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KJC3_006738-T1, KJC3_006738-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006738-T1
Unique NameKJC3_006738-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:242666..245315-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006738-T1 ID=KJC3_006738-T1|Name=KJC3_006738-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2650bp|location=Sequence derived from alignment at ch5:242666..245315- (Aspergillus niger KJC3)
TTAGCTACCACACGGACTGACCCACACCTTCCTGTCTCAACCTCGGTAAG
CTCTTCCTTCCTTCTCATCCAGTCCCTTTGATCTATCCGTCCCCTCAATA
TAGTATTCACCACTCCCTAATGGATCTAATGGACTAACTTGCCTCTAAGA
GTGCCGAGCCGGACCGCAACGGTTGTGATGAGATGATCCAGCGTGCCCAC
CGCGGGCCAGGATACCGTTCAGTCAGTGACAGCTTCGTTCCACCAGCCTA
TAACATCCCGAATCGGCCGTGGTCTCGGAGGTCGGGTGGAGCAGCAGACG
CTGGCCTGGCGCCGTTGATGTTCGGTCTCTGCCTCAACAGTCGCCAGACG
AGGTTTAGTCTTGTAAGTGGAGAGACTTGCAGCAAATCTCTTTTCGTGAT
TTTTTATTTTTTTTATTTTTTATTTTTATTTTTAAATTTTCTTCTAATTC
TTTTTCTCTCTAGAGGGAAAGAAAAAACTTTTTTTGGGTCTTGGTTCCTG
CCAACTTTTTTCGCCGCGGCGAGTCTCCATACCACCATGGCATACTTACC
TCCGAACAGTCTCCATATCCGGCCGAACATGTCCTCCTGCTGGCCTCTAC
AAACTACGGAGCCTGGCCGGTGCACCGGGGTGATTGGTGTATATATACAA
ACCCCAATTCCCCTAATCTTGCCCCCCCTTGGATTTTAGTAGTCAAGATT
CGCCTCCGAAGGATTTTTTTCATTAGAGTGTTCTTATATTTTTCTTACTT
TATTTTTATTCTAAGCGAATTCCCTCTGGTTTGGGTAGCTACGCACACGA
CACGCACTCTCTTTATGGCAGCACCCCTCCACGACCTTCGATCATATCTC
ATGAATAGAAGTCTTCATCGCTGTCATACCGGTTGAACACCCCTTTCAAA
AGCCGCAACCATGATGGACCTTGGATATGAGGCGACTCCGCCACCTTCCG
CCGGGAAGGATTGGGTCAGCTTCTGGAATTTTGTGGACCGAGCTCCCCCT
CTCGAAGCCGAATCGGTCCCCCGCGATATTTTGGTCGTGGGTGCCGGCAT
TGCAGGCATTGCCGTTGCCCTGGCCCTCTCAAAGGAATTGACGCCCTTTG
TCCCCGATCTCCGGATCACCGTCTATGAGCGACACGATATCCTGTCTACA
TCCGGCGGTGCCATCAACCTCACTCCCGTTGCTCAGCGCCATCTTGATCG
CTTGGGTGTCCTTGACGAGCTGGACAAGCTGGGACCGGAATCTGGCACCG
ATGTAGATGCTATCGAGCTGTTCTCCAGTCGCTCGGGACGCTCCCTCGGC
GCCATAAACTTTACAGATGACAAGGGAAACGGCTTTGGTGGGTACAAGGG
CCGCCGTGTGATGCGTATCATCCTGTCCCTGGCCATGTTGAAGGTAGTCG
AGCGCACTAAGAATGTCAATGTGGTGTTTGGCAAGAAGCTGGTCCGCGGC
AAGGAGACAAAAGACAAGGCCGTCCTGTACTTCCAGGATGGTACAACGGC
CACCGGAGACCTGGTTCTCGGCTGCGATGGGGTCCACTCCAACGTCCGCA
CCCACTGGGTCTCTCCCGAGCACCCGTCCGAGTACACGGGCATCTCATTC
GTCCAGACCATGATCGATAGCAAAGACATCAAGGCTCCCGTCCATTTCCG
CTCCACCTCGATGAACATTTCCCGTCATGGCTCTTTGCTTGCCAGTTATT
GTGATCGAGATCATACTCAAATCTTTGTTGCTGCTATCGTGCAGTTCCGG
GAGGAGCTCCTATCGCATTACAAGATTGAGCCGGGTCAGGATTGGCGGCG
CACCGCGGCTATTAAAGATGCGCTTTGCCAAGAGATGCGCGACCGCTTCG
GCCGGTCGGGCCTCCCGGCCATCCGGGACATGGTCAACAAGGCCGACGAC
TGGATGCTCTATCCTGTGTGGCAGGTTCGCCCTGGTGCACGCTGGTTTCG
CAACCGAGTCATCCTCCTCGGTGACGCGGCACATGCAGTAAGTGTTTATC
