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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4384550..4388538- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006007-T1 ID=KJC3_006007-T1|Name=KJC3_006007-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3989bp|location=Sequence derived from alignment at ch4:4384550..4388538- (Aspergillus niger KJC3)
CACCTCGAACCCCATCCATTCAATGAACTCGATCTGCTGCTAAGTAGTAG
TCTTTCCCTACTAAACTTTCTGCACCTCCTCCCCCTTCACCTCTAATTAT
TATTTCCTTTTTATCTTTTCTTGTGTCTTTTGCATCCTTTTTCTATCTCT
CGACTCTTTCGGTCTCTTTCTTCTCCTCTTTCCTCCCTCCCAAAACAAAA
TCCCGGCGGCCCTTGTGTGCCCTTAGTGGTTCTGGTGCTGACCTCTCTCG
TGAGGCTGCATCTCATCATTGCTACCGTACTAAGTTACGACCTTTTTACC
CGCTTTTTCTTCCCACTAGCCGCACCTTGATTTCCTCCCTTCGTCCACGT
TGGGTCCTCTCCGATTCCTTCATCTTATTTCTCCATACGGGAGAACCATA
AATACCATCAACAGATATGTCTGAAGTTCAAACAAGGCCTTCTGCCTCTC
GTGGCAGGGTATCTGCCCGTGGTGGCCGTGGCGGCTATAGCTCCAGAGGT
GGTCGAGGTGGTAGCAGATCCACAAAGGCAGACAACTCAGACGGCGCACC
CACCGCATTTGAAGACGAGGGAGAACTTGGTCAGATGAAGAAGAAATACT
CGGATACTCTGCCCATGCTGAAGGAGCTGTTCTCTGATTGGACTGATGAG
GATCTGGTCTTCGCTCTGGAGGATGCAAATGGTGACCTTGAGGAGGCAAT
TGATCGCATTAGTGAAGGTATGGTTCCCTACTGCTACTTGGGATAGCTCA
GTGCTTCTGGGTTTTGCTGACGCTGCTGCTTCTATTCGCACAGGCAATGT
CGCTCAATGGGGCGAGGTAAAGAAGAAGACTACGGACCGCAGCCGCCCTA
AGACCAAGGAGGTACAGAGCACTCCTGTCGAGACAGTCGCCCCCTCGGTT
CGAGGTCGTGGCCGTGGTGGCTTTGAAAGTCGTGGTCGCGCCCGTGGTGA
CCGTGGTCGTGGAGGTCGTGGTGGTCGGGCCGGTGCTCATACCAATGGAA
CTCGCACGGAGAAGCCAGCTGTCGCCACTTCTGTCGAGGAGACCACAGCT
ACGACTACGACTGCTCCTGAGCCTGCCGCGGCTATCAAGTCCGAAAAGAC
CGTCGATGCCGAGCCAGCTGCTGCAGAAACTGTTGACGACAGCGCTAAGG
AGGCACCCAAGAGCAGTGTGATCCCGGAGGGCACAAAGAAGGGTTGGGCT
AGCTTGTTTGCCAAACCGGCGCCGCCGCCTCCTCAGAAGAAACCTGCCGC
TCCTGCTCCTGCTCCTGCTCCTGCTGCCGCTGCCGCTCCTGCTACCACCG
CTGCCCCTGCCCCTGCCCCCGAGAAGCCTGCTGCTGCGCCTGTAACGGAG
CAGAAGCCAGCTGAACCCGCACCAGCTCCTGCCCCAGCCCCGGCTCCCGC
CCAGGCTCCTGTTCCCGTCCCAATTCCTATCCCCGTTCCTGTCCCTGCCG
AAAAAGCACCCGAACCAGCTGTTCCTCAACCTCAACCGACCGCAGAAGAA
GCTCCTGTAGCTACTCCATCTCCCGCTGATGTCCCCGCTCCGAAGGATGA
TTTGACGAAGAACAACCTTGCCCAGATCCCCGATGTCTCTCCTCCTGCTC
CCACGGCTACCGCAGCTAGCACCGTGGGCAGTGCCCTTGACACTACTCAT
CTTGCAGCGGTTGCCACTCCCACCCGCGCTGCTCCTGGAACTTACCCCTC
GAGTGCCTTCAAGCAGAGCACACGCACCCCTGGCACTCAACGTCGTGTGA
