You are here

Home

KJC3_006950-T1, KJC3_006950-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006950-T1
Unique NameKJC3_006950-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:951337..952338+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006950-T1 ID=KJC3_006950-T1|Name=KJC3_006950-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1002bp|location=Sequence derived from alignment at ch5:951337..952338+ (Aspergillus niger KJC3)
ATGGAGCCTCTCAAGGTCGCATTCCTCGGCCCTGTCGCGTCATTTTCCCA
CCAGGTCAGAAATTCATCAGGTTGGATTTCACCATAGTCATATTACTAAC
CAACCCTTTAGGCCGCAGTTGAAAGCTTTGGGTCTTCAGCTGAACTTTTA
CCCCACGTATCGTTTCCGGACGCTTTCGCAGCATTGCAAGGAGGCAGAGT
CGATTATGCTATCATCCCTTGCGAGAACTCAACCAATGGCTCGGTTGTTC
AGACTCTAGATCTCTTGGCGGACCCGAGTGGCCTCTACAGTGATGTGAAA
GTGTGCGGGGAACATTATCTGACAGTTCACCACTGTCTTCTCACTCGAAA
GGGTCTCTTCCCACCTGGTCAGCGAGATTACAGCTCCATCACCAAGTTAT
ATACCCACCCGCAGGCATGGGGCCAGTGTGATACTTTTCTTGAAAAAACT
TTCAAAGGCATCGAAAGACAAGATGTCTCGTCAACCTCCAAGGGCGCTGA
GATCGTGTCGAAGGAGACGACAGAGCGATGTGGAGCAATAGCTAGCCGCT
TTGCTGCCGAACATCACGGTCTGGATGTATCAGAGGAAAACATTGAGGAC
AAGGCCAATAACACCACCCGCTTCCTGGTGCTCAGAAATGTGