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KJC3_005933-T1, KJC3_005933-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005933-T1
Unique NameKJC3_005933-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4193334..4193735+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005933-T1 ID=KJC3_005933-T1|Name=KJC3_005933-T1|organism=Aspergillus niger KJC3|type=mRNA|length=402bp|location=Sequence derived from alignment at ch4:4193334..4193735+ (Aspergillus niger KJC3)
ATGCCTTTCACTGCCTCGTAAGTCTTGCAACCCCTCGCGACGTCATCTTT
TGGCGATTTCCTATCCAGTCGCGCGCATACCTGGACCTTGACGAGCTGGA
GCTGTCTTGGGATAGCTTGCGATCCCAATAATCTGAATGACGAGAGCATA
GTGTCGTGGGTATGCTAACGCCGTTGGGACCATAGGGATATCTGCAAGAT
CATCTTTGCGATCATCTTGCCGCCACTGGGTGTTTTCCTGGAGCGAGGAT
GCGGTGCTGATTTCCTGATCAACATCTGTTTGACAATCCTGGGTTGGCTC
CCTGGTGTCATTCATGCCTTGTACGTGGCCCGCCAAGTGATGGATTTCCG
GAGATTCCGAGGCTAACTCGTTTCGTTCAGCTATATCATATTCAAATACT
AG
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Coding sequence (CDS) from alignment at ch4:4193334..4193735+

>KJC3_005933-T1 ID=KJC3_005933-T1|Name=KJC3_005933-T1|organism=Aspergillus niger KJC3|type=CDS|length=522bp|location=Sequence derived from alignment at ch4:4193334..4193735+ (Aspergillus niger KJC3)
ATGCCTTTCACTGCCTCGGATATCTGCAAGATCATCTTTGCGATCATCTT
GCCGCCACTGGGTGTTTTCCTGGAGCGAGGATGCGGTGCTGATTTCCTGA
TCAACATCTGTTTGACAATCCTGGGTTGGCTCCCTGGTGTCATTCATGCC
TTCTATATCATATTCAAATACTAGATGCCTTTCACTGCCTCGGATATCTG
CAAGATCATCTTTGCGATCATCTTGCCGCCACTGGGTGTTTTCCTGGAGC
GAGGATGCGGTGCTGATTTCCTGATCAACATCTGTTTGACAATCCTGGGT
TGGCTCCCTGGTGTCATTCATGCCTTCTATATCATATTCAAATACTAGAT
GCCTTTCACTGCCTCGGATATCTGCAAGATCATCTTTGCGATCATCTTGC
CGCCACTGGGTGTTTTCCTGGAGCGAGGATGCGGTGCTGATTTCCTGATC
AACATCTGTTTGACAATCCTGGGTTGGCTCCCTGGTGTCATTCATGCCTT
CTATATCATATTCAAATACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PMP3_2KJC3_005933Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005933-T1.exon1KJC3_005933-T1.exon1Aspergillus niger KJC3exon
KJC3_005933-T1.exon2KJC3_005933-T1.exon2Aspergillus niger KJC3exon
KJC3_005933-T1.exon3KJC3_005933-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005933-T1.cdsKJC3_005933-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005933-T1KJC3_005933-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_4.10
NoteantiSMASH:Cluster_4.9
DBxrefInterPro:IPR000612
DBxrefPFAM:PF01679
Productplasma membrane proteolipid Pmp3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4193334..4193735 +
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