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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5161328..5162109+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006257-T1 ID=KJC3_006257-T1|Name=KJC3_006257-T1|organism=Aspergillus niger KJC3|type=mRNA|length=782bp|location=Sequence derived from alignment at ch4:5161328..5162109+ (Aspergillus niger KJC3)
CCCAGATCCCCCGACTTCTCCCAGAGACTTTGTGAACTACCTAACTATCT
TTGAGAAAACTTAAGTATCGTACATAGAAGATATCTACTCTGAATAATGT
CTGACACTAATCTCATGGATATCGAGCCTGGTGGTGAGAATACGCAGTAC
GTCTAGTCTATTATATCTTGTCTTTAGGGAATTCAAGTCATGCTAATGGT
TGTATATGAACAGGTATGAATCCATCCGGTTGTATACGGAGACCCCGAAG
AAACAGACTGGCCAGTTGGGTGGTAAGTGAACCTATTATTTGCCATGGAT
GTCCCAAGCATAGGAGCTAAGTTGCTCATAGGCCACTCCCAACATACCGT
CAGCGAGATGAGAACTACACTCGGCGACGACCGGAACGAAAACGAGGATC
AGTATCGGGATACGCCCCTGGCACGACAGCTGGAAAAGGGCGAGGCTACA
ACAGGTCTCACGGGGATCACGGATATAGGTAGGTACAGGTTTGGTTTTGA
TATTTCGTTTTTCCTAACTCCGCATATTCATGTGAAAAATACATCGACAC
CTGCGACAAGCGGGAAAGAAAATAAATGAAACATGACAGATAGAGAGTCT
AGAAGCTGATGATGATGATAATGTACACAAGACCTGAAGCCCGAAACCCC
AGAAGAGGGTGCTGCGCTGGCGGCGAAAATCAGGAGAGAACAAGGGTATG
GACCTGGTTCGGGCGTCGGGGCTTAGATGTCATGACGTTGTGATTGAACC
GGGGTGAATTGGCGTGATTGAGAGGTTTGGTT back to topCoding sequence (CDS) from alignment at ch4:5161328..5162109+ >KJC3_006257-T1 ID=KJC3_006257-T1|Name=KJC3_006257-T1|organism=Aspergillus niger KJC3|type=CDS|length=1404bp|location=Sequence derived from alignment at ch4:5161328..5162109+ (Aspergillus niger KJC3)
ATGTCTGACACTAATCTCATGGATATCGAGCCTGGTGGTGAGAATACGCA
GTATGAATCCATCCGGTTGTATACGGAGACCCCGAAGAAACAGACTGGCC
AGTTGGGTGGCCACTCCCAACATACCGTCAGCGAGATGAGAACTACACTC
GGCGACGACCGGAACGAAAACGAGGATCAGTATCGGGATACGCCCCTGGC
ACGACAGCTGGAAAAGGGCGAGGCTACAACAGGTCTCACGGGGATCACGG
ATATAGACCTGAAGCCCGAAACCCCAGAAGAGGGTGCTGCGCTGGCGGCG
AAAATCAGGAGAGAACAAGGGTATGGACCTGGTTCGGGCGTCGGGGCTTA
GATGTCTGACACTAATCTCATGGATATCGAGCCTGGTGGTGAGAATACGC
AGTATGAATCCATCCGGTTGTATACGGAGACCCCGAAGAAACAGACTGGC
CAGTTGGGTGGCCACTCCCAACATACCGTCAGCGAGATGAGAACTACACT
CGGCGACGACCGGAACGAAAACGAGGATCAGTATCGGGATACGCCCCTGG
CACGACAGCTGGAAAAGGGCGAGGCTACAACAGGTCTCACGGGGATCACG
GATATAGACCTGAAGCCCGAAACCCCAGAAGAGGGTGCTGCGCTGGCGGC
GAAAATCAGGAGAGAACAAGGGTATGGACCTGGTTCGGGCGTCGGGGCTT
AGATGTCTGACACTAATCTCATGGATATCGAGCCTGGTGGTGAGAATACG
CAGTATGAATCCATCCGGTTGTATACGGAGACCCCGAAGAAACAGACTGG
CCAGTTGGGTGGCCACTCCCAACATACCGTCAGCGAGATGAGAACTACAC
TCGGCGACGACCGGAACGAAAACGAGGATCAGTATCGGGATACGCCCCTG
GCACGACAGCTGGAAAAGGGCGAGGCTACAACAGGTCTCACGGGGATCAC
GGATATAGACCTGAAGCCCGAAACCCCAGAAGAGGGTGCTGCGCTGGCGG
CGAAAATCAGGAGAGAACAAGGGTATGGACCTGGTTCGGGCGTCGGGGCT
TAGATGTCTGACACTAATCTCATGGATATCGAGCCTGGTGGTGAGAATAC
GCAGTATGAATCCATCCGGTTGTATACGGAGACCCCGAAGAAACAGACTG
GCCAGTTGGGTGGCCACTCCCAACATACCGTCAGCGAGATGAGAACTACA
CTCGGCGACGACCGGAACGAAAACGAGGATCAGTATCGGGATACGCCCCT
GGCACGACAGCTGGAAAAGGGCGAGGCTACAACAGGTCTCACGGGGATCA
CGGATATAGACCTGAAGCCCGAAACCCCAGAAGAGGGTGCTGCGCTGGCG
GCGAAAATCAGGAGAGAACAAGGGTATGGACCTGGTTCGGGCGTCGGGGC
TTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006257-T1.utr5p1 | KJC3_006257-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006257-T1.utr3p1 | KJC3_006257-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5161328..5162109 + |
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