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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4782845..4786987- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006132-T1 ID=KJC3_006132-T1|Name=KJC3_006132-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4143bp|location=Sequence derived from alignment at ch4:4782845..4786987- (Aspergillus niger KJC3)
CCTCCTCCCTCCATTCCCGTGACTACCCTAGGGACGGCTACCTTGGGTCT
TCCCTCTTGGAACAAATTTTCCTAAGCTTTTGTATTTTATTTTATTTTAT
TTTATCATTCTTTTTCATTTTCTTTTTTGCCCTCTTGCTCTTCTTCCCCC
CCTTACTTTTCCTCTTCCTTCGCCCTTGTCTCCGCATCTATACGCGTTGT
CCCTGGCAGTTGTGATCTTCCCATCAGAGCCATCCTGGTCAATCTCGCGC
GCATTGTTGACGCGAAGCAAAATTTGGCTAGCGAAATTTCCCTCTAGCAC
TGCTGATTGTGTTAGACCCACTTACACGCCGCCTCCCTGGTGGATCAGAA
CCATTGACTGTTTTGACAACGTGCGGATAGTGAGAAGTTCCCACACAACT
CAAGTTTCTGGTGGGTGACCGTGGGGAATTCAGATTAAGCATCTCGACCT
CTTTCCTGACCTCTTTTCTGCAGTGGAGTCGGACTTGATCCTGCACGTCT
ATCGTCGACCTTGAGGATCCTTGAGCGTCGATTTGCTTATCGAACCTACC
TCTTCCGCGAATCTCATCGTCAATTCTCCGCATCAGGTGGGAGGATTGTT
CATTCGTCGGAACAAGAAAAAGGAACCAGAAGTCACAATCGAAGAGAAGC
GAGCACACAACTCCGGGCAGGAGAATTTTGCGAGCGAACGCGATCAGGAT
TTGAACAAAGTGGCATTGGCAGTCTTTTCGCATCCACGGAGCACTGCCTT
GGTCGCAAGACACATCCTACGAAAAGGTTTTCTCGCCCTGCGATCAATGA
TCGAGATATCGTGAAATCTTCTTTCGCCAGTTCCTCACCCCAATTCTCTT
CTCTCCCCCTTCACCTCCCCTCCTCCCCGTGTTTGAAAGCCTCTCCGCGT
CACGATGGATCCCAGATCTCATCCTTCACGGCCCCCATCCACCAGCCTAC
CCCAGGGCTCCACGCCTCTGTCTTCGACACCTATCTCGAGCATGCCTATG
CCTCAGTACACCATGCAGCCTCAATACCCTGTGTCCCAGCCGCATACTCT
TCCCCCGCTGCAGCCTCATCACAGTCAATCCCCTGCCCCTCACTCCTACA
TGGGCCAGCCGTACCGGCCGGATCTGTCGAGGTATCCCGCATCTACTCAC
GATGTCTACGCGTCTTCCGCGGCTCCTATCATGCCTCACACCACCGTGGG
TAGTCTGCCTCCCTCGTCGTTCCTGTCCCATCCCAATCCGCAGGCACAAC
CCCAGCCGTCGCAACCTTACCCTCCGCCTCATAGCGTGCTGCCTCCCGCG
TCCAGCGCGCAGACCTATCCCCAGCCGATTGCGCCGGCGCCTCCGCGTGA
TCGTCGCTCGGATTTCTCCGGTCTTCCGTCAGGTGCTTTCAGCTACTCCG
ATAACAAGGGAACGCCTTGGATGAACCCCGACCCTGTTGCAAGTGCAAAC
GGTGCTCCCCCGTATGCTGCGAAGGAACCTCCCAGGACACAGGTTGTTGG
GTCGCAGGGCCGCCGCGGAATTTTGCCGAGCGTTCCGGGACGCGCGACTC
CCGTCACGAACGGTGTCAATGGTACCGCGAAGAACACTACCATTCCGGCC
AAGGATGCGGACGGAAAGTTCCCTTGCCCGCACTGTAACAAGACCTATCT
TCATGCGAAGCATCTGAAGCGCCATTTGCTCAGACGTGAGTGCCCCTCCT
TCCATCTGGATAATTCGGTAGCGCATGGCGGGGATTGAATCGTTCCGATG
ACTAATCTTTGTTTTCTTCGGTAGACACTGGAGACCGTCCGTACATGTGT
GTGCTCTGCAAGGATACCTTTTCTCGCAGTGATATTCTCAAGCGTCACTT
CCAGAAGTGCTCGTTGCGACGTGGTAACCCTACTGGGGCGACTCACCTGT
CGCACCCTCAGGCACACTTGAAGCGGTCTCAAGCTGCGCAGAATGCCGTT
AAGCCCGTTCAGGATGAAGTCAATACCACCGTCCCGCATCCCAACGGTAT
GCCGGGTGCTACGTATGGCGAGGCGCCCGTGAATGGCAATGGCATGGCTC
CCGGTCGCCCCGGATATCCGGAACAGCAGCCTTTGGGTTTCTCCATGCCT
TCCGTCAATGGGATGAACCGTGGTCAGCCCGAAGACGCGTTCCCGGGCGG
ACAGCCTCACCAGCGTGGACCCTGGCTTGCTGCTCCCAAGCAGAACCCGT
ACATGGTGCAGCCTGGCGCAGATGCAACTGGCCAGCAGCTGAATGTTGAT
CGTCCTCCTATTGAGCAGGTAAAGCCCCCGGTTGTTCAAGACCCTAAACG
TCCTGTCATGCCTGGACCTCCCAATCACGCTGGCGAAATTGACTGGACTT
CGATGTTTCAGCCCGGAGCGTCCGACGGTTACATCAATCCCGTCTTCCCC
CAGACCATGGCGTCCGGCCAGGAGCCTATCCACGCTCACGTCGATACCGA
ACGCAAGTTTTACCCCACCACCACCGCTGGTCCCCAGGAGGGTGGGATGA
ACGGTCTCTACCTGGCTTCGACCACGTTGAGTGGCGACGGTAAGTGAAGG
AGTCCTGGAACTCAATCCCGCTCTGCGTATGGATGACGGCATGCTGATCC
CCGAATCCCAGGTACCGTCCAGCCTGCTAGGCAATAGTGGTGACTTGGAA
GTGGATGTCTTGAGCTGACCACGTTGAGCTTGATGTGCATAACGTCAAGG
GAGACGAAGTACTGCGGCCTAAACGAACGGTTACAAAATTTGTCTTACTA
ACTGGGTTACGTTGTCAAACGATGTTATGCATAAGTCTAGCGATGTCTTG
CAATGCTAGGCATTTGTCTGGGAGTATGTATGGGGACGCTTCTCCGATCA
TGCTGTTGATGCTCTTGCACAAGCGTGTACATGCTATGCGGTTTGGCGCC
TTATCAGTCTCCTGGATTATGCGCATTGAATCCAGCCTGGAAAGCCTCAT
GAATGATTATTGAGGGTTGTCATAAGAGAAAAAAGAAAAAACTAAGAAAA
AAAAGGAACCGGAAAATGGAAGGAAAGAAAAAAATACAGATAGAAAAAAG
CTCGTTTCGGCCACCGACTCCGCGCAGCGCGCCACAGCGTTGGTCTAGAT
TACAGCATCCGGATTACTCAATTGTTATGAAAACGTCTTCTTTTGTCCTA
CTGGGTTATCTGGTCGTCCATGTTTTATTTGAAAAATCTTGTGAGCATTT
TCTACGGCGAGTGCAGATTTGCGGTGATTCTGGACCTGTTTTGTTTTGTT
TCCATCCATTATGAGTGGGTTGATGGGATGGTGTGTGTGGTTTTTAACTG
GCGTCCAATCATAGACTTGGGCATGTGTTTTGATTTCTGTTGCGTCAAGG
GCTCTCTCATCTTCAACGAGTCATCAAAAGATTTCTTTAGCAGGGAAGGC
TTCCGTCCACTCTTCGTTCCGCTTTGCATGTTCCCTTTACCTGTCCAAAT
TTGAGCTGCACGGAGGGTTGAGTGTGTTCGGGATTTATTTGCATAACCGT
