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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:173268..174457- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006711-T1 ID=KJC3_006711-T1|Name=KJC3_006711-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1190bp|location=Sequence derived from alignment at ch5:173268..174457- (Aspergillus niger KJC3)
ATGAAGACTCATCGTATATCAGACCTTTTCATTGGGATCATTTTCCTTTT
CTCCGGGGCGGCTAACAGCCTTGCCCCTCGTTGGCCGAGTCCTGATTACA
ACAACTTGACTGTCGCTTTAGTTCGAGCACCTCCCGTCAATTGGCCCCTG
CCCTTGATGAACAAGAATTGGACGGATGTTGAATTCGACTTGGACGGCTC
CGTCGAGAAAGGCGTTGGTTTGATCAAGCAGGCCGCTGACAATGGTGCCA
ATCTTATTGTTTTTCCTGAGCTATGGTTTCCTGGGTAAGTACTTCCCTTT
GAGTGATAATAAAGGGGATAAATATATTGATGTGCATGATGCCAATCTTA
GATACCCTAAAGGAATTGCAGATAATGTCTCAATCGCTAACCACCTCAAA
AACTACTACGATAACTCTCTAGTTGAAGGAAGTTCACAGTGGAATAAGCT
TCTTTTAGCTGCGAAAGAGAACCATATCTACGTTGTTCCCGCGTTCTCTC
ACCGTCAGGGTGATTACATCTACATGGCACAGGCGTTGATTTCTCCTGCT
GGTGAGACAATTCTACTTCGTCATAAGCTTAGGCCATCTGGTGGGGAGCG
AGAGATCTGGTCTGACGGCACCATTGAGGAACTGAAGGTGGTCGCAACCC
CTTACGGTCGTTGGGGGTTGCTAGAATGCTGGGAGCATTTCCATCCTGCT
ATGACATATAATGTTCAGTCGCAAGTTGAGAATTTGCATATCGCCTCATT
CCCATGTTAGTTTTCAACCCGATTCTAAAATTACCCGGGACTAATTATGG
TTAGACATGCCGGACAGTGGGAACTCCGAAGCAGCATATTGGGAGTCCCT
TGATGTCAACGTGGCAGCTACCCGAACTTACGCTGTCAACTCACAAGCTC
CAGTAGCTATGGCTGCGGTGGGAAACGTGCGTTTCATTGATGGATTTGGT
ATTGACTTAGAGGTAATAGAAGCCTCTGCGTCATTTGATAAAGTCCCATT
GGTGTACACATCTTTTAATACTACGGGACTCGGAAGTACCGTTCCGTATG
ACACTGATGGAGAGCAGTCGTGGGGAATCCTGCAGCAGATCAATGCTGGT
TTCCCCAGCTACATTCCCAAAGTGATTGGAAGCTATGTACAGCATCATAT
AGTGTCTATTTCCGCTCTTCTTTCGAGTTCCAAGCAATAA back to topCoding sequence (CDS) from alignment at ch5:173268..174457- >KJC3_006711-T1 ID=KJC3_006711-T1|Name=KJC3_006711-T1|organism=Aspergillus niger KJC3|type=CDS|length=3222bp|location=Sequence derived from alignment at ch5:173268..174457- (Aspergillus niger KJC3)
ACATGCCGGACAGTGGGAACTCCGAAGCAGCATATTGGGAGTCCCTTGAT
GTCAACGTGGCAGCTACCCGAACTTACGCTGTCAACTCACAAGCTCCAGT
AGCTATGGCTGCGGTGGGAAACGTGCGTTTCATTGATGGATTTGGTATTG
ACTTAGAGGTAATAGAAGCCTCTGCGTCATTTGATAAAGTCCCATTGGTG
TACACATCTTTTAATACTACGGGACTCGGAAGTACCGTTCCGTATGACAC
TGATGGAGAGCAGTCGTGGGGAATCCTGCAGCAGATCAATGCTGGTTTCC
CCAGCTACATTCCCAAAGTGATTGGAAGCTATGTACAGCATCATATAGTG
TCTATTTCCGCTCTTCTTTCGAGTTCCAAGCAATAAATACCCTAAAGGAA
TTGCAGATAATGTCTCAATCGCTAACCACCTCAAAAACTACTACGATAAC
TCTCTAGTTGAAGGAAGTTCACAGTGGAATAAGCTTCTTTTAGCTGCGAA
AGAGAACCATATCTACGTTGTTCCCGCGTTCTCTCACCGTCAGGGTGATT
ACATCTACATGGCACAGGCGTTGATTTCTCCTGCTGGTGAGACAATTCTA
CTTCGTCATAAGCTTAGGCCATCTGGTGGGGAGCGAGAGATCTGGTCTGA
CGGCACCATTGAGGAACTGAAGGTGGTCGCAACCCCTTACGGTCGTTGGG
GGTTGCTAGAATGCTGGGAGCATTTCCATCCTGCTATGACATATAATGTT
CAGTCGCAAGTTGAGAATTTGCATATCGCCTCATTCCCATATGAAGACTC
ATCGTATATCAGACCTTTTCATTGGGATCATTTTCCTTTTCTCCGGGGCG
GCTAACAGCCTTGCCCCTCGTTGGCCGAGTCCTGATTACAACAACTTGAC
