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KJC3_006002-T1, KJC3_006002-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006002-T1
Unique NameKJC3_006002-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4371107..4374584-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006002-T1 ID=KJC3_006002-T1|Name=KJC3_006002-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3478bp|location=Sequence derived from alignment at ch4:4371107..4374584- (Aspergillus niger KJC3)
GTGCCTACAATAACTACTCCTCTACTCTCCACACCATTACCCCTGATCTC
GTGATAGCTTATCAGTTGACTTGGCGACCGAACTGCGGCTGGAAGTTCCC
CAACAGCTAAACTACTGACCACCAAGTAGACTCCCAGACCCGGGCATATC
AAATCTATTGCTGGGTCTGTATAGTTGAACTCCAGATAAGACCTTCTGCC
CTTACTTTGCCATACTGGGCGCCGTCTGTTATCTGTCTGTCGCTCAGTTT
GATCGCAACCCCATTGGTTACCATGCCCAGCATGACCGCCGAGTCAAGGC
TGCGTGTGTGGATCGAAGCTGACTGCAAGCTCTGACACAGTGGTTCCAGG
ATAGTCACTACAGACCGGTTGAGTGGTTGTAAAGGGCTTTCCGGGGGTTG
AAGCTGGACGGAAGCGGAAGGTCTCATTATCGAAACCTTGGGATGTTACT
GTGTGAGAGTCCTTCTCGGTAAACACCCTTCTTACGGAGTGAGACCGGGC
TTCGAAGGCCTCGATTTTTGCCAGCTGTATAGGTGGACACCCATGTACAT
CCTCATACTGATCGATCTTGTGCCTTTCTCTTGAGGCTTTAGATCAGATC
AACACCCGTCATTCGGAGTCAGCGATCGTCAGCAGCTGATCAAGTAGCCC
TACAACCCAGAGACTGTCGATGATTGCCAAGTAGCACGAAATCAAGTTAT
ATGGGAGTGGGCGCGATCGACCAGGTAAAAGCACGAACTTGTCTCTCAGC
TCTCCTGAGTCGTGTGAAGTCCCCAGTCTCCACTGTGGCCCTGGTGTCTG
AACCGATTACTGGGTGTTCGATACGAGAGCTGCCGTACCCCGGATGCCTT
ATAGGTTGTTGCGAGAGTGCTGGAAAAACTTGTGCCATCTGGAAAGCTCT
GTGCAACGAGATTGTGGACTTGGCCAATTTCCAACATCGTCTGAACCTGG
CTGCTGATTCGAAATGGTTCACACGCCGTTGGCTCTGCAGAAGTTCGTTC
CTGGCGCCCCTGTGCCGATCGGGTTCCCACCTCCGCGGCAAGCTACGGTT
CCCGGCTTCTGCCCCAAGCTTACAACTAGTTTCTCAAGCGTGTTCGGAGT
CAAAAAGGCGATGAGCATCAATGGTCTAGCGGCTACCAAAGTTTGATCTG
AGCTAAACTTGTATGTGGGTATCGCAGAAGTCTCTGCTCTTACTTCTCTT
GGCGATTAAGTGTTTTTAGGGGCAGTTAGTTTGACAGTCTTGCCCTCTCA
CCGACGATAGTCGCGCTGAAAAATGGAGTCGTGACACTCCACGTGTGGTC
GAGAGTTCTCTGCCTCCTGGTGGCCAGGTGCTTTAAATATGCTGGTGGAT
CCAGGGTGCTAAGGCAATTTTTTGGATGTTTAACGACTCATTTATGTACA
GTATCTAGGTGTCTGGGTGCTATGGAGCCCCATCCTCTCATTTGTTTTTG
ATCCTTCGAAAGTTCCTCTAGAAACACTCATTCTTTATCATCAATTGACA
