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KJC3_006430-T1, KJC3_006430-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006430-T1
Unique NameKJC3_006430-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5683374..5684666-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006430-T1 ID=KJC3_006430-T1|Name=KJC3_006430-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1293bp|location=Sequence derived from alignment at ch4:5683374..5684666- (Aspergillus niger KJC3)
GGGCCACTCTCTATTATTAACCCAACCCGAGCCCTACTTTCATAGACACG
GATCTGAACTGGATGATATAAAGACGAATAGATCTTACTATGCATACAGC
TACCAAGCATCACTTTCGAAAACTAACCATAACACTGTCATGGCAAAACT
CGAACCTTTTAGCGGCGACTACTATCTATGGGACTATGTCCCTTCCATAG
CCGCCTCGATCATCTTCTTCCTCATCTACCTCGCTCTGACTCTATTCCAT
GTCTGGAAGGCCTGGATAACCCGCGCACGCTTCTGCATCCCCTTCATCAT
CGGTGGATTCTGTACGTCCTTCCTCTTTTTACCTGTCCCTGCCATCTCGT
TCACCATGACCCCTAACCATATGCAATCCACGCAGTTGAAGTAATCGGCT
TCGCCGTCCGCGCCGCGTGCACCAACGCAACCGCCAACCTAATCCTCTAC
ATCCTGCAAAGCGTCTTCATCCTAATCGGCCCCGTTCTCTTCTCCGCAAG
CGTATACATGGTCCTAGGCCGTCTGATTCGCAGCGTCAACGCAGAAAAGT
ACTCCCTCATCCGCATCACCCGAGTAACCAAAGTCTTCGTCACCGGCGAC
ATCCTCTCATTCCTAGTACAGGGCCAAGGCTCAGGGTTAATGGCCACGGA
CGGCCTAGAGAACATAGCAAAAGCCATCGTGATCATTGGATTGATGATCC
AGATCATCATGTTTGGATTCTTCATCGTCGTGGCTACGGTCTTTGAGAAG
AGGATGAAGCGCGCGCCGACGAGTCAGGCGCCGTACACGCATCATCTGTA
CCCTTTGTATGCGGTTAGTTGGCTGATTATGCTCCGCTCTATCTTTCGGG
TTTTTGAGTATGCGTTGGGGCAGAAGGGCTATCTTTTGGCGCATGAGTGG
CCGCTTTTTGTGTTTGATGCGGTGCCGATGTCTGCTGTGATGGTTGTCTG
GGGGTATTGGCATCCTGGGACGTTGAAGGCAGAGGGGGGTCTGGGGGCGC
AGCAGGAGGTGGGGATGGGCTGGTATCGGAGTATGGCATAGCTTTACTTA
CCTTTTAGGTATCGTTGCATGCGTTGAGCCATCACAGTTCTTTTTTTTTT
CGCTTTGTGTTTTGAAGATGCCGTTGTCAGGATGAATCTATCGTGGAGTT
ATTGTCAGAGATTATGGCATGTCCGTATATAGAGCAAGCTTAAGAGCCTC
GCTATTGCATGCACTTGAGAAATACAAAAAATTCATGTAGGGTCAAGTAT
ATTCTTTACGCTAAGTTGTTTGGCCCTAGTTATTGTAGTAGGT
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Coding sequence (CDS) from alignment at ch4:5683374..5684666-

>KJC3_006430-T1 ID=KJC3_006430-T1|Name=KJC3_006430-T1|organism=Aspergillus niger KJC3|type=CDS|length=1656bp|location=Sequence derived from alignment at ch4:5683374..5684666- (Aspergillus niger KJC3)
TTGAAGTAATCGGCTTCGCCGTCCGCGCCGCGTGCACCAACGCAACCGCC
AACCTAATCCTCTACATCCTGCAAAGCGTCTTCATCCTAATCGGCCCCGT
TCTCTTCTCCGCAAGCGTATACATGGTCCTAGGCCGTCTGATTCGCAGCG