TGGAACAACAGGAGGCTGTGGTCATGCCAGGAAACCATGCTGTGGATCGT
GCTGCGGTCCAATTTGGTAGCATGGGATTGAACGGAGATGCCGCCGATGT
TGACATTGATGAGAACAGAGAAGAAGCTGAGACCCGTGCTCAGCCCCCTC
AACACTCCCCTGTTGCTCCTCGAGCCTCGTTGCCTCCTTCCACGCAGACT
CAGGTTCCTACTGAAACCCCTGCAGTCTCTCGCCCGGCCCCGGGACTTCC
TCCCGTGCCCCAGGTCTCTGCCGCTGAAAACTCTTTCACTGATTTCGCCC
GCTACACCGACGCTCATAAGCCCTACGACCCCTTCACCCAGCAGGTCACG
CAGCCTCAACCTCAGATCCAGGAGCCATTTGCCAACCAAGCTCCTGTCCA
GCCTACCGTCACGACCGGTAGCGAGTATTCTCCGTTCTATGCCGTCGACC
AACGTCTTCCTTACAACTACTACGGCACATACGGTCAGTCTCAAGATGCC
ACGGTCGCTGCCCAGAGAGCAGGATTTGGTGTTTCTGGCGCCGAAGTGCA
ACCGCATATTCCTACCACTCAGCCTCCTAGCCGCTATGGCCATGTTGAAG
CTCCCAACAGTGGCCACACCACTCCTAACCCCACCCTTCCTGGCGCTACT
CAGACCCCTACGGCTCAGCACATGCCTGGCCAGGGCGCTCACAGCTACGG
ATACGGATACCCGTACTACTCCAACCCTCACTATGCTTCGTACATTGGCC
AGATGAACCAGTACGGCAGGAACCGCCCGATGTACGATGATGCCCGGAGA
TATGATGACCACTACCTTCCTCACAGCACTCAATATGGTTACGGCAGCCA
ATATGGCCCGTACGGAAAGGCTGGAATGTATGGTCAGCCTCACGCCTTCT
CTTATGACCACTCGTCGTCGCCCGCGACAGCGGCCACCTTCAACCAGGCC
ATTCCCGGTCGTGACTCGGTCTACGGCCGCACTGGATCCGCCCAGCCATC
CGAGACTCAGCAGTCGGCAGCCGCCGGATCCAATGCCTTCGCAACTGGCA
TGTCGGACGTCTTCGGTCGCACTCAAGGCGGCTTCGGACAGAACCAGCCG
ATCACCCAGCAGCCTCCGGTGACCACGGAGGAGACGAAGAGCTTCGATAC
CCCGAAGGCTGCGGGGCCCAGCCCTTCTCTTGCCCAGGCTAACCGTCCCG
GTTCCGCAACCAACAGCGCCCCTGGTCAGCCTCAGGCCCAAACCGGCCTT
CCCCCGCTGCAGGGCCAGCAGGGTCAGCAGGGATTCGGTGGCTACCCTCA
CCTGAACCCTCAGTATGGTGGATTGGGTGCCCTGGGCGGCCATCAGGCTG
CAGCCAGCCAGACCCACCACCAACCCACTGGATACGGTAACTACGGCGGC
GCGGGTTTCGCTAACTACTACGGAAACTCTGGACGTGGAGGCTGGGGAGG
CAATTACGGTCACTAAAGGCTTATGGCGTTGCATCTTTTCCGGGTGATGG
GATTCCTATTGGCTCGTTTCTTTTTCTCTTTTACCTCGGGCGCGGCAAGC
CCTGGATTGAAAACCTATCTCCTCTTATATTCACTTGTTAACACTTTTTC
CCCCCTCTGTCACTCTCACGTGTGTAATCTTTACTCTCAATGAGAGCTTG
GCTGGTTTTACATCTTTGGTTGATCTTTTCTGCAGGGTTGCGCTCATGAT
GTATTGAATGGAAAAAAACGTTATCGCTTTGTTTTATTTTTACTTATGTT
GCTTGTTCACGGTTTTACGACATTTGCCAGTGTCTTCCTATTATATTCAG
ACGTCTTTTTTTCCTACGCCACCTCTTCTCCTTTGCTCTCCGGCTTTTGC
CCCTTCTCGATTCGGTGTCTGATGAAAACCTTTCCATGATCTCTCTTGCT
CTCATCTACCTTGCATACTTTCCGCTTCCTGTACTACTTCTTTGGGTTCG
GTTGGGACATCGTTCATGCAAATTGGCTGGATTAGGACAAGGGATGGGGG
TTAAAGAATGCAAAGAATTGACTGGGACGGCGTTGGACCTTGCTTTATCT
TCCGGTGTACAAAAAGTAACTCGCTATAGAGACGGTGACGAGGGAAAAGA
