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KJC3_006021-T1, KJC3_006021-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006021-T1
Unique NameKJC3_006021-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4419113..4419582-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006021-T1 ID=KJC3_006021-T1|Name=KJC3_006021-T1|organism=Aspergillus niger KJC3|type=mRNA|length=470bp|location=Sequence derived from alignment at ch4:4419113..4419582- (Aspergillus niger KJC3)
ATGCCCAAGGAGAAGACCACCCGCAAGACCAAGCCCCGTGGCACTGAGCG
CAGAAAGAAGGGTATGTATGCCTTGCTCTATCTTCGGAACTCATGCTAAT
GCATAGCTCAGACCCCAACGCTCCCAAGCGTGGTCTCTCTGCCTACATGT
TCTTCGCCAACGACAACCGTGAGAAGGTTCGCGAGGAGAACCCTGGCATC
TCTTTCGGTAAGTCACTTCTGGACCTTGAATGGGAATGTAGGCGTCTAAC
TTCATGCAGGCCAAGTCGGCAAGATGCTCGGAGAGCGGTGGAAGGCTCTG
AGCGACACTGACCGTCGCCCTTACGAGGAGAAGGCTGCCGCTGATAAGAA
GCGTTACGAAGACGAGAAGGCCAGCTACAACGTAAGTTGACACTCCTGCC
GTTTCTTTGTCAGCCAATGCTAATGAACTTTGAACAGGCGGCTGCTGAGG
AGGACGAGGAATCATCCTAA
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Coding sequence (CDS) from alignment at ch4:4419113..4419582-

>KJC3_006021-T1 ID=KJC3_006021-T1|Name=KJC3_006021-T1|organism=Aspergillus niger KJC3|type=CDS|length=1248bp|location=Sequence derived from alignment at ch4:4419113..4419582- (Aspergillus niger KJC3)
GCGGCTGCTGAGGAGGACGAGGAATCATCCTAAGCCAAGTCGGCAAGATG
CTCGGAGAGCGGTGGAAGGCTCTGAGCGACACTGACCGTCGCCCTTACGA
GGAGAAGGCTGCCGCTGATAAGAAGCGTTACGAAGACGAGAAGGCCAGCT
ACAACACCCCAACGCTCCCAAGCGTGGTCTCTCTGCCTACATGTTCTTCG
CCAACGACAACCGTGAGAAGGTTCGCGAGGAGAACCCTGGCATCTCTTTC
GATGCCCAAGGAGAAGACCACCCGCAAGACCAAGCCCCGTGGCACTGAGC
GCAGAAAGAAGGGCGGCTGCTGAGGAGGACGAGGAATCATCCTAAGCCAA
GTCGGCAAGATGCTCGGAGAGCGGTGGAAGGCTCTGAGCGACACTGACCG
TCGCCCTTACGAGGAGAAGGCTGCCGCTGATAAGAAGCGTTACGAAGACG
AGAAGGCCAGCTACAACACCCCAACGCTCCCAAGCGTGGTCTCTCTGCCT
ACATGTTCTTCGCCAACGACAACCGTGAGAAGGTTCGCGAGGAGAACCCT
GGCATCTCTTTCGATGCCCAAGGAGAAGACCACCCGCAAGACCAAGCCCC
GTGGCACTGAGCGCAGAAAGAAGGGCGGCTGCTGAGGAGGACGAGGAATC
ATCCTAAGCCAAGTCGGCAAGATGCTCGGAGAGCGGTGGAAGGCTCTGAG
CGACACTGACCGTCGCCCTTACGAGGAGAAGGCTGCCGCTGATAAGAAGC
GTTACGAAGACGAGAAGGCCAGCTACAACACCCCAACGCTCCCAAGCGTG
GTCTCTCTGCCTACATGTTCTTCGCCAACGACAACCGTGAGAAGGTTCGC
GAGGAGAACCCTGGCATCTCTTTCGATGCCCAAGGAGAAGACCACCCGCA
AGACCAAGCCCCGTGGCACTGAGCGCAGAAAGAAGGGCGGCTGCTGAGGA
GGACGAGGAATCATCCTAAGCCAAGTCGGCAAGATGCTCGGAGAGCGGTG
GAAGGCTCTGAGCGACACTGACCGTCGCCCTTACGAGGAGAAGGCTGCCG
CTGATAAGAAGCGTTACGAAGACGAGAAGGCCAGCTACAACACCCCAACG
CTCCCAAGCGTGGTCTCTCTGCCTACATGTTCTTCGCCAACGACAACCGT
GAGAAGGTTCGCGAGGAGAACCCTGGCATCTCTTTCGATGCCCAAGGAGA
AGACCACCCGCAAGACCAAGCCCCGTGGCACTGAGCGCAGAAAGAAGG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NHP6KJC3_006021Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006021-T1KJC3_006021-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006021-T1.cdsKJC3_006021-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006021-T1.exon4KJC3_006021-T1.exon4Aspergillus niger KJC3exon
KJC3_006021-T1.exon3KJC3_006021-T1.exon3Aspergillus niger KJC3exon
KJC3_006021-T1.exon2KJC3_006021-T1.exon2Aspergillus niger KJC3exon
KJC3_006021-T1.exon1KJC3_006021-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036910
DBxrefInterPro:IPR009071
DBxrefPFAM:PF09011
DBxrefPFAM:PF00505
ProductNon-histone chromosomal protein 6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4419113..4419582 -
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