TGTCGCTTTAGTTCGAGCACCTCCCGTCAATTGGCCCCTGCCCTTGATGA
ACAAGAATTGGACGGATGTTGAATTCGACTTGGACGGCTCCGTCGAGAAA
GGCGTTGGTTTGATCAAGCAGGCCGCTGACAATGGTGCCAATCTTATTGT
TTTTCCTGAGCTATGGTTTCCTGGACATGCCGGACAGTGGGAACTCCGAA
GCAGCATATTGGGAGTCCCTTGATGTCAACGTGGCAGCTACCCGAACTTA
CGCTGTCAACTCACAAGCTCCAGTAGCTATGGCTGCGGTGGGAAACGTGC
GTTTCATTGATGGATTTGGTATTGACTTAGAGGTAATAGAAGCCTCTGCG
TCATTTGATAAAGTCCCATTGGTGTACACATCTTTTAATACTACGGGACT
CGGAAGTACCGTTCCGTATGACACTGATGGAGAGCAGTCGTGGGGAATCC
TGCAGCAGATCAATGCTGGTTTCCCCAGCTACATTCCCAAAGTGATTGGA
AGCTATGTACAGCATCATATAGTGTCTATTTCCGCTCTTCTTTCGAGTTC
CAAGCAATAAATACCCTAAAGGAATTGCAGATAATGTCTCAATCGCTAAC
CACCTCAAAAACTACTACGATAACTCTCTAGTTGAAGGAAGTTCACAGTG
GAATAAGCTTCTTTTAGCTGCGAAAGAGAACCATATCTACGTTGTTCCCG
CGTTCTCTCACCGTCAGGGTGATTACATCTACATGGCACAGGCGTTGATT
TCTCCTGCTGGTGAGACAATTCTACTTCGTCATAAGCTTAGGCCATCTGG
TGGGGAGCGAGAGATCTGGTCTGACGGCACCATTGAGGAACTGAAGGTGG
TCGCAACCCCTTACGGTCGTTGGGGGTTGCTAGAATGCTGGGAGCATTTC
CATCCTGCTATGACATATAATGTTCAGTCGCAAGTTGAGAATTTGCATAT
CGCCTCATTCCCATATGAAGACTCATCGTATATCAGACCTTTTCATTGGG
ATCATTTTCCTTTTCTCCGGGGCGGCTAACAGCCTTGCCCCTCGTTGGCC
GAGTCCTGATTACAACAACTTGACTGTCGCTTTAGTTCGAGCACCTCCCG
TCAATTGGCCCCTGCCCTTGATGAACAAGAATTGGACGGATGTTGAATTC
GACTTGGACGGCTCCGTCGAGAAAGGCGTTGGTTTGATCAAGCAGGCCGC
TGACAATGGTGCCAATCTTATTGTTTTTCCTGAGCTATGGTTTCCTGGAC
ATGCCGGACAGTGGGAACTCCGAAGCAGCATATTGGGAGTCCCTTGATGT
CAACGTGGCAGCTACCCGAACTTACGCTGTCAACTCACAAGCTCCAGTAG
CTATGGCTGCGGTGGGAAACGTGCGTTTCATTGATGGATTTGGTATTGAC
TTAGAGGTAATAGAAGCCTCTGCGTCATTTGATAAAGTCCCATTGGTGTA
CACATCTTTTAATACTACGGGACTCGGAAGTACCGTTCCGTATGACACTG
ATGGAGAGCAGTCGTGGGGAATCCTGCAGCAGATCAATGCTGGTTTCCCC
AGCTACATTCCCAAAGTGATTGGAAGCTATGTACAGCATCATATAGTGTC
TATTTCCGCTCTTCTTTCGAGTTCCAAGCAATAAATACCCTAAAGGAATT
GCAGATAATGTCTCAATCGCTAACCACCTCAAAAACTACTACGATAACTC
TCTAGTTGAAGGAAGTTCACAGTGGAATAAGCTTCTTTTAGCTGCGAAAG
AGAACCATATCTACGTTGTTCCCGCGTTCTCTCACCGTCAGGGTGATTAC
ATCTACATGGCACAGGCGTTGATTTCTCCTGCTGGTGAGACAATTCTACT
TCGTCATAAGCTTAGGCCATCTGGTGGGGAGCGAGAGATCTGGTCTGACG
GCACCATTGAGGAACTGAAGGTGGTCGCAACCCCTTACGGTCGTTGGGGG
TTGCTAGAATGCTGGGAGCATTTCCATCCTGCTATGACATATAATGTTCA
GTCGCAAGTTGAGAATTTGCATATCGCCTCATTCCCATATGAAGACTCAT
CGTATATCAGACCTTTTCATTGGGATCATTTTCCTTTTCTCCGGGGCGGC
TAACAGCCTTGCCCCTCGTTGGCCGAGTCCTGATTACAACAACTTGACTG
TCGCTTTAGTTCGAGCACCTCCCGTCAATTGGCCCCTGCCCTTGATGAAC
AAGAATTGGACGGATGTTGAATTCGACTTGGACGGCTCCGTCGAGAAAGG
CGTTGGTTTGATCAAGCAGGCCGCTGACAATGGTGCCAATCTTATTGTTT
TTCCTGAGCTATGGTTTCCTGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006807 | nitrogen compound metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-23) |
| DBxref | InterPro:IPR036526 |
| DBxref | InterPro:IPR003010 |
| DBxref | PFAM:PF00795 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:173268..174457 - |
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