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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:811094..812636+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006905-T1 ID=KJC3_006905-T1|Name=KJC3_006905-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1543bp|location=Sequence derived from alignment at ch5:811094..812636+ (Aspergillus niger KJC3)
CACCTGGATCGGTTTCCAGATAGGTCCCGTTGCCGACGGTAAAGGTGCAT
GCAAGTCACACGTCTGCTGGTCGATCCGCCTTTATCCGCTACTCTCCATT
CGCCGTCTTGCGTCCCATACTTCTTCCCCTCACTCCCCCTCCGGCTCTCC
GACATAGACAAGAAAGAAAGCCTTCGCGAACAATCGCAATGGAGCCACAG
CCTGATCCAACTCAGACCATCAGTGCGGGTAAGGAACATAGCTCACTTCC
GAGGAGCTTCTACTATTAAGTGTGGAAGCTGACGTTTGACATTTCGCAAT
AGACGAGATAGCTCTTTACGATCGCCAGATCCGCCTCTGGGGAGTTAAAG
CACAAGAAAAGTGAGCTCTCCCACCTGACTACAATGTTTACCAACATTAT
CAAGCTGACGATAATTCCTCCGTAGGCTACGATCCGCAAATATCCTCCTC
ATCACCTTCAAGTCGCTGGCGAACGAAGTTGCGAAGAATCTGGTATTGGC
AGGCATTGGCTCCTTGACCATCGTTGATCATGAGGTGGTGACAGAAGAGG
ACTTGGGCGCGCAATTCTTTATAAATGAAGAACACCTGGGTCAAAACGTG
CGCTGTTCCATTCTAAACAAGCTTTGTCCACATACTGATCGCAACACAGC
GTGCGCAAGCGGCAGCGCCCTCGGTCCGCGCCATGAACCCGCGCGTCCAG
CTTCACATTGACACAGAAGACATCCACCTCAAACAGCCCGACTTCTTCGC
CCAGTTTGACATTACCATCGCAACCGAGCTTGACTTCCCTACATACACCA
CCATAAATGCGGCCTGTCGCATCGCAAACCGCCCCTTCTATGCCGCCGGG
CTGCACGGATTCTACGGCTTCGTCTTCGCCGATCTGATCTCGCACGATTT
CGTCATTGAGCGGACGAAGTCCAACGTCCAATCCGCCACGCAGGAAACCC
CGACCCGCAGCATCCTGAATATCACCACAAAGAAAGAGAACGAGAAAGTC
ATTGAAATGGTGACCAAGCGCGAGGTGTACTCTCCGCTGATCCTCGCAAA
CACCTCGCCACTTCCGGAGGAGTTCACCCGAATCGCACGCAAGCGCAAAC
AAGTGACACCCCTTCTCACCTGCCTCCGCGCATTATGGGAATACCAGAAA
TCATCCGCCGGCGCCCTGCCCACATTCTCCCACCAAGACCTGGAACTCTT
CACGAAGCACGCCCGCGACTGTCACCAAGAACTCAAGCTCGACATCACCA
CCTTGGACGCCGGGTTCCTGCGCACTTTCCTACAAAATCTGGGAAGTGAA
CTGAGCCCTGTAGCCGCATTTGTAGGCGGCCATCTCGCCCAGGACGTGAT
CAACGTCTTGAGCGCACGAGAACATCCCCTCCAGAACATGCTTCTCTTCG
ATGGAGAACGCTCCGCCGCTCCCATCTACCCCTTACATCCATTCTTCCCC
CCGGAAGTCGAGAGTGCCATTCCACCCGTGGTTCCAGTTGTGCAAGCCAT
CCCGTTAGATGGCGAGCCAGCCCCGGCACCTTTAATGCCCTAA back to topCoding sequence (CDS) from alignment at ch5:811094..812636+ >KJC3_006905-T1 ID=KJC3_006905-T1|Name=KJC3_006905-T1|organism=Aspergillus niger KJC3|type=CDS|length=4656bp|location=Sequence derived from alignment at ch5:811094..812636+ (Aspergillus niger KJC3)
ATGGAGCCACAGCCTGATCCAACTCAGACCATCAGTGCGGACGAGATAGC
TCTTTACGATCGCCAGATCCGCCTCTGGGGAGTTAAAGCACAAGAAAAGC
TACGATCCGCAAATATCCTCCTCATCACCTTCAAGTCGCTGGCGAACGAA
GTTGCGAAGAATCTGGTATTGGCAGGCATTGGCTCCTTGACCATCGTTGA
TCATGAGGTGGTGACAGAAGAGGACTTGGGCGCGCAATTCTTTATAAATG
AAGAACACCTGGGTCAAAACCGTGCGCAAGCGGCAGCGCCCTCGGTCCGC