TTTCCTTGCATAATGTACTTCCTGACTTTCTATATTCGTTCTGGATACCA
AACAGAGTCATCTCAGCAATAACGGAAGCCTTGTCGCCGTGCCTGGTGTG
ACACAAGCCATCAAGAGTGATCTCGAACGGCGTCAATACCCAAGCAATAT
GTTCGACCGAAAGTTCTTGAATTCGTCCTCGACACTCGTTGTCCCTAATG
GACGTCAGAGCTCCAGACATGAGCATCGACCGCCTCTCAACTCAACCATT
ACCCTCATTCAGGCCACCACTCATGACTCAGACCGTACTTTGCCTCATGG
AAACATCCCCGAAGAGGTCCATGAGGATCAGTACAACCAGTTCTCACCTA
CCCGAAAGATTATTGTCGTTATTATCCTTTCGTATTCTGCTATCCTCGGC
CCTATATCCTCCACTGCCATTCTGGCCTCTGTCCCAGAGATTGCCAGGAC
ATTCAGAACAGACGCAGATATTATCACTGCCAGCAACGCTCTTTACCTAG
CTTCCATGGGGATAGCTGCTCTCCTCTGGGGTCCTTTGAGTCAGATCTCG
GGCCGCCGTCCGGTGAGTGGCATCTGTGCATTCATATTGTTCCTCTTACC
CCTAACAGCTAGTCCCTTAGATCCTCATTGCGAGTTCCATTCTCTTCTTT
CTTTTTACTGTGGCCACAGCGCTAGCCCCCAATCTTGAAGCCTACTTTAT
CTTCCGCATATGTGCCGCGTTTCAGGGAACCGCATTTTTAGTGCTTGGGA
GTGCCACCGTGGGCGATATTTATGAGCCAATGTCTCGAGCTTTACCACTG
GGATGGGTATTGTCAGGTAGTGTGACCGGGCCTGCCCTTGGTCCCGTTCT
AGGAGTATGTCTCATCCAAAACATACCATTCACCTGGCTGTTCTTAACTG
ACACTTTCATATATAGGGCATCATGGCTACCTTCCGCCCATGGAGATATA
TATTCTGGCTACTTGCTGCATTAAACGGCTTCGCAGCAGTCCTTTTTATG
ATATTCTTTCCGGAGACCATCAGCCACAAATCAAACGCCCATTTCAGAGG
GAAGAGCCTGCCTCAGCAGACCAAGCAGCTCTGGAACCACATCTCACCCC
TTCGCATTGCCCGCTTGGTCTTCTCTTACCCGAACATCTTTCTCACTAGC
CTCACTGCCGGCGCCTTAGTGTGGAATCAATACGCCCTTCTCACGCCTAT
TCGCTACGTTCTTAACCCTCGCTTTCACCTGGAAAGCCCCATTGAAGCCG
GCCTCTTCTACCTCGGCCCCGGTGGCGGCTACATAGCCGGCACCTTCTTT
GGTGGCCGTTGGGCCGATCTTGTGGCTCGGAAATACACTCGTATCCGCAA
CGGACGACGTATACCTGAAGACCGTCTCCGCTCTTGTGTATCCTTCATCT
TAATTGCTATCCCAGCATGCATCCTTGTTTATGGCTGGACAGTTGACAAA
GAAGTCGGGGGCATCCCAGTTCCCGTCGTCGCTATGTTTCTGCAAGGAGT
AGCCACAATGTTCTGCTTCCCCAGTCTGAACACTTACGGATTGGATGTTA
TGCAAGAGAGTGGTAGAAGCGAGGAGGTCGTCGCGGCGAACTTTGTTTGC
CGGTATATGTTTGCTGCTCTCGGGACGGGTGTTGTCCTACCTGCACTTAA
GGCAATGGGCGTGGGGTGGTTCAGTACCATCTCGGCGCTGTTTCTGATAG
CTGTCGGTGGTGGATTATATCTGACCGCGGAATATGGCCCTCGATGGAGG
GAGGCTGTTGATGCAAAGCTTCAGGCTAAAGGGGAAGAAAAGGGGAGAGA
ACACGCCCTAGAGCATGTTTAATCTCTTGCGACCCATTGGGTCGTCACGT
CACAAGCATAATACCCAACTGCATTAATGATTAATCTCGGCCGTGTCGCG
ACCGGAATGACATTCCATGGTGGATTTTCTTATTCTAATGTACATATCAG
AGATTTAGCACATTAAGTTATTGGCTTG