CACAATGGAGTGGCGTGTGCGTTCCGAGCCTGAATCCGGGTCTTTCCCGA
CACCGTAACCACGGCCGCAGCTGTTGACTTGACTTGGCTTGTGCCGTGTA
GATGTAGTCTTGGGCTGACAACTATGCTATAGATGATGG back to topCoding sequence (CDS) from alignment at ch4:4384550..4388538- >KJC3_006007-T1 ID=KJC3_006007-T1|Name=KJC3_006007-T1|organism=Aspergillus niger KJC3|type=CDS|length=5448bp|location=Sequence derived from alignment at ch4:4384550..4388538- (Aspergillus niger KJC3)
GCAATGTCGCTCAATGGGGCGAGGTAAAGAAGAAGACTACGGACCGCAGC
CGCCCTAAGACCAAGGAGGTACAGAGCACTCCTGTCGAGACAGTCGCCCC
CTCGGTTCGAGGTCGTGGCCGTGGTGGCTTTGAAAGTCGTGGTCGCGCCC
GTGGTGACCGTGGTCGTGGAGGTCGTGGTGGTCGGGCCGGTGCTCATACC
AATGGAACTCGCACGGAGAAGCCAGCTGTCGCCACTTCTGTCGAGGAGAC
CACAGCTACGACTACGACTGCTCCTGAGCCTGCCGCGGCTATCAAGTCCG
AAAAGACCGTCGATGCCGAGCCAGCTGCTGCAGAAACTGTTGACGACAGC
GCTAAGGAGGCACCCAAGAGCAGTGTGATCCCGGAGGGCACAAAGAAGGG
TTGGGCTAGCTTGTTTGCCAAACCGGCGCCGCCGCCTCCTCAGAAGAAAC
CTGCCGCTCCTGCTCCTGCTCCTGCTCCTGCTGCCGCTGCCGCTCCTGCT
ACCACCGCTGCCCCTGCCCCTGCCCCCGAGAAGCCTGCTGCTGCGCCTGT
AACGGAGCAGAAGCCAGCTGAACCCGCACCAGCTCCTGCCCCAGCCCCGG
CTCCCGCCCAGGCTCCTGTTCCCGTCCCAATTCCTATCCCCGTTCCTGTC
CCTGCCGAAAAAGCACCCGAACCAGCTGTTCCTCAACCTCAACCGACCGC
AGAAGAAGCTCCTGTAGCTACTCCATCTCCCGCTGATGTCCCCGCTCCGA
AGGATGATTTGACGAAGAACAACCTTGCCCAGATCCCCGATGTCTCTCCT
CCTGCTCCCACGGCTACCGCAGCTAGCACCGTGGGCAGTGCCCTTGACAC
TACTCATCTTGCAGCGGTTGCCACTCCCACCCGCGCTGCTCCTGGAACTT
ACCCCTCGAGTGCCTTCAAGCAGAGCACACGCACCCCTGGCACTCAACGT
CGTGTGATGGAACAACAGGAGGCTGTGGTCATGCCAGGAAACCATGCTGT
GGATCGTGCTGCGGTCCAATTTGGTAGCATGGGATTGAACGGAGATGCCG
CCGATGTTGACATTGATGAGAACAGAGAAGAAGCTGAGACCCGTGCTCAG
CCCCCTCAACACTCCCCTGTTGCTCCTCGAGCCTCGTTGCCTCCTTCCAC
GCAGACTCAGGTTCCTACTGAAACCCCTGCAGTCTCTCGCCCGGCCCCGG
GACTTCCTCCCGTGCCCCAGGTCTCTGCCGCTGAAAACTCTTTCACTGAT
TTCGCCCGCTACACCGACGCTCATAAGCCCTACGACCCCTTCACCCAGCA
GGTCACGCAGCCTCAACCTCAGATCCAGGAGCCATTTGCCAACCAAGCTC
CTGTCCAGCCTACCGTCACGACCGGTAGCGAGTATTCTCCGTTCTATGCC
GTCGACCAACGTCTTCCTTACAACTACTACGGCACATACGGTCAGTCTCA
AGATGCCACGGTCGCTGCCCAGAGAGCAGGATTTGGTGTTTCTGGCGCCG
AAGTGCAACCGCATATTCCTACCACTCAGCCTCCTAGCCGCTATGGCCAT
GTTGAAGCTCCCAACAGTGGCCACACCACTCCTAACCCCACCCTTCCTGG
CGCTACTCAGACCCCTACGGCTCAGCACATGCCTGGCCAGGGCGCTCACA
GCTACGGATACGGATACCCGTACTACTCCAACCCTCACTATGCTTCGTAC
