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KJC3_005947-T1, KJC3_005947-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005947-T1
Unique NameKJC3_005947-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4222400..4223790-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005947-T1 ID=KJC3_005947-T1|Name=KJC3_005947-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1391bp|location=Sequence derived from alignment at ch4:4222400..4223790- (Aspergillus niger KJC3)
CTTCTGCCTCGTGCTCCGACATGCCCCACTCTGGCACTCGGGCTTCGCAC
TGGCTCGGCTTGGTGACATATGAAGGTCGGCAACCGGATGTAAGTACTGT
TCACGAGGAAGGGGCTCGCATTAGAGGATTTATGGGGGGCGGTGGCCCCA
GTCTCTGTCAGGAAAAAGGACATGTGCTCTCTGCTGGTTTGAACCGAAGC
ATCAGTCCCATCACAACAACGCCGGCATCATGGATAACAGCCATTATGCA
CTGACGGAGGACCAGCTCCGGTTCTACCAGGAGAAGGGGTATTTGCTCAT
CCGAGGCTTTTTCAATGATCCTGAGACCAAGGTCCTGCAACAATGGACTC
AGGAAGTGCATGACCTTCCGCGAACCCCAGATGCAACTTACATGCCTTAT
GAGGTGAGATCATAGTGTCGCCTTTCTTTAGCAGACGGCTGGCGAGCTAA
TTTCCGCTGCAGGAAGTAAATGCGGAAGGCAAAAGAGTTCTCTGCCGCAC
TGAGAATTATGCCAATTCTCATGCTGGCTTCGACAGTTTTCTGCGTGGTG
AACGCATCTTGAGCGTTCTCCGTCAGCTAGCTACAGAGGAAATGATTCTT
TTCAAAGAGAAAATTAACTACAAACTCGCTGGTAGTGGTAAGAAATGTAA
ACCTACTGCACTTGACAGGGTACCAATTAATGCGACGCAGGTGGCTTCTC
CCCGCATATCGACGCTAATGCATATACTCACGTCAAGAAAATAAAGCACC
TGACAGTGCTTGCTGCTGTTGATGAGATGACTTCGGAAAATGGTGGGCTT
GACGTGGTTGACGGCAGTCATCTCATGGAGGTACCCCTTGGAGAAGATCG
CTGCATTGAACCTACGTGGGTCAAGAGCCAAACATGGACACCTTGCAATC
TGCAACCGGGTATGTCTGTTATATTATGACTGCTATATTCCAGGCATTAA
CCATCATCTTACACAGGTGACATTCTCGTTTTTGGCTCCTACCTTGCCCA
CAAAAGTGGCGCCAACACCAGCTCCAAGGACCGACGCGCAATTTATGCCA
CATACAACCGCTTGGCCGAGGGTGACCTGCACGATCAGTACTATGAGGAT
CGTCGCAAGCTGTGGCCTGCCACACACATGCGGAAAGAGGGGGAGTCGTA
TGAAGAGGGCAGGATGCGGTATGGCTATGGCTCCCCGATGCTTACGGTCG
AGGGTCAACAGCCGGTACTGGCGTAGCGTAAACTTAGGGTGTAAATCCGT
GGATGTATAGCCTGCTAAGGACAAGGGAAAGAAGATATTTGGAACGAGCA
ATTCGGCAGTCTAGTATTTTACAAATTCTGTTCTACATCGCGAAGCAGTC
AACCATGTAGATCAAACGATCAACACTTCATACTAAATGAC
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Coding sequence (CDS) from alignment at ch4:4222400..4223790-

>KJC3_005947-T1 ID=KJC3_005947-T1|Name=KJC3_005947-T1|organism=Aspergillus niger KJC3|type=CDS|length=3312bp|location=Sequence derived from alignment at ch4:4222400..4223790- (Aspergillus niger KJC3)