TCAACGCAGAAAAGTACTCCCTCATCCGCATCACCCGAGTAACCAAAGTC
TTCGTCACCGGCGACATCCTCTCATTCCTAGTACAGGGCCAAGGCTCAGG
GTTAATGGCCACGGACGGCCTAGAGAACATAGCAAAAGCCATCGTGATCA
TTGGATTGATGATCCAGATCATCATGTTTGGATTCTTCATCGTCGTGGCT
ACGGTCTTTGAGAAGAGGATGAAGCGCGCGCCGACGAGTCAGGCGCCGTA
CACGCATCATCTGTACCCTTTGTATGCGGTTAGTTGGCTGATTATGCTCC
GCTCTATCTTTCGGGTTTTTGAGTATGCGTTGGGGCAGAAGGGCTATCTT
TTGGCGCATGAGTGGCCGCTTTTTGTGTTTGATGCGGTGCCGATGTCTGC
TGTGATGGTTGTCTGGGGGTATTGGCATCCTGGGACGTTGAAGGCAGAGG
GGGGTCTGGGGGCGCAGCAGGAGGTGGGGATGGGCTGGTATCGGAGTATG
GCATAGATGGCAAAACTCGAACCTTTTAGCGGCGACTACTATCTATGGGA
CTATGTCCCTTCCATAGCCGCCTCGATCATCTTCTTCCTCATCTACCTCG
CTCTGACTCTATTCCATGTCTGGAAGGCCTGGATAACCCGCGCACGCTTC
TGCATCCCCTTCATCATCGGTGGATTCTTTGAAGTAATCGGCTTCGCCGT
CCGCGCCGCGTGCACCAACGCAACCGCCAACCTAATCCTCTACATCCTGC
AAAGCGTCTTCATCCTAATCGGCCCCGTTCTCTTCTCCGCAAGCGTATAC
ATGGTCCTAGGCCGTCTGATTCGCAGCGTCAACGCAGAAAAGTACTCCCT
CATCCGCATCACCCGAGTAACCAAAGTCTTCGTCACCGGCGACATCCTCT
CATTCCTAGTACAGGGCCAAGGCTCAGGGTTAATGGCCACGGACGGCCTA
GAGAACATAGCAAAAGCCATCGTGATCATTGGATTGATGATCCAGATCAT
CATGTTTGGATTCTTCATCGTCGTGGCTACGGTCTTTGAGAAGAGGATGA
AGCGCGCGCCGACGAGTCAGGCGCCGTACACGCATCATCTGTACCCTTTG
TATGCGGTTAGTTGGCTGATTATGCTCCGCTCTATCTTTCGGGTTTTTGA
GTATGCGTTGGGGCAGAAGGGCTATCTTTTGGCGCATGAGTGGCCGCTTT
TTGTGTTTGATGCGGTGCCGATGTCTGCTGTGATGGTTGTCTGGGGGTAT
TGGCATCCTGGGACGTTGAAGGCAGAGGGGGGTCTGGGGGCGCAGCAGGA
GGTGGGGATGGGCTGGTATCGGAGTATGGCATAGATGGCAAAACTCGAAC
CTTTTAGCGGCGACTACTATCTATGGGACTATGTCCCTTCCATAGCCGCC
TCGATCATCTTCTTCCTCATCTACCTCGCTCTGACTCTATTCCATGTCTG
GAAGGCCTGGATAACCCGCGCACGCTTCTGCATCCCCTTCATCATCGGTG
GATTCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006430KJC3_006430Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006430-T1KJC3_006430-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006430-T1.cdsKJC3_006430-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006430-T1.utr3p1KJC3_006430-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006430-T1.exon2KJC3_006430-T1.exon2Aspergillus niger KJC3exon
KJC3_006430-T1.exon1KJC3_006430-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006430-T1.utr5p1KJC3_006430-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007568
DBxrefPFAM:PF04479
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5683374..5684666 -
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