ATTGGCCAGATGAACCAGTACGGCAGGAACCGCCCGATGTACGATGATGC
CCGGAGATATGATGACCACTACCTTCCTCACAGCACTCAATATGGTTACG
GCAGCCAATATGGCCCGTACGGAAAGGCTGGAATGTATGGTCAGCCTCAC
GCCTTCTCTTATGACCACTCGTCGTCGCCCGCGACAGCGGCCACCTTCAA
CCAGGCCATTCCCGGTCGTGACTCGGTCTACGGCCGCACTGGATCCGCCC
AGCCATCCGAGACTCAGCAGTCGGCAGCCGCCGGATCCAATGCCTTCGCA
ACTGGCATGTCGGACGTCTTCGGTCGCACTCAAGGCGGCTTCGGACAGAA
CCAGCCGATCACCCAGCAGCCTCCGGTGACCACGGAGGAGACGAAGAGCT
TCGATACCCCGAAGGCTGCGGGGCCCAGCCCTTCTCTTGCCCAGGCTAAC
CGTCCCGGTTCCGCAACCAACAGCGCCCCTGGTCAGCCTCAGGCCCAAAC
CGGCCTTCCCCCGCTGCAGGGCCAGCAGGGTCAGCAGGGATTCGGTGGCT
ACCCTCACCTGAACCCTCAGTATGGTGGATTGGGTGCCCTGGGCGGCCAT
CAGGCTGCAGCCAGCCAGACCCACCACCAACCCACTGGATACGGTAACTA
CGGCGGCGCGGGTTTCGCTAACTACTACGGAAACTCTGGACGTGGAGGCT
GGGGAGGCAATTACGGTCACTAAATGTCTGAAGTTCAAACAAGGCCTTCT
GCCTCTCGTGGCAGGGTATCTGCCCGTGGTGGCCGTGGCGGCTATAGCTC
CAGAGGTGGTCGAGGTGGTAGCAGATCCACAAAGGCAGACAACTCAGACG
GCGCACCCACCGCATTTGAAGACGAGGGAGAACTTGGTCAGATGAAGAAG
AAATACTCGGATACTCTGCCCATGCTGAAGGAGCTGTTCTCTGATTGGAC
TGATGAGGATCTGGTCTTCGCTCTGGAGGATGCAAATGGTGACCTTGAGG
AGGCAATTGATCGCATTAGTGAAGGCAATGTCGCTCAATGGGGCGAGGTA
AAGAAGAAGACTACGGACCGCAGCCGCCCTAAGACCAAGGAGGTACAGAG
CACTCCTGTCGAGACAGTCGCCCCCTCGGTTCGAGGTCGTGGCCGTGGTG
GCTTTGAAAGTCGTGGTCGCGCCCGTGGTGACCGTGGTCGTGGAGGTCGT
GGTGGTCGGGCCGGTGCTCATACCAATGGAACTCGCACGGAGAAGCCAGC
TGTCGCCACTTCTGTCGAGGAGACCACAGCTACGACTACGACTGCTCCTG
AGCCTGCCGCGGCTATCAAGTCCGAAAAGACCGTCGATGCCGAGCCAGCT
GCTGCAGAAACTGTTGACGACAGCGCTAAGGAGGCACCCAAGAGCAGTGT
GATCCCGGAGGGCACAAAGAAGGGTTGGGCTAGCTTGTTTGCCAAACCGG
CGCCGCCGCCTCCTCAGAAGAAACCTGCCGCTCCTGCTCCTGCTCCTGCT
CCTGCTGCCGCTGCCGCTCCTGCTACCACCGCTGCCCCTGCCCCTGCCCC
CGAGAAGCCTGCTGCTGCGCCTGTAACGGAGCAGAAGCCAGCTGAACCCG
CACCAGCTCCTGCCCCAGCCCCGGCTCCCGCCCAGGCTCCTGTTCCCGTC
CCAATTCCTATCCCCGTTCCTGTCCCTGCCGAAAAAGCACCCGAACCAGC
TGTTCCTCAACCTCAACCGACCGCAGAAGAAGCTCCTGTAGCTACTCCAT
CTCCCGCTGATGTCCCCGCTCCGAAGGATGATTTGACGAAGAACAACCTT
GCCCAGATCCCCGATGTCTCTCCTCCTGCTCCCACGGCTACCGCAGCTAG
CACCGTGGGCAGTGCCCTTGACACTACTCATCTTGCAGCGGTTGCCACTC
CCACCCGCGCTGCTCCTGGAACTTACCCCTCGAGTGCCTTCAAGCAGAGC
ACACGCACCCCTGGCACTCAACGTCGTGTGATGGAACAACAGGAGGCTGT
GGTCATGCCAGGAAACCATGCTGTGGATCGTGCTGCGGTCCAATTTGGTA
GCATGGGATTGAACGGAGATGCCGCCGATGTTGACATTGATGAGAACAGA