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Coding sequence (CDS) from alignment at ch4:4371107..4374584-

>KJC3_006002-T1 ID=KJC3_006002-T1|Name=KJC3_006002-T1|organism=Aspergillus niger KJC3|type=CDS|length=4662bp|location=Sequence derived from alignment at ch4:4371107..4374584- (Aspergillus niger KJC3)
GGCATCATGGCTACCTTCCGCCCATGGAGATATATATTCTGGCTACTTGC
TGCATTAAACGGCTTCGCAGCAGTCCTTTTTATGATATTCTTTCCGGAGA
CCATCAGCCACAAATCAAACGCCCATTTCAGAGGGAAGAGCCTGCCTCAG
CAGACCAAGCAGCTCTGGAACCACATCTCACCCCTTCGCATTGCCCGCTT
GGTCTTCTCTTACCCGAACATCTTTCTCACTAGCCTCACTGCCGGCGCCT
TAGTGTGGAATCAATACGCCCTTCTCACGCCTATTCGCTACGTTCTTAAC
CCTCGCTTTCACCTGGAAAGCCCCATTGAAGCCGGCCTCTTCTACCTCGG
CCCCGGTGGCGGCTACATAGCCGGCACCTTCTTTGGTGGCCGTTGGGCCG
ATCTTGTGGCTCGGAAATACACTCGTATCCGCAACGGACGACGTATACCT
GAAGACCGTCTCCGCTCTTGTGTATCCTTCATCTTAATTGCTATCCCAGC
ATGCATCCTTGTTTATGGCTGGACAGTTGACAAAGAAGTCGGGGGCATCC
CAGTTCCCGTCGTCGCTATGTTTCTGCAAGGAGTAGCCACAATGTTCTGC
TTCCCCAGTCTGAACACTTACGGATTGGATGTTATGCAAGAGAGTGGTAG
AAGCGAGGAGGTCGTCGCGGCGAACTTTGTTTGCCGGTATATGTTTGCTG
CTCTCGGGACGGGTGTTGTCCTACCTGCACTTAAGGCAATGGGCGTGGGG
TGGTTCAGTACCATCTCGGCGCTGTTTCTGATAGCTGTCGGTGGTGGATT
ATATCTGACCGCGGAATATGGCCCTCGATGGAGGGAGGCTGTTGATGCAA
AGCTTCAGGCTAAAGGGGAAGAAAAGGGGAGAGAACACGCCCTAGAGCAT
GTTTAAATCCTCATTGCGAGTTCCATTCTCTTCTTTCTTTTTACTGTGGC
CACAGCGCTAGCCCCCAATCTTGAAGCCTACTTTATCTTCCGCATATGTG
CCGCGTTTCAGGGAACCGCATTTTTAGTGCTTGGGAGTGCCACCGTGGGC
GATATTTATGAGCCAATGTCTCGAGCTTTACCACTGGGATGGGTATTGTC
AGGTAGTGTGACCGGGCCTGCCCTTGGTCCCGTTCTAGGAATGTTCGACC
GAAAGTTCTTGAATTCGTCCTCGACACTCGTTGTCCCTAATGGACGTCAG
AGCTCCAGACATGAGCATCGACCGCCTCTCAACTCAACCATTACCCTCAT
TCAGGCCACCACTCATGACTCAGACCGTACTTTGCCTCATGGAAACATCC
CCGAAGAGGTCCATGAGGATCAGTACAACCAGTTCTCACCTACCCGAAAG
ATTATTGTCGTTATTATCCTTTCGTATTCTGCTATCCTCGGCCCTATATC
CTCCACTGCCATTCTGGCCTCTGTCCCAGAGATTGCCAGGACATTCAGAA
CAGACGCAGATATTATCACTGCCAGCAACGCTCTTTACCTAGCTTCCATG
GGGATAGCTGCTCTCCTCTGGGGTCCTTTGAGTCAGATCTCGGGCCGCCG
TCCGGGCATCATGGCTACCTTCCGCCCATGGAGATATATATTCTGGCTAC
TTGCTGCATTAAACGGCTTCGCAGCAGTCCTTTTTATGATATTCTTTCCG
GAGACCATCAGCCACAAATCAAACGCCCATTTCAGAGGGAAGAGCCTGCC
