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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4344292..4347668+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005993-T1 ID=KJC3_005993-T1|Name=KJC3_005993-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3377bp|location=Sequence derived from alignment at ch4:4344292..4347668+ (Aspergillus niger KJC3)
TTTACTACTAGTCCTGACTGACGGACTGACGGACTGCCTAACGACTAACT
AGTCTAGCTTGTCTCGACCCCGTCGCTCTTTCGCTCGCTTCCCTTCCCTC
TCCATTCTGTCTTTCTCTTCCCTTGACTTTGCTACTCTCTTCCCCCCTCC
TCCTCCTCTTCTCATCGCTTTCGATCACCGTCTTCTTTACCCTAACCTTT
CACCTTTTCCCCCTCTCATCCCTCCTCCTCCCCTCTTTGCCTTCTTCCCA
CCTTCTTTTCCCCTCCTCCCCTTTTCTGTTCTCCCCAAAGTCTCCCCGGA
GGTAGCAAGCAGGCAGCAGACGGGATCTCATCGACGGGAAATCCGCCCGC
CGACGCACTTCACTCATCTCAGCACCCGCCAACTTGTGAGCAGGCGGTAA
ATCCCGTTCGGAGAGAATTGATGCCGTAAAGGACCCAATCGAACCACGCC
AACATTTCTTGGGTGAACCAAGAAGACGAGGCAAGAGCGGTAGCAATCCC
GAGGCCGGAACCTTGGTCTAGACGTGGATCCTTGTCCCGGTTGGAGGGTC
AATTGTGGAAACGGCATACACATCCTTCCAGTAATCACCACCTCGTACCT
GACGGGCCCTGAGGGAAAGGGAAAGGGTGGTGATATTAATTTCTTCGACC
GACGTGCACGTTTCACTCAGTACGCTTGCTTGTGCGGCAATTATGGATTA
GGAATCGAGGAGCGCTTGAGATATAACCACCTGCGAAGCTCGGATTCGGA
TAGTTCGGTTTAAAGAAAAGAAAAGAAAAATAGTCGCTTTGTTTTCTTCC
TTTCCTGTCCTTTCGTTTTTGCAGGTATGTAATTTCACTTGCGATCCTGC
GGGTTGAATGCTGGATAGTAGAATGATGTTGCTCCGATACTAACGGGTGC
TTTGCCCTGGCGAACAGATCTCTGTTGATGTCTTTCGGTCTTTCTTACTC
TTCTAATCATTCGATATTTGTCGGCTGTATATCCCAGCTGACGTCCGCTC
ATTGGTATTCGCTACAATTCCGAGGCTTCTAATAGACGTGGAAGCTCTCA
TCCGCTCAACTTCACCGCAGTCGCTCTTTCGACAATTGATTTACTTATTC
GCCTTTGCTGCCTTTCTTTTACCGTCACTCAAAAGTTGACCGTCGTCTCT
TTCTTTACGCTCCTTGAGTTCGCTTTCACTACAGTCGCATTCGATCGACC
TAATCACCGCGCTCCTTTGCCGTCAGAATTTGTGTCGTGCAGGCAGACAC
CTTCCCTTCACTTCACATTCATTCGCTTTCATTTCGAGATAACTTCTCTC
ATATCATTCTTTCGATATTGCGAAGCTGCGGTCAGCAATCGCCGCACTTC
AGCACATACTCAGTAAATTTCGGCCCGACGTGGATGTTATCAGGATGGCC
CATCATGGCACAGGACATGCTCGCTTCAACAGAGTGATGCGCAAGAAATA
TCAATTGGATTCAGCATACTTTAGCGAGACTGGGAGGAGCCCGGGGAATC
ATGCGACTCCGACAATCATACCGCAGAATACGGTCGCAAATGGGCTGGAA
GGTGAACTAACCCTAGACCCAGTCATGCAGGCGCAGGATGTGCATGACAG