GAAGAAGCTGAGACCCGTGCTCAGCCCCCTCAACACTCCCCTGTTGCTCC
TCGAGCCTCGTTGCCTCCTTCCACGCAGACTCAGGTTCCTACTGAAACCC
CTGCAGTCTCTCGCCCGGCCCCGGGACTTCCTCCCGTGCCCCAGGTCTCT
GCCGCTGAAAACTCTTTCACTGATTTCGCCCGCTACACCGACGCTCATAA
GCCCTACGACCCCTTCACCCAGCAGGTCACGCAGCCTCAACCTCAGATCC
AGGAGCCATTTGCCAACCAAGCTCCTGTCCAGCCTACCGTCACGACCGGT
AGCGAGTATTCTCCGTTCTATGCCGTCGACCAACGTCTTCCTTACAACTA
CTACGGCACATACGGTCAGTCTCAAGATGCCACGGTCGCTGCCCAGAGAG
CAGGATTTGGTGTTTCTGGCGCCGAAGTGCAACCGCATATTCCTACCACT
CAGCCTCCTAGCCGCTATGGCCATGTTGAAGCTCCCAACAGTGGCCACAC
CACTCCTAACCCCACCCTTCCTGGCGCTACTCAGACCCCTACGGCTCAGC
ACATGCCTGGCCAGGGCGCTCACAGCTACGGATACGGATACCCGTACTAC
TCCAACCCTCACTATGCTTCGTACATTGGCCAGATGAACCAGTACGGCAG
GAACCGCCCGATGTACGATGATGCCCGGAGATATGATGACCACTACCTTC
CTCACAGCACTCAATATGGTTACGGCAGCCAATATGGCCCGTACGGAAAG
GCTGGAATGTATGGTCAGCCTCACGCCTTCTCTTATGACCACTCGTCGTC
GCCCGCGACAGCGGCCACCTTCAACCAGGCCATTCCCGGTCGTGACTCGG
TCTACGGCCGCACTGGATCCGCCCAGCCATCCGAGACTCAGCAGTCGGCA
GCCGCCGGATCCAATGCCTTCGCAACTGGCATGTCGGACGTCTTCGGTCG
CACTCAAGGCGGCTTCGGACAGAACCAGCCGATCACCCAGCAGCCTCCGG
TGACCACGGAGGAGACGAAGAGCTTCGATACCCCGAAGGCTGCGGGGCCC
AGCCCTTCTCTTGCCCAGGCTAACCGTCCCGGTTCCGCAACCAACAGCGC
CCCTGGTCAGCCTCAGGCCCAAACCGGCCTTCCCCCGCTGCAGGGCCAGC
AGGGTCAGCAGGGATTCGGTGGCTACCCTCACCTGAACCCTCAGTATGGT
GGATTGGGTGCCCTGGGCGGCCATCAGGCTGCAGCCAGCCAGACCCACCA
CCAACCCACTGGATACGGTAACTACGGCGGCGCGGGTTTCGCTAACTACT
ACGGAAACTCTGGACGTGGAGGCTGGGGAGGCAATTACGGTCACTAAATG
TCTGAAGTTCAAACAAGGCCTTCTGCCTCTCGTGGCAGGGTATCTGCCCG
TGGTGGCCGTGGCGGCTATAGCTCCAGAGGTGGTCGAGGTGGTAGCAGAT
CCACAAAGGCAGACAACTCAGACGGCGCACCCACCGCATTTGAAGACGAG
GGAGAACTTGGTCAGATGAAGAAGAAATACTCGGATACTCTGCCCATGCT
GAAGGAGCTGTTCTCTGATTGGACTGATGAGGATCTGGTCTTCGCTCTGG
AGGATGCAAATGGTGACCTTGAGGAGGCAATTGATCGCATTAGTGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006007-T1.utr3p1 | KJC3_006007-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006007-T1.utr5p1 | KJC3_006007-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009060 |
| DBxref | InterPro:IPR041803 |
| DBxref | InterPro:IPR003892 |
| DBxref | PFAM:PF02845 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4384550..4388538 - |
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