GTGACATTCTCGTTTTTGGCTCCTACCTTGCCCACAAAAGTGGCGCCAAC
ACCAGCTCCAAGGACCGACGCGCAATTTATGCCACATACAACCGCTTGGC
CGAGGGTGACCTGCACGATCAGTACTATGAGGATCGTCGCAAGCTGTGGC
CTGCCACACACATGCGGAAAGAGGGGGAGTCGTATGAAGAGGGCAGGATG
CGGTATGGCTATGGCTCCCCGATGCTTACGGTCGAGGGTCAACAGCCGGT
ACTGGCGTAGGTGGCTTCTCCCCGCATATCGACGCTAATGCATATACTCA
CGTCAAGAAAATAAAGCACCTGACAGTGCTTGCTGCTGTTGATGAGATGA
CTTCGGAAAATGGTGGGCTTGACGTGGTTGACGGCAGTCATCTCATGGAG
GTACCCCTTGGAGAAGATCGCTGCATTGAACCTACGTGGGTCAAGAGCCA
AACATGGACACCTTGCAATCTGCAACCGGGAAGTAAATGCGGAAGGCAAA
AGAGTTCTCTGCCGCACTGAGAATTATGCCAATTCTCATGCTGGCTTCGA
CAGTTTTCTGCGTGGTGAACGCATCTTGAGCGTTCTCCGTCAGCTAGCTA
CAGAGGAAATGATTCTTTTCAAAGAGAAAATTAACTACAAACTCGCTGGT
AGTGATGGATAACAGCCATTATGCACTGACGGAGGACCAGCTCCGGTTCT
ACCAGGAGAAGGGGTATTTGCTCATCCGAGGCTTTTTCAATGATCCTGAG
ACCAAGGTCCTGCAACAATGGACTCAGGAAGTGCATGACCTTCCGCGAAC
CCCAGATGCAACTTACATGCCTTATGAGGTGACATTCTCGTTTTTGGCTC
CTACCTTGCCCACAAAAGTGGCGCCAACACCAGCTCCAAGGACCGACGCG
CAATTTATGCCACATACAACCGCTTGGCCGAGGGTGACCTGCACGATCAG
TACTATGAGGATCGTCGCAAGCTGTGGCCTGCCACACACATGCGGAAAGA
GGGGGAGTCGTATGAAGAGGGCAGGATGCGGTATGGCTATGGCTCCCCGA
TGCTTACGGTCGAGGGTCAACAGCCGGTACTGGCGTAGGTGGCTTCTCCC
CGCATATCGACGCTAATGCATATACTCACGTCAAGAAAATAAAGCACCTG
ACAGTGCTTGCTGCTGTTGATGAGATGACTTCGGAAAATGGTGGGCTTGA
CGTGGTTGACGGCAGTCATCTCATGGAGGTACCCCTTGGAGAAGATCGCT
GCATTGAACCTACGTGGGTCAAGAGCCAAACATGGACACCTTGCAATCTG
CAACCGGGAAGTAAATGCGGAAGGCAAAAGAGTTCTCTGCCGCACTGAGA
ATTATGCCAATTCTCATGCTGGCTTCGACAGTTTTCTGCGTGGTGAACGC
ATCTTGAGCGTTCTCCGTCAGCTAGCTACAGAGGAAATGATTCTTTTCAA
AGAGAAAATTAACTACAAACTCGCTGGTAGTGATGGATAACAGCCATTAT
GCACTGACGGAGGACCAGCTCCGGTTCTACCAGGAGAAGGGGTATTTGCT
CATCCGAGGCTTTTTCAATGATCCTGAGACCAAGGTCCTGCAACAATGGA
CTCAGGAAGTGCATGACCTTCCGCGAACCCCAGATGCAACTTACATGCCT
TATGAGGTGACATTCTCGTTTTTGGCTCCTACCTTGCCCACAAAAGTGGC
GCCAACACCAGCTCCAAGGACCGACGCGCAATTTATGCCACATACAACCG
CTTGGCCGAGGGTGACCTGCACGATCAGTACTATGAGGATCGTCGCAAGC
TGTGGCCTGCCACACACATGCGGAAAGAGGGGGAGTCGTATGAAGAGGGC
AGGATGCGGTATGGCTATGGCTCCCCGATGCTTACGGTCGAGGGTCAACA
GCCGGTACTGGCGTAGGTGGCTTCTCCCCGCATATCGACGCTAATGCATA
TACTCACGTCAAGAAAATAAAGCACCTGACAGTGCTTGCTGCTGTTGATG
AGATGACTTCGGAAAATGGTGGGCTTGACGTGGTTGACGGCAGTCATCTC