TCAGGGACTGTCCCTCGAAAAGCGCCAGCAATCAAACACAGCCACGGGGG
ATCAGGCTACGGTGTCTGCGACTATCGTCAACGTGGTCGACAACAATTCG
CAGACTAGCACCGGCACTTCGGCAACTGCACCGACAACGATATCTGAAGA
GTCGACCGTGCCCGCGACGTCGATCTCGTCAACAGAGACAGACTCATTGC
TCTTGTCGCTTTCTGCTACCGTCTCGATTGATCTATCTCTGACTGCTTCG
CCTGCGTATTCTTCTCCAACCGCAGATACCCCGGCAGTAACGAGTACGCC
TGAACCGTCCTCATCCACCCCACCATCATCTGCGCCCGCTACTTCGAAGA
CATCCACTCCGCTGTTTGGCTCTACTGCTACCGCTATTCCCTCTTCGGCT
CACCCCCAACCATCCAGCGCATTGTCCAGCTCTAGTCCAACTGGGACACA
AAGCGGTAGCCAAGTGACCGCCTCCGGCTCTGCTTGGGCATTCGGCTCCG
GTTCACAGTCCACGACGACATCCTCCGTGACCCAGACGAGCTCCGCGACG
ACATCCACCTTCTCATCGGACTCTACTTCCACCACTTCGCTCTACGGAGC
CTGGGGTACGGCCTCTAATGGAGGGGGTGGAGGATCAGGGGCAACTGCCA
CCGGACAAGGTGTCTCGCCTTCATCCTCTTCGGGCAGCTCTGGCTCTGGC
TCCGGCTCCGGCTCTGGCTCTGGCTCTGGCTCCCTCAGCAGCCAAACTAA
AGGCAAGATAGCTGGTGGTGTGGTTGGTGGTGTGGCTGCTGCTATGTTCG
TGTTCGTAATTGTTGTCTGGCTGCTTCGCCGACGCAAGAAGAACATCTTG
CCGCCATCTGGGGATGCCCTCCCCGAGCCGGACACGACCGGGACAGCCGA
AGGCTCTCTCCCGCGCTCCGCAGAGATGACATCGCGGCGGTCCAGCGACG
ACCCCCTGTTTACTGCGTCATACTTTGCCCCGGCTTTCATGAAGCGATGG
CGCCAGTCGCACATGACGACACGCACCGACAGTACTCTGAGCTCCGAGCC
CAGCGAACGCGGATTCCAAAAGATCTCTGGCCGGAAGATTCCTTCAGTGC
TGCAGTCAGGAGGAGACGGCTACGGCGGTGGATATGAACCGGGATCCCCT
ACTGCGTCTGAGCCGAGCACGCTTTTTTCTCCAAGCTCACCAGTTCAGCC
CCGGTCACCGCCAACACAACCGCCCGTAGCGACACCGTATGGCATGCCGT
TGGATACCAGCTATACTCGAGAAGCGGCGGAGGTAGGAGGTGTTGTGGTG
TTTCGACCATCGCCAGCCCGCACACCAGTTACTGGGTCCGCCAATGCCAG
TCTGTCCAATGAGCCAACCGGGCCGCGGGTCGTTTCGCAAGTCGGGGCGC
TCTCTCCGACAATGCCGAAGCGGCCTGATGCGCTCGGACGAAGCCATCCG
AGCTTCGATGGCAGTCGGGGCAGTCGGTTCACGGAGAGTATATGAAAGGT
TCCCCGGGGAGGTGAGAGTATATACTGGTGCTCTGTACATACGTGGAGGA
GTTATACATAGGGTTTCCGGGTGGTGTTCCCGGACTGGCGATGGTGATCA
TGTCTGGATTCTGTACTACTTGCTAGCCTGTTTCTTATGGATACCCCAAT
TCATTTCTTTGCATGTTTGTGTCGTTTGTGAGAGACTTGCGCTCATCTAC
TGATAATTACAATTGAATAATGTCTACTGTCCAGTCTGATTTAGAACTCC
ACCTTTCATTGCAACTGTGTCCTGACC back to topCoding sequence (CDS) from alignment at ch4:4344292..4347668+ >KJC3_005993-T1 ID=KJC3_005993-T1|Name=KJC3_005993-T1|organism=Aspergillus niger KJC3|type=CDS|length=1701bp|location=Sequence derived from alignment at ch4:4344292..4347668+ (Aspergillus niger KJC3)