CTTCTGATGCTTTCGATTCGATTACTGACAGTAATAGATGCCGCCGCGTG
ATGAATCTGCCGCGTACGCGCTAGACGACGCCATTCTCTTCTCGCGCATC
CTAGCGAAGCACCGCTACGATCCTCTCCCTGTTGCGTTCAAGGCTTACGA
GGATCTGCGGCGGGGAACGGTAAACGCTGCCTTCCAGGTATCGCGGCGGA
TGTGGGAGAAGAACCGTGACCTAGGCTTTTTGGAGGGCCGCCTCAAGGAG
TGGACCATGCCCATGCAAGTCCGCAACGGCAAGGAAGCTCGCGAACAGGC
GTGGGGTTTCGATGCGACCAAGGTGCAGCTCCCCGGACTGGGAGATTCAA
CCTCGTCGCTGTATTCATCTGAAAAGGAGTTCCTATAGAGGGTTTGCATG
GGTGGTGTTCCGGTTGGCGGGCTTGGGTAATTGGGTTCTCACGAGCTATG
ATATCATCTATACAGTTTTACTACACAGCAGGCATAAAGCCGTGGCTGTC
TGATTCTTGGCATTTCGGTTCTTGGTTCGGCATCATATAAATCAGACATA
TTGTCGTTGAATTCATCATCCTTATTTCGGTTGCGCGGCGTACCGAGTTT
TGATCCGAGGTACGACGGGGGAGTCTATGCCGAGAAGGGAAGTCTTCCGG
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Coding sequence (CDS) from alignment at ch5:242666..245315-

>KJC3_006738-T1 ID=KJC3_006738-T1|Name=KJC3_006738-T1|organism=Aspergillus niger KJC3|type=CDS|length=2856bp|location=Sequence derived from alignment at ch5:242666..245315- (Aspergillus niger KJC3)
ATGCCGCCGCGTGATGAATCTGCCGCGTACGCGCTAGACGACGCCATTCT
CTTCTCGCGCATCCTAGCGAAGCACCGCTACGATCCTCTCCCTGTTGCGT
TCAAGGCTTACGAGGATCTGCGGCGGGGAACGGTAAACGCTGCCTTCCAG
GTATCGCGGCGGATGTGGGAGAAGAACCGTGACCTAGGCTTTTTGGAGGG
CCGCCTCAAGGAGTGGACCATGCCCATGCAAGTCCGCAACGGCAAGGAAG
CTCGCGAACAGGCGTGGGGTTTCGATGCGACCAAGGTGCAGCTCCCCGGA
CTGGGAGATTCAACCTCGTCGCTGTATTCATCTGAAAAGGAGTTCCTATA
GATGATGGACCTTGGATATGAGGCGACTCCGCCACCTTCCGCCGGGAAGG
ATTGGGTCAGCTTCTGGAATTTTGTGGACCGAGCTCCCCCTCTCGAAGCC
GAATCGGTCCCCCGCGATATTTTGGTCGTGGGTGCCGGCATTGCAGGCAT
TGCCGTTGCCCTGGCCCTCTCAAAGGAATTGACGCCCTTTGTCCCCGATC
TCCGGATCACCGTCTATGAGCGACACGATATCCTGTCTACATCCGGCGGT
GCCATCAACCTCACTCCCGTTGCTCAGCGCCATCTTGATCGCTTGGGTGT
CCTTGACGAGCTGGACAAGCTGGGACCGGAATCTGGCACCGATGTAGATG
CTATCGAGCTGTTCTCCAGTCGCTCGGGACGCTCCCTCGGCGCCATAAAC
TTTACAGATGACAAGGGAAACGGCTTTGGTGGGTACAAGGGCCGCCGTGT
GATGCGTATCATCCTGTCCCTGGCCATGTTGAAGGTAGTCGAGCGCACTA
AGAATGTCAATGTGGTGTTTGGCAAGAAGCTGGTCCGCGGCAAGGAGACA
AAAGACAAGGCCGTCCTGTACTTCCAGGATGGTACAACGGCCACCGGAGA
CCTGGTTCTCGGCTGCGATGGGGTCCACTCCAACGTCCGCACCCACTGGG
TCTCTCCCGAGCACCCGTCCGAGTACACGGGCATCTCATTCGTCCAGACC
ATGATCGATAGCAAAGACATCAAGGCTCCCGTCCATTTCCGCTCCACCTC
GATGAACATTTCCCGTCATGGCTCTTTGCTTGCCAGTTATTGTGATCGAG
ATCATACTCAAATCTTTGTTGCTGCTATCGTGCAGTTCCGGGAGGAGCTC
CTATCGCATTACAAGATTGAGCCGGGTCAGGATTGGCGGCGCACCGCGGC
TATTAAAGATGCGCTTTGCCAAGAGATGCGCGACCGCTTCGGCCGGTCGG
GCCTCCCGGCCATCCGGGACATGGTCAACAAGGCCGACGACTGGATGCTC
TATCCTGTGTGGCAGGTTCGCCCTGGTGCACGCTGGTTTCGCAACCGAGT
CATCCTCCTCGGTGACGCGGCACATGCAATGCCGCCGCGTGATGAATCTG
CCGCGTACGCGCTAGACGACGCCATTCTCTTCTCGCGCATCCTAGCGAAG
