG
GCAACCAGATCAGCCCGATCCTCAAGGATGAGTGGTTTTTCTGGGTTTTT
GAGGCTGGTGTCATGTACCTCAACACCATCTTGCTGAATGTCTGCCATCC
GATGCAATGGCTTCCACGCTCCAACAAGATATATCTCGCCACGGATGGCG
TTACCGAAATCGAAGGGCCTGGTTACGACGATCACCGACCAGTCATCCTG
ACCCTTATTGATCCCTTCGACATAGTTGGCCTGATCAAGAACAAAGGTAG
ACAAGAGAAGTATTGGGAAGCCGGGCCAGTCGGCAAACTTAACAAGGATA
CGCCTGGATCGTTTGCCGTGTAGCCAATACAAGTCATGGAAAGTGACTGG
ACTCCTGCCCTGGTCTGCTCTTCTCTTCACAGCTGGGTTCATAACGCGTA
CTATCGGCGCCTTTGGACAGTGGGGGAATGTGGGCATCTACATTGCAAGC
ACCGTTCTCTTGCTGGCTGCACCAGGAGGGAAGCCTCTGGTACTATGCGC
CCAGCCAAGGTGCACCCATTTCTTTTGCAATAATGTTCGCTGTCTCTGGA
ATGGTACACATCTACCAGTGTTGATGATGCTTGACAAAAGATCCCCATAT
CACCCGTCTATGAGGGCGCCAACTACTTCACTCTGGGCCGCATCCTTTAC
TACATCCCATATCATTCGCCAATTCATCCTGGGCGCGTTTTCACCACTTT
TGTGGCGGTTGGTGTGGTGATTGAAGCTATCACCGGCAATGGGGCTGCGC
TAGTTGCCAATTCCGAGGCGACTGAAGGTAAAAGGAAGACGGGAGAGGGA
TTGCTCAAAGCAGCTTTGATCTTGCAACTTGTGTTGATGGCAGCATTTGT
GGCCTTGGCTGCCAGATTCCACTACAACTGTTCTCGTGGCGGCGTCTTGA
ACCACAAGATCAAGCGGGCCTTGTACGTGCTGTATTGCAGTTGTACCCTC
ATCACTGTGCGCACGATCTATCGAACAGTGGAATATTTTAGCGCTGCGAG
CCTCAATGTCTATAGTGGCAACCAGATCAGCCCGATCCTCAAGGATGAGT
GGTTTTTCTGGGTTTTTGAGGCTGGTGTCATGTACCTCAACACCATCTTG
CTGAATGTCTGCCATCCGATGCAATGGCTTCCACGCTCCAACAAGATATA
TCTCGCCACGGATGGCGTTACCGAAATCGAAGGGCCTGGTTACGACGATC
ACCGACCAGTCATCCTGACCCTTATTGATCCCTTCGACATAGTTGGCCTG
ATCAAGAACAAAGGTAGACAAGAGAAGTATTGGGAAGCCGGGCCAGTCGG
CAAACTTAACAAGGATACGCCTGGATCGTTTGCCGTGTAGCCAATACAAG
TCATGGAAAGTGACTGGACTCCTGCCCTGGTCTGCTCTTCTCTTCACAGC
TGGGTTCATAACGCGTACTATCGGCGCCTTTGGACAGTGGGGGAATGTGG
GCATCTACATTGCAAGCACCGTTCTCTTGCTGGCTGCACCAGGAGGGAAG
CCTCTGGTACTATGCGCCCAGCCAAGGTGCACCCATTTCTTTTGCAATAA
TGTTCGCTGTCTCTGGAATGGTACACATCTACCAGTGTTGATGATGCTTG
ACAAAAGATCCCCATATC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005873KJC3_005873Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005873-T1KJC3_005873-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005873-T1.cdsKJC3_005873-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005873-T1.utr3p1KJC3_005873-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005873-T1.exon4KJC3_005873-T1.exon4Aspergillus niger KJC3exon
KJC3_005873-T1.exon3KJC3_005873-T1.exon3Aspergillus niger KJC3exon
KJC3_005873-T1.exon2KJC3_005873-T1.exon2Aspergillus niger KJC3exon
KJC3_005873-T1.exon1KJC3_005873-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005873-T1.utr5p1KJC3_005873-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007568
DBxrefPFAM:PF04479
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3989670..3991098 -
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