TCAGCAGACCAAGCAGCTCTGGAACCACATCTCACCCCTTCGCATTGCCC
GCTTGGTCTTCTCTTACCCGAACATCTTTCTCACTAGCCTCACTGCCGGC
GCCTTAGTGTGGAATCAATACGCCCTTCTCACGCCTATTCGCTACGTTCT
TAACCCTCGCTTTCACCTGGAAAGCCCCATTGAAGCCGGCCTCTTCTACC
TCGGCCCCGGTGGCGGCTACATAGCCGGCACCTTCTTTGGTGGCCGTTGG
GCCGATCTTGTGGCTCGGAAATACACTCGTATCCGCAACGGACGACGTAT
ACCTGAAGACCGTCTCCGCTCTTGTGTATCCTTCATCTTAATTGCTATCC
CAGCATGCATCCTTGTTTATGGCTGGACAGTTGACAAAGAAGTCGGGGGC
ATCCCAGTTCCCGTCGTCGCTATGTTTCTGCAAGGAGTAGCCACAATGTT
CTGCTTCCCCAGTCTGAACACTTACGGATTGGATGTTATGCAAGAGAGTG
GTAGAAGCGAGGAGGTCGTCGCGGCGAACTTTGTTTGCCGGTATATGTTT
GCTGCTCTCGGGACGGGTGTTGTCCTACCTGCACTTAAGGCAATGGGCGT
GGGGTGGTTCAGTACCATCTCGGCGCTGTTTCTGATAGCTGTCGGTGGTG
GATTATATCTGACCGCGGAATATGGCCCTCGATGGAGGGAGGCTGTTGAT
GCAAAGCTTCAGGCTAAAGGGGAAGAAAAGGGGAGAGAACACGCCCTAGA
GCATGTTTAAATCCTCATTGCGAGTTCCATTCTCTTCTTTCTTTTTACTG
TGGCCACAGCGCTAGCCCCCAATCTTGAAGCCTACTTTATCTTCCGCATA
TGTGCCGCGTTTCAGGGAACCGCATTTTTAGTGCTTGGGAGTGCCACCGT
GGGCGATATTTATGAGCCAATGTCTCGAGCTTTACCACTGGGATGGGTAT
TGTCAGGTAGTGTGACCGGGCCTGCCCTTGGTCCCGTTCTAGGAATGTTC
GACCGAAAGTTCTTGAATTCGTCCTCGACACTCGTTGTCCCTAATGGACG
TCAGAGCTCCAGACATGAGCATCGACCGCCTCTCAACTCAACCATTACCC
TCATTCAGGCCACCACTCATGACTCAGACCGTACTTTGCCTCATGGAAAC
ATCCCCGAAGAGGTCCATGAGGATCAGTACAACCAGTTCTCACCTACCCG
AAAGATTATTGTCGTTATTATCCTTTCGTATTCTGCTATCCTCGGCCCTA
TATCCTCCACTGCCATTCTGGCCTCTGTCCCAGAGATTGCCAGGACATTC
AGAACAGACGCAGATATTATCACTGCCAGCAACGCTCTTTACCTAGCTTC
CATGGGGATAGCTGCTCTCCTCTGGGGTCCTTTGAGTCAGATCTCGGGCC
GCCGTCCGGGCATCATGGCTACCTTCCGCCCATGGAGATATATATTCTGG
CTACTTGCTGCATTAAACGGCTTCGCAGCAGTCCTTTTTATGATATTCTT
TCCGGAGACCATCAGCCACAAATCAAACGCCCATTTCAGAGGGAAGAGCC
TGCCTCAGCAGACCAAGCAGCTCTGGAACCACATCTCACCCCTTCGCATT
GCCCGCTTGGTCTTCTCTTACCCGAACATCTTTCTCACTAGCCTCACTGC
CGGCGCCTTAGTGTGGAATCAATACGCCCTTCTCACGCCTATTCGCTACG
TTCTTAACCCTCGCTTTCACCTGGAAAGCCCCATTGAAGCCGGCCTCTTC
TACCTCGGCCCCGGTGGCGGCTACATAGCCGGCACCTTCTTTGGTGGCCG
TTGGGCCGATCTTGTGGCTCGGAAATACACTCGTATCCGCAACGGACGAC
GTATACCTGAAGACCGTCTCCGCTCTTGTGTATCCTTCATCTTAATTGCT
ATCCCAGCATGCATCCTTGTTTATGGCTGGACAGTTGACAAAGAAGTCGG
GGGCATCCCAGTTCCCGTCGTCGCTATGTTTCTGCAAGGAGTAGCCACAA
TGTTCTGCTTCCCCAGTCTGAACACTTACGGATTGGATGTTATGCAAGAG
AGTGGTAGAAGCGAGGAGGTCGTCGCGGCGAACTTTGTTTGCCGGTATAT
GTTTGCTGCTCTCGGGACGGGTGTTGTCCTACCTGCACTTAAGGCAATGG
GCGTGGGGTGGTTCAGTACCATCTCGGCGCTGTTTCTGATAGCTGTCGGT
GGTGGATTATATCTGACCGCGGAATATGGCCCTCGATGGAGGGAGGCTGT
TGATGCAAAGCTTCAGGCTAAAGGGGAAGAAAAGGGGAGAGAACACGCCC
TAGAGCATGTTTAAATCCTCATTGCGAGTTCCATTCTCTTCTTTCTTTTT
ACTGTGGCCACAGCGCTAGCCCCCAATCTTGAAGCCTACTTTATCTTCCG
CATATGTGCCGCGTTTCAGGGAACCGCATTTTTAGTGCTTGGGAGTGCCA
CCGTGGGCGATATTTATGAGCCAATGTCTCGAGCTTTACCACTGGGATGG
GTATTGTCAGGTAGTGTGACCGGGCCTGCCCTTGGTCCCGTTCTAGGAAT
GTTCGACCGAAAGTTCTTGAATTCGTCCTCGACACTCGTTGTCCCTAATG
GACGTCAGAGCTCCAGACATGAGCATCGACCGCCTCTCAACTCAACCATT
ACCCTCATTCAGGCCACCACTCATGACTCAGACCGTACTTTGCCTCATGG
AAACATCCCCGAAGAGGTCCATGAGGATCAGTACAACCAGTTCTCACCTA
CCCGAAAGATTATTGTCGTTATTATCCTTTCGTATTCTGCTATCCTCGGC
CCTATATCCTCCACTGCCATTCTGGCCTCTGTCCCAGAGATTGCCAGGAC
ATTCAGAACAGACGCAGATATTATCACTGCCAGCAACGCTCTTTACCTAG
CTTCCATGGGGATAGCTGCTCTCCTCTGGGGTCCTTTGAGTCAGATCTCG
GGCCGCCGTCCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006002KJC3_006002Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006002-T1KJC3_006002-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006002-T1.cdsKJC3_006002-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006002-T1.utr3p1KJC3_006002-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006002-T1.exon5KJC3_006002-T1.exon5Aspergillus niger KJC3exon
KJC3_006002-T1.exon4KJC3_006002-T1.exon4Aspergillus niger KJC3exon
KJC3_006002-T1.exon3KJC3_006002-T1.exon3Aspergillus niger KJC3exon
KJC3_006002-T1.exon2KJC3_006002-T1.exon2Aspergillus niger KJC3exon
KJC3_006002-T1.exon1KJC3_006002-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006002-T1.utr5p3KJC3_006002-T1.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_006002-T1.utr5p2KJC3_006002-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_006002-T1.utr5p1KJC3_006002-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4371107..4374584 -
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