CACCGCTACGATCCTCTCCCTGTTGCGTTCAAGGCTTACGAGGATCTGCG
GCGGGGAACGGTAAACGCTGCCTTCCAGGTATCGCGGCGGATGTGGGAGA
AGAACCGTGACCTAGGCTTTTTGGAGGGCCGCCTCAAGGAGTGGACCATG
CCCATGCAAGTCCGCAACGGCAAGGAAGCTCGCGAACAGGCGTGGGGTTT
CGATGCGACCAAGGTGCAGCTCCCCGGACTGGGAGATTCAACCTCGTCGC
TGTATTCATCTGAAAAGGAGTTCCTATAGATGATGGACCTTGGATATGAG
GCGACTCCGCCACCTTCCGCCGGGAAGGATTGGGTCAGCTTCTGGAATTT
TGTGGACCGAGCTCCCCCTCTCGAAGCCGAATCGGTCCCCCGCGATATTT
TGGTCGTGGGTGCCGGCATTGCAGGCATTGCCGTTGCCCTGGCCCTCTCA
AAGGAATTGACGCCCTTTGTCCCCGATCTCCGGATCACCGTCTATGAGCG
ACACGATATCCTGTCTACATCCGGCGGTGCCATCAACCTCACTCCCGTTG
CTCAGCGCCATCTTGATCGCTTGGGTGTCCTTGACGAGCTGGACAAGCTG
GGACCGGAATCTGGCACCGATGTAGATGCTATCGAGCTGTTCTCCAGTCG
CTCGGGACGCTCCCTCGGCGCCATAAACTTTACAGATGACAAGGGAAACG
GCTTTGGTGGGTACAAGGGCCGCCGTGTGATGCGTATCATCCTGTCCCTG
GCCATGTTGAAGGTAGTCGAGCGCACTAAGAATGTCAATGTGGTGTTTGG
CAAGAAGCTGGTCCGCGGCAAGGAGACAAAAGACAAGGCCGTCCTGTACT
TCCAGGATGGTACAACGGCCACCGGAGACCTGGTTCTCGGCTGCGATGGG
GTCCACTCCAACGTCCGCACCCACTGGGTCTCTCCCGAGCACCCGTCCGA
GTACACGGGCATCTCATTCGTCCAGACCATGATCGATAGCAAAGACATCA
AGGCTCCCGTCCATTTCCGCTCCACCTCGATGAACATTTCCCGTCATGGC
TCTTTGCTTGCCAGTTATTGTGATCGAGATCATACTCAAATCTTTGTTGC
TGCTATCGTGCAGTTCCGGGAGGAGCTCCTATCGCATTACAAGATTGAGC
CGGGTCAGGATTGGCGGCGCACCGCGGCTATTAAAGATGCGCTTTGCCAA
GAGATGCGCGACCGCTTCGGCCGGTCGGGCCTCCCGGCCATCCGGGACAT
GGTCAACAAGGCCGACGACTGGATGCTCTATCCTGTGTGGCAGGTTCGCC
CTGGTGCACGCTGGTTTCGCAACCGAGTCATCCTCCTCGGTGACGCGGCA
CATGCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0071949FAD binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006738KJC3_006738Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006738-T1KJC3_006738-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006738-T1.cdsKJC3_006738-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006738-T1.utr3p1KJC3_006738-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006738-T1.exon4KJC3_006738-T1.exon4Aspergillus niger KJC3exon
KJC3_006738-T1.exon3KJC3_006738-T1.exon3Aspergillus niger KJC3exon
KJC3_006738-T1.exon2KJC3_006738-T1.exon2Aspergillus niger KJC3exon
KJC3_006738-T1.exon1KJC3_006738-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006738-T1.utr5p3KJC3_006738-T1.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_006738-T1.utr5p2KJC3_006738-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_006738-T1.utr5p1KJC3_006738-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR002938
DBxrefInterPro:IPR036188
DBxrefPFAM:PF13450
DBxrefPFAM:PF01494
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:242666..245315 -
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