ATGGCCCATCATGGCACAGGACATGCTCGCTTCAACAGAGTGATGCGCAA
GAAATATCAATTGGATTCAGCATACTTTAGCGAGACTGGGAGGAGCCCGG
GGAATCATGCGACTCCGACAATCATACCGCAGAATACGGTCGCAAATGGG
CTGGAAGGTGAACTAACCCTAGACCCAGTCATGCAGGCGCAGGATGTGCA
TGACAGTCAGGGACTGTCCCTCGAAAAGCGCCAGCAATCAAACACAGCCA
CGGGGGATCAGGCTACGGTGTCTGCGACTATCGTCAACGTGGTCGACAAC
AATTCGCAGACTAGCACCGGCACTTCGGCAACTGCACCGACAACGATATC
TGAAGAGTCGACCGTGCCCGCGACGTCGATCTCGTCAACAGAGACAGACT
CATTGCTCTTGTCGCTTTCTGCTACCGTCTCGATTGATCTATCTCTGACT
GCTTCGCCTGCGTATTCTTCTCCAACCGCAGATACCCCGGCAGTAACGAG
TACGCCTGAACCGTCCTCATCCACCCCACCATCATCTGCGCCCGCTACTT
CGAAGACATCCACTCCGCTGTTTGGCTCTACTGCTACCGCTATTCCCTCT
TCGGCTCACCCCCAACCATCCAGCGCATTGTCCAGCTCTAGTCCAACTGG
GACACAAAGCGGTAGCCAAGTGACCGCCTCCGGCTCTGCTTGGGCATTCG
GCTCCGGTTCACAGTCCACGACGACATCCTCCGTGACCCAGACGAGCTCC
GCGACGACATCCACCTTCTCATCGGACTCTACTTCCACCACTTCGCTCTA
CGGAGCCTGGGGTACGGCCTCTAATGGAGGGGGTGGAGGATCAGGGGCAA
CTGCCACCGGACAAGGTGTCTCGCCTTCATCCTCTTCGGGCAGCTCTGGC
TCTGGCTCCGGCTCCGGCTCTGGCTCTGGCTCTGGCTCCCTCAGCAGCCA
AACTAAAGGCAAGATAGCTGGTGGTGTGGTTGGTGGTGTGGCTGCTGCTA
TGTTCGTGTTCGTAATTGTTGTCTGGCTGCTTCGCCGACGCAAGAAGAAC
ATCTTGCCGCCATCTGGGGATGCCCTCCCCGAGCCGGACACGACCGGGAC
AGCCGAAGGCTCTCTCCCGCGCTCCGCAGAGATGACATCGCGGCGGTCCA
GCGACGACCCCCTGTTTACTGCGTCATACTTTGCCCCGGCTTTCATGAAG
CGATGGCGCCAGTCGCACATGACGACACGCACCGACAGTACTCTGAGCTC
CGAGCCCAGCGAACGCGGATTCCAAAAGATCTCTGGCCGGAAGATTCCTT
CAGTGCTGCAGTCAGGAGGAGACGGCTACGGCGGTGGATATGAACCGGGA
TCCCCTACTGCGTCTGAGCCGAGCACGCTTTTTTCTCCAAGCTCACCAGT
TCAGCCCCGGTCACCGCCAACACAACCGCCCGTAGCGACACCGTATGGCA
TGCCGTTGGATACCAGCTATACTCGAGAAGCGGCGGAGGTAGGAGGTGTT
GTGGTGTTTCGACCATCGCCAGCCCGCACACCAGTTACTGGGTCCGCCAA
TGCCAGTCTGTCCAATGAGCCAACCGGGCCGCGGGTCGTTTCGCAAGTCG
GGGCGCTCTCTCCGACAATGCCGAAGCGGCCTGATGCGCTCGGACGAAGC
CATCCGAGCTTCGATGGCAGTCGGGGCAGTCGGTTCACGGAGAGTATATG
A back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005993-T1.utr5p1 | KJC3_005993-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005993-T1.utr3p1 | KJC3_005993-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4344292..4347668 + |
|