TACGGCCGTTTCCTATCCGCATGTTGTCTTCCAGTCGACCATGTAAGTAC
ATACTGTGTGTCCGATGGGGGCATACGAGGTCGAGCTAGGATGAAAGGTG
TTGCATCGTCTTGTGTTTATCATTTGCCTCCTGCGTTCCCTATCCAATGT
GTTTCTGTGTCAGTGTGCTTCTGTTTCCTTCCGTGTCTCATGCTTTATTC
TTTTTCCGTTTTCTTTTCATTTTTCTCATTCGTGACTGAAAAAGGTAGCA
TGGTGCTTTTCGACTGCCCAATTTCCTACATTTTGCGGCTGGGTTGCCTG
CAGATCCTGGCCGCAGTCAGGGGCACTCCTGCTGTGTTGGAGCTTGTCTT
TTTTGTTACTCCGGACGGCGGTTGGTTGATCTGCCTGGATGCACACCCCT
GGTCAGCCCCCAGATGTTCCATACGTCGGTTATGTACTTGTTCTATCCAT
GATGCTGCATGTATTTTCTTCTTGTATCTGGTCCTGGAGTCTGGAGGCCA
GGGAAGCTGTTGAGCCCCCTGCATCAGGCCTGGTGGAAGTCGTCACTTAT
GGGAAGCCACGGGAATCCAAAAGCTAGAATATAGACAGCCAGTGATTCGG
AGTTGAACGAGAAATAATAAGGACCATATTTACTTGACTTACC back to topCoding sequence (CDS) from alignment at ch4:4782845..4786987- >KJC3_006132-T1 ID=KJC3_006132-T1|Name=KJC3_006132-T1|organism=Aspergillus niger KJC3|type=CDS|length=4716bp|location=Sequence derived from alignment at ch4:4782845..4786987- (Aspergillus niger KJC3)
GTACCGTCCAGCCTGCTAGGCAATAGACACTGGAGACCGTCCGTACATGT
GTGTGCTCTGCAAGGATACCTTTTCTCGCAGTGATATTCTCAAGCGTCAC
TTCCAGAAGTGCTCGTTGCGACGTGGTAACCCTACTGGGGCGACTCACCT
GTCGCACCCTCAGGCACACTTGAAGCGGTCTCAAGCTGCGCAGAATGCCG
TTAAGCCCGTTCAGGATGAAGTCAATACCACCGTCCCGCATCCCAACGGT
ATGCCGGGTGCTACGTATGGCGAGGCGCCCGTGAATGGCAATGGCATGGC
TCCCGGTCGCCCCGGATATCCGGAACAGCAGCCTTTGGGTTTCTCCATGC
CTTCCGTCAATGGGATGAACCGTGGTCAGCCCGAAGACGCGTTCCCGGGC
GGACAGCCTCACCAGCGTGGACCCTGGCTTGCTGCTCCCAAGCAGAACCC
GTACATGGTGCAGCCTGGCGCAGATGCAACTGGCCAGCAGCTGAATGTTG
ATCGTCCTCCTATTGAGCAGGTAAAGCCCCCGGTTGTTCAAGACCCTAAA
CGTCCTGTCATGCCTGGACCTCCCAATCACGCTGGCGAAATTGACTGGAC
TTCGATGTTTCAGCCCGGAGCGTCCGACGGTTACATCAATCCCGTCTTCC
CCCAGACCATGGCGTCCGGCCAGGAGCCTATCCACGCTCACGTCGATACC
GAACGCAAGTTTTACCCCACCACCACCGCTGGTCCCCAGGAGGGTGGGAT
GAACGGTCTCTACCTGGCTTCGACCACGTTGAGTGGCGACGATGGATCCC
AGATCTCATCCTTCACGGCCCCCATCCACCAGCCTACCCCAGGGCTCCAC
GCCTCTGTCTTCGACACCTATCTCGAGCATGCCTATGCCTCAGTACACCA
TGCAGCCTCAATACCCTGTGTCCCAGCCGCATACTCTTCCCCCGCTGCAG
CCTCATCACAGTCAATCCCCTGCCCCTCACTCCTACATGGGCCAGCCGTA
CCGGCCGGATCTGTCGAGGTATCCCGCATCTACTCACGATGTCTACGCGT