GCCATGAACCCGCGCGTCCAGCTTCACATTGACACAGAAGACATCCACCT
CAAACAGCCCGACTTCTTCGCCCAGTTTGACATTACCATCGCAACCGAGC
TTGACTTCCCTACATACACCACCATAAATGCGGCCTGTCGCATCGCAAAC
CGCCCCTTCTATGCCGCCGGGCTGCACGGATTCTACGGCTTCGTCTTCGC
CGATCTGATCTCGCACGATTTCGTCATTGAGCGGACGAAGTCCAACGTCC
AATCCGCCACGCAGGAAACCCCGACCCGCAGCATCCTGAATATCACCACA
AAGAAAGAGAACGAGAAAGTCATTGAAATGGTGACCAAGCGCGAGGTGTA
CTCTCCGCTGATCCTCGCAAACACCTCGCCACTTCCGGAGGAGTTCACCC
GAATCGCACGCAAGCGCAAACAAGTGACACCCCTTCTCACCTGCCTCCGC
GCATTATGGGAATACCAGAAATCATCCGCCGGCGCCCTGCCCACATTCTC
CCACCAAGACCTGGAACTCTTCACGAAGCACGCCCGCGACTGTCACCAAG
AACTCAAGCTCGACATCACCACCTTGGACGCCGGGTTCCTGCGCACTTTC
CTACAAAATCTGGGAAGTGAACTGAGCCCTGTAGCCGCATTTGTAGGCGG
CCATCTCGCCCAGGACGTGATCAACGTCTTGAGCGCACGAGAACATCCCC
TCCAGAACATGCTTCTCTTCGATGGAGAACGCTCCGCCGCTCCCATCTAC
CCCTTACATCCATTCTTCCCCCCGGAAGTCGAGAGTGCCATTCCACCCGT
GGTTCCAGTTGTGCAAGCCATCCCGTTAGATGGCGAGCCAGCCCCGGCAC
CTTTAATGCCCTAAATGGAGCCACAGCCTGATCCAACTCAGACCATCAGT
GCGGACGAGATAGCTCTTTACGATCGCCAGATCCGCCTCTGGGGAGTTAA
AGCACAAGAAAAGCTACGATCCGCAAATATCCTCCTCATCACCTTCAAGT
CGCTGGCGAACGAAGTTGCGAAGAATCTGGTATTGGCAGGCATTGGCTCC
TTGACCATCGTTGATCATGAGGTGGTGACAGAAGAGGACTTGGGCGCGCA
ATTCTTTATAAATGAAGAACACCTGGGTCAAAACCGTGCGCAAGCGGCAG
CGCCCTCGGTCCGCGCCATGAACCCGCGCGTCCAGCTTCACATTGACACA
GAAGACATCCACCTCAAACAGCCCGACTTCTTCGCCCAGTTTGACATTAC
CATCGCAACCGAGCTTGACTTCCCTACATACACCACCATAAATGCGGCCT
GTCGCATCGCAAACCGCCCCTTCTATGCCGCCGGGCTGCACGGATTCTAC
GGCTTCGTCTTCGCCGATCTGATCTCGCACGATTTCGTCATTGAGCGGAC
GAAGTCCAACGTCCAATCCGCCACGCAGGAAACCCCGACCCGCAGCATCC
TGAATATCACCACAAAGAAAGAGAACGAGAAAGTCATTGAAATGGTGACC
AAGCGCGAGGTGTACTCTCCGCTGATCCTCGCAAACACCTCGCCACTTCC
GGAGGAGTTCACCCGAATCGCACGCAAGCGCAAACAAGTGACACCCCTTC
TCACCTGCCTCCGCGCATTATGGGAATACCAGAAATCATCCGCCGGCGCC
CTGCCCACATTCTCCCACCAAGACCTGGAACTCTTCACGAAGCACGCCCG
CGACTGTCACCAAGAACTCAAGCTCGACATCACCACCTTGGACGCCGGGT
TCCTGCGCACTTTCCTACAAAATCTGGGAAGTGAACTGAGCCCTGTAGCC
GCATTTGTAGGCGGCCATCTCGCCCAGGACGTGATCAACGTCTTGAGCGC
ACGAGAACATCCCCTCCAGAACATGCTTCTCTTCGATGGAGAACGCTCCG
CCGCTCCCATCTACCCCTTACATCCATTCTTCCCCCCGGAAGTCGAGAGT
GCCATTCCACCCGTGGTTCCAGTTGTGCAAGCCATCCCGTTAGATGGCGA
GCCAGCCCCGGCACCTTTAATGCCCTAAATGGAGCCACAGCCTGATCCAA
CTCAGACCATCAGTGCGGACGAGATAGCTCTTTACGATCGCCAGATCCGC
CTCTGGGGAGTTAAAGCACAAGAAAAGCTACGATCCGCAAATATCCTCCT
CATCACCTTCAAGTCGCTGGCGAACGAAGTTGCGAAGAATCTGGTATTGG
CAGGCATTGGCTCCTTGACCATCGTTGATCATGAGGTGGTGACAGAAGAG
GACTTGGGCGCGCAATTCTTTATAAATGAAGAACACCTGGGTCAAAACCG
TGCGCAAGCGGCAGCGCCCTCGGTCCGCGCCATGAACCCGCGCGTCCAGC
TTCACATTGACACAGAAGACATCCACCTCAAACAGCCCGACTTCTTCGCC
CAGTTTGACATTACCATCGCAACCGAGCTTGACTTCCCTACATACACCAC