ATGGAGGTACCCCTTGGAGAAGATCGCTGCATTGAACCTACGTGGGTCAA
GAGCCAAACATGGACACCTTGCAATCTGCAACCGGGAAGTAAATGCGGAA
GGCAAAAGAGTTCTCTGCCGCACTGAGAATTATGCCAATTCTCATGCTGG
CTTCGACAGTTTTCTGCGTGGTGAACGCATCTTGAGCGTTCTCCGTCAGC
TAGCTACAGAGGAAATGATTCTTTTCAAAGAGAAAATTAACTACAAACTC
GCTGGTAGTGATGGATAACAGCCATTATGCACTGACGGAGGACCAGCTCC
GGTTCTACCAGGAGAAGGGGTATTTGCTCATCCGAGGCTTTTTCAATGAT
CCTGAGACCAAGGTCCTGCAACAATGGACTCAGGAAGTGCATGACCTTCC
GCGAACCCCAGATGCAACTTACATGCCTTATGAGGTGACATTCTCGTTTT
TGGCTCCTACCTTGCCCACAAAAGTGGCGCCAACACCAGCTCCAAGGACC
GACGCGCAATTTATGCCACATACAACCGCTTGGCCGAGGGTGACCTGCAC
GATCAGTACTATGAGGATCGTCGCAAGCTGTGGCCTGCCACACACATGCG
GAAAGAGGGGGAGTCGTATGAAGAGGGCAGGATGCGGTATGGCTATGGCT
CCCCGATGCTTACGGTCGAGGGTCAACAGCCGGTACTGGCGTAGGTGGCT
TCTCCCCGCATATCGACGCTAATGCATATACTCACGTCAAGAAAATAAAG
CACCTGACAGTGCTTGCTGCTGTTGATGAGATGACTTCGGAAAATGGTGG
GCTTGACGTGGTTGACGGCAGTCATCTCATGGAGGTACCCCTTGGAGAAG
ATCGCTGCATTGAACCTACGTGGGTCAAGAGCCAAACATGGACACCTTGC
AATCTGCAACCGGGAAGTAAATGCGGAAGGCAAAAGAGTTCTCTGCCGCA
CTGAGAATTATGCCAATTCTCATGCTGGCTTCGACAGTTTTCTGCGTGGT
GAACGCATCTTGAGCGTTCTCCGTCAGCTAGCTACAGAGGAAATGATTCT
TTTCAAAGAGAAAATTAACTACAAACTCGCTGGTAGTGATGGATAACAGC
CATTATGCACTGACGGAGGACCAGCTCCGGTTCTACCAGGAGAAGGGGTA
TTTGCTCATCCGAGGCTTTTTCAATGATCCTGAGACCAAGGTCCTGCAAC
AATGGACTCAGGAAGTGCATGACCTTCCGCGAACCCCAGATGCAACTTAC
ATGCCTTATGAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005947KJC3_005947Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005947-T1KJC3_005947-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005947-T1.cdsKJC3_005947-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005947-T1.utr3p1KJC3_005947-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005947-T1.exon4KJC3_005947-T1.exon4Aspergillus niger KJC3exon
KJC3_005947-T1.exon3KJC3_005947-T1.exon3Aspergillus niger KJC3exon
KJC3_005947-T1.exon2KJC3_005947-T1.exon2Aspergillus niger KJC3exon
KJC3_005947-T1.exon1KJC3_005947-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005947-T1.utr5p1KJC3_005947-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR008775
DBxrefPFAM:PF05721
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4222400..4223790 -
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