CTTCCGCGGCTCCTATCATGCCTCACACCACCGTGGGTAGTCTGCCTCCC
TCGTCGTTCCTGTCCCATCCCAATCCGCAGGCACAACCCCAGCCGTCGCA
ACCTTACCCTCCGCCTCATAGCGTGCTGCCTCCCGCGTCCAGCGCGCAGA
CCTATCCCCAGCCGATTGCGCCGGCGCCTCCGCGTGATCGTCGCTCGGAT
TTCTCCGGTCTTCCGTCAGGTGCTTTCAGCTACTCCGATAACAAGGGAAC
GCCTTGGATGAACCCCGACCCTGTTGCAAGTGCAAACGGTGCTCCCCCGT
ATGCTGCGAAGGAACCTCCCAGGACACAGGTTGTTGGGTCGCAGGGCCGC
CGCGGAATTTTGCCGAGCGTTCCGGGACGCGCGACTCCCGTCACGAACGG
TGTCAATGGTACCGCGAAGAACACTACCATTCCGGCCAAGGATGCGGACG
GAAAGTTCCCTTGCCCGCACTGTAACAAGACCTATCTTCATGCGAAGCAT
CTGAAGCGCCATTTGCTCAGACGTACCGTCCAGCCTGCTAGGCAATAGAC
ACTGGAGACCGTCCGTACATGTGTGTGCTCTGCAAGGATACCTTTTCTCG
CAGTGATATTCTCAAGCGTCACTTCCAGAAGTGCTCGTTGCGACGTGGTA
ACCCTACTGGGGCGACTCACCTGTCGCACCCTCAGGCACACTTGAAGCGG
TCTCAAGCTGCGCAGAATGCCGTTAAGCCCGTTCAGGATGAAGTCAATAC
CACCGTCCCGCATCCCAACGGTATGCCGGGTGCTACGTATGGCGAGGCGC
CCGTGAATGGCAATGGCATGGCTCCCGGTCGCCCCGGATATCCGGAACAG
CAGCCTTTGGGTTTCTCCATGCCTTCCGTCAATGGGATGAACCGTGGTCA
GCCCGAAGACGCGTTCCCGGGCGGACAGCCTCACCAGCGTGGACCCTGGC
TTGCTGCTCCCAAGCAGAACCCGTACATGGTGCAGCCTGGCGCAGATGCA
ACTGGCCAGCAGCTGAATGTTGATCGTCCTCCTATTGAGCAGGTAAAGCC
CCCGGTTGTTCAAGACCCTAAACGTCCTGTCATGCCTGGACCTCCCAATC
ACGCTGGCGAAATTGACTGGACTTCGATGTTTCAGCCCGGAGCGTCCGAC
GGTTACATCAATCCCGTCTTCCCCCAGACCATGGCGTCCGGCCAGGAGCC
TATCCACGCTCACGTCGATACCGAACGCAAGTTTTACCCCACCACCACCG
CTGGTCCCCAGGAGGGTGGGATGAACGGTCTCTACCTGGCTTCGACCACG
TTGAGTGGCGACGATGGATCCCAGATCTCATCCTTCACGGCCCCCATCCA
CCAGCCTACCCCAGGGCTCCACGCCTCTGTCTTCGACACCTATCTCGAGC
ATGCCTATGCCTCAGTACACCATGCAGCCTCAATACCCTGTGTCCCAGCC
GCATACTCTTCCCCCGCTGCAGCCTCATCACAGTCAATCCCCTGCCCCTC
ACTCCTACATGGGCCAGCCGTACCGGCCGGATCTGTCGAGGTATCCCGCA
TCTACTCACGATGTCTACGCGTCTTCCGCGGCTCCTATCATGCCTCACAC
CACCGTGGGTAGTCTGCCTCCCTCGTCGTTCCTGTCCCATCCCAATCCGC
AGGCACAACCCCAGCCGTCGCAACCTTACCCTCCGCCTCATAGCGTGCTG
CCTCCCGCGTCCAGCGCGCAGACCTATCCCCAGCCGATTGCGCCGGCGCC
TCCGCGTGATCGTCGCTCGGATTTCTCCGGTCTTCCGTCAGGTGCTTTCA
GCTACTCCGATAACAAGGGAACGCCTTGGATGAACCCCGACCCTGTTGCA
AGTGCAAACGGTGCTCCCCCGTATGCTGCGAAGGAACCTCCCAGGACACA
GGTTGTTGGGTCGCAGGGCCGCCGCGGAATTTTGCCGAGCGTTCCGGGAC
