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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5761275..5762320- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006456-T1 ID=KJC3_006456-T1|Name=KJC3_006456-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1046bp|location=Sequence derived from alignment at ch4:5761275..5762320- (Aspergillus niger KJC3)
ATGACACCCCTCGACCGCCCTCTGGCCCGCCCATGGTATGAAGACTATTC
GGAGGAAGAGATTGAACGCGATGAAAACGATGAAATAATTATACCCCGGC
ACAGAGTCCTTGACTTGTATGAGCTCCTCGGTGTCGATGACAAAGCGACT
CAAGACCAAATCAGAGCTGCCTATAAGAAGAAGGCGCTGAAGCATCATCC
TGGTGCGTATATACTTCACTTTACTCTTATCTATCTATCACTGCTGTGGA
ATGTACAGTCTAACCACCAGCACCAGACAAGGCACCCCCGAGCAAAAAAG
AAGAAGCAAACACCAAATTCCAACAGATCGCCTATGCCTACGCCGTCCTT
TCCGATGAACGTCGCCGCGAGATATTCGATCGCACCGGTAGCACGGAGGA
AGCCTTGCAAGAAGATGATGGATTCGACTGGATGGAGTTCTACCGGGAGC
AGTTCGCGACCGCCATCGACGTCGATGCGATCGACAAGCTCAAGCAGGAA
TATCAGGGGTCCGAGGAAGAGGTCAACGATATACTCCAGGCCTATGAACT
TCACCGGGGCGATATGGATAGAATCTACGAGTCGGTGATGCTGTGTAATG
TCATTGATGATGATGAGCGATTCCGTGCCATCATTGACTCGGCTATTGCG
GATGGAAGGGCTCAGGAGTACAAGAAATACACAGAGGAGCCGGTCAAGAA
GCGTCAAGCCAGATTGAAGCGGGCACTGAAGGAAGCGAAGGAGGCGGAAC
AATTGGGCAAGGAGATCGAGGAGAACAAGTCTAAGACGGGTAGGAAGAAC
CAAGGGGGGAGGAAGAAGAAGGGTGGCCCCGAGGACGTGGGTGACTTGGC
TGCGATGATTAAACAACGAAACCTCTCCCGTCTTGACGTCCTCTGCCATC
AACTGGAGGAGAAGTATGACGTGGACAGTAAGCTTAATCCTCTGGAGCCG
AGGAGGAAGCGGAGGTCGAGTCCTCCTGAGGAGGCCTTCAAGGCTATGGC
TGCGCGTGGGGAGAAAAAGAAGAAGCAGAAGAGGACCAAGGGGTGA back to topCoding sequence (CDS) from alignment at ch4:5761275..5762320- >KJC3_006456-T1 ID=KJC3_006456-T1|Name=KJC3_006456-T1|organism=Aspergillus niger KJC3|type=CDS|length=1944bp|location=Sequence derived from alignment at ch4:5761275..5762320- (Aspergillus niger KJC3)
ACAAGGCACCCCCGAGCAAAAAAGAAGAAGCAAACACCAAATTCCAACAG
ATCGCCTATGCCTACGCCGTCCTTTCCGATGAACGTCGCCGCGAGATATT
CGATCGCACCGGTAGCACGGAGGAAGCCTTGCAAGAAGATGATGGATTCG
ACTGGATGGAGTTCTACCGGGAGCAGTTCGCGACCGCCATCGACGTCGAT
GCGATCGACAAGCTCAAGCAGGAATATCAGGGGTCCGAGGAAGAGGTCAA
CGATATACTCCAGGCCTATGAACTTCACCGGGGCGATATGGATAGAATCT
ACGAGTCGGTGATGCTGTGTAATGTCATTGATGATGATGAGCGATTCCGT
GCCATCATTGACTCGGCTATTGCGGATGGAAGGGCTCAGGAGTACAAGAA
ATACACAGAGGAGCCGGTCAAGAAGCGTCAAGCCAGATTGAAGCGGGCAC
TGAAGGAAGCGAAGGAGGCGGAACAATTGGGCAAGGAGATCGAGGAGAAC
AAGTCTAAGACGGGTAGGAAGAACCAAGGGGGGAGGAAGAAGAAGGGTGG
CCCCGAGGACGTGGGTGACTTGGCTGCGATGATTAAACAACGAAACCTCT
CCCGTCTTGACGTCCTCTGCCATCAACTGGAGGAGAAGTATGACGTGGAC
AGTAAGCTTAATCCTCTGGAGCCGAGGAGGAAGCGGAGGTCGAGTCCTCC
TGAGGAGGCCTTCAAGGCTATGGCTGCGCGTGGGGAGAAAAAGAAGAAGC
AGAAGAGGACCAAGGGGTGAATGACACCCCTCGACCGCCCTCTGGCCCGC
CCATGGTATGAAGACTATTCGGAGGAAGAGATTGAACGCGATGAAAACGA
TGAAATAATTATACCCCGGCACAGAGTCCTTGACTTGTATGAGCTCCTCG
GTGTCGATGACAAAGCGACTCAAGACCAAATCAGAGCTGCCTATAAGAAG
AAGGCGCTGAAGCATCATCCTGACAAGGCACCCCCGAGCAAAAAAGAAGA
AGCAAACACCAAATTCCAACAGATCGCCTATGCCTACGCCGTCCTTTCCG
ATGAACGTCGCCGCGAGATATTCGATCGCACCGGTAGCACGGAGGAAGCC
TTGCAAGAAGATGATGGATTCGACTGGATGGAGTTCTACCGGGAGCAGTT
CGCGACCGCCATCGACGTCGATGCGATCGACAAGCTCAAGCAGGAATATC
AGGGGTCCGAGGAAGAGGTCAACGATATACTCCAGGCCTATGAACTTCAC
CGGGGCGATATGGATAGAATCTACGAGTCGGTGATGCTGTGTAATGTCAT
TGATGATGATGAGCGATTCCGTGCCATCATTGACTCGGCTATTGCGGATG
GAAGGGCTCAGGAGTACAAGAAATACACAGAGGAGCCGGTCAAGAAGCGT
CAAGCCAGATTGAAGCGGGCACTGAAGGAAGCGAAGGAGGCGGAACAATT
GGGCAAGGAGATCGAGGAGAACAAGTCTAAGACGGGTAGGAAGAACCAAG
GGGGGAGGAAGAAGAAGGGTGGCCCCGAGGACGTGGGTGACTTGGCTGCG
ATGATTAAACAACGAAACCTCTCCCGTCTTGACGTCCTCTGCCATCAACT
GGAGGAGAAGTATGACGTGGACAGTAAGCTTAATCCTCTGGAGCCGAGGA
GGAAGCGGAGGTCGAGTCCTCCTGAGGAGGCCTTCAAGGCTATGGCTGCG
CGTGGGGAGAAAAAGAAGAAGCAGAAGAGGACCAAGGGGTGAATGACACC
CCTCGACCGCCCTCTGGCCCGCCCATGGTATGAAGACTATTCGGAGGAAG
AGATTGAACGCGATGAAAACGATGAAATAATTATACCCCGGCACAGAGTC
CTTGACTTGTATGAGCTCCTCGGTGTCGATGACAAAGCGACTCAAGACCA
AATCAGAGCTGCCTATAAGAAGAAGGCGCTGAAGCATCATCCTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018253 |
| DBxref | InterPro:IPR036869 |
| DBxref | InterPro:IPR001623 |
| DBxref | PFAM:PF00226 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5761275..5762320 - |
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