CATAAATGCGGCCTGTCGCATCGCAAACCGCCCCTTCTATGCCGCCGGGC
TGCACGGATTCTACGGCTTCGTCTTCGCCGATCTGATCTCGCACGATTTC
GTCATTGAGCGGACGAAGTCCAACGTCCAATCCGCCACGCAGGAAACCCC
GACCCGCAGCATCCTGAATATCACCACAAAGAAAGAGAACGAGAAAGTCA
TTGAAATGGTGACCAAGCGCGAGGTGTACTCTCCGCTGATCCTCGCAAAC
ACCTCGCCACTTCCGGAGGAGTTCACCCGAATCGCACGCAAGCGCAAACA
AGTGACACCCCTTCTCACCTGCCTCCGCGCATTATGGGAATACCAGAAAT
CATCCGCCGGCGCCCTGCCCACATTCTCCCACCAAGACCTGGAACTCTTC
ACGAAGCACGCCCGCGACTGTCACCAAGAACTCAAGCTCGACATCACCAC
CTTGGACGCCGGGTTCCTGCGCACTTTCCTACAAAATCTGGGAAGTGAAC
TGAGCCCTGTAGCCGCATTTGTAGGCGGCCATCTCGCCCAGGACGTGATC
AACGTCTTGAGCGCACGAGAACATCCCCTCCAGAACATGCTTCTCTTCGA
TGGAGAACGCTCCGCCGCTCCCATCTACCCCTTACATCCATTCTTCCCCC
CGGAAGTCGAGAGTGCCATTCCACCCGTGGTTCCAGTTGTGCAAGCCATC
CCGTTAGATGGCGAGCCAGCCCCGGCACCTTTAATGCCCTAAATGGAGCC
ACAGCCTGATCCAACTCAGACCATCAGTGCGGACGAGATAGCTCTTTACG
ATCGCCAGATCCGCCTCTGGGGAGTTAAAGCACAAGAAAAGCTACGATCC
GCAAATATCCTCCTCATCACCTTCAAGTCGCTGGCGAACGAAGTTGCGAA
GAATCTGGTATTGGCAGGCATTGGCTCCTTGACCATCGTTGATCATGAGG
TGGTGACAGAAGAGGACTTGGGCGCGCAATTCTTTATAAATGAAGAACAC
CTGGGTCAAAACCGTGCGCAAGCGGCAGCGCCCTCGGTCCGCGCCATGAA
CCCGCGCGTCCAGCTTCACATTGACACAGAAGACATCCACCTCAAACAGC
CCGACTTCTTCGCCCAGTTTGACATTACCATCGCAACCGAGCTTGACTTC
CCTACATACACCACCATAAATGCGGCCTGTCGCATCGCAAACCGCCCCTT
CTATGCCGCCGGGCTGCACGGATTCTACGGCTTCGTCTTCGCCGATCTGA
TCTCGCACGATTTCGTCATTGAGCGGACGAAGTCCAACGTCCAATCCGCC
ACGCAGGAAACCCCGACCCGCAGCATCCTGAATATCACCACAAAGAAAGA
GAACGAGAAAGTCATTGAAATGGTGACCAAGCGCGAGGTGTACTCTCCGC
TGATCCTCGCAAACACCTCGCCACTTCCGGAGGAGTTCACCCGAATCGCA
CGCAAGCGCAAACAAGTGACACCCCTTCTCACCTGCCTCCGCGCATTATG
GGAATACCAGAAATCATCCGCCGGCGCCCTGCCCACATTCTCCCACCAAG
ACCTGGAACTCTTCACGAAGCACGCCCGCGACTGTCACCAAGAACTCAAG
CTCGACATCACCACCTTGGACGCCGGGTTCCTGCGCACTTTCCTACAAAA
TCTGGGAAGTGAACTGAGCCCTGTAGCCGCATTTGTAGGCGGCCATCTCG
CCCAGGACGTGATCAACGTCTTGAGCGCACGAGAACATCCCCTCCAGAAC
ATGCTTCTCTTCGATGGAGAACGCTCCGCCGCTCCCATCTACCCCTTACA
TCCATTCTTCCCCCCGGAAGTCGAGAGTGCCATTCCACCCGTGGTTCCAG
TTGTGCAAGCCATCCCGTTAGATGGCGAGCCAGCCCCGGCACCTTTAATG
CCCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008641 | ubiquitin-like modifier activating enzyme activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006464 | cellular protein modification process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006905-T1.utr5p1 | KJC3_006905-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035985 |
| DBxref | InterPro:IPR000594 |
| DBxref | InterPro:IPR000011 |
| DBxref | PFAM:PF00899 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:811094..812636 + |
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