GCGCGACTCCCGTCACGAACGGTGTCAATGGTACCGCGAAGAACACTACC
ATTCCGGCCAAGGATGCGGACGGAAAGTTCCCTTGCCCGCACTGTAACAA
GACCTATCTTCATGCGAAGCATCTGAAGCGCCATTTGCTCAGACGTACCG
TCCAGCCTGCTAGGCAATAGACACTGGAGACCGTCCGTACATGTGTGTGC
TCTGCAAGGATACCTTTTCTCGCAGTGATATTCTCAAGCGTCACTTCCAG
AAGTGCTCGTTGCGACGTGGTAACCCTACTGGGGCGACTCACCTGTCGCA
CCCTCAGGCACACTTGAAGCGGTCTCAAGCTGCGCAGAATGCCGTTAAGC
CCGTTCAGGATGAAGTCAATACCACCGTCCCGCATCCCAACGGTATGCCG
GGTGCTACGTATGGCGAGGCGCCCGTGAATGGCAATGGCATGGCTCCCGG
TCGCCCCGGATATCCGGAACAGCAGCCTTTGGGTTTCTCCATGCCTTCCG
TCAATGGGATGAACCGTGGTCAGCCCGAAGACGCGTTCCCGGGCGGACAG
CCTCACCAGCGTGGACCCTGGCTTGCTGCTCCCAAGCAGAACCCGTACAT
GGTGCAGCCTGGCGCAGATGCAACTGGCCAGCAGCTGAATGTTGATCGTC
CTCCTATTGAGCAGGTAAAGCCCCCGGTTGTTCAAGACCCTAAACGTCCT
GTCATGCCTGGACCTCCCAATCACGCTGGCGAAATTGACTGGACTTCGAT
GTTTCAGCCCGGAGCGTCCGACGGTTACATCAATCCCGTCTTCCCCCAGA
CCATGGCGTCCGGCCAGGAGCCTATCCACGCTCACGTCGATACCGAACGC
AAGTTTTACCCCACCACCACCGCTGGTCCCCAGGAGGGTGGGATGAACGG
TCTCTACCTGGCTTCGACCACGTTGAGTGGCGACGATGGATCCCAGATCT
CATCCTTCACGGCCCCCATCCACCAGCCTACCCCAGGGCTCCACGCCTCT
GTCTTCGACACCTATCTCGAGCATGCCTATGCCTCAGTACACCATGCAGC
CTCAATACCCTGTGTCCCAGCCGCATACTCTTCCCCCGCTGCAGCCTCAT
CACAGTCAATCCCCTGCCCCTCACTCCTACATGGGCCAGCCGTACCGGCC
GGATCTGTCGAGGTATCCCGCATCTACTCACGATGTCTACGCGTCTTCCG
CGGCTCCTATCATGCCTCACACCACCGTGGGTAGTCTGCCTCCCTCGTCG
TTCCTGTCCCATCCCAATCCGCAGGCACAACCCCAGCCGTCGCAACCTTA
CCCTCCGCCTCATAGCGTGCTGCCTCCCGCGTCCAGCGCGCAGACCTATC
CCCAGCCGATTGCGCCGGCGCCTCCGCGTGATCGTCGCTCGGATTTCTCC
GGTCTTCCGTCAGGTGCTTTCAGCTACTCCGATAACAAGGGAACGCCTTG
GATGAACCCCGACCCTGTTGCAAGTGCAAACGGTGCTCCCCCGTATGCTG
CGAAGGAACCTCCCAGGACACAGGTTGTTGGGTCGCAGGGCCGCCGCGGA
ATTTTGCCGAGCGTTCCGGGACGCGCGACTCCCGTCACGAACGGTGTCAA
TGGTACCGCGAAGAACACTACCATTCCGGCCAAGGATGCGGACGGAAAGT
TCCCTTGCCCGCACTGTAACAAGACCTATCTTCATGCGAAGCATCTGAAG
CGCCATTTGCTCAGAC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006132-T1.utr3p1 | KJC3_006132-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4782845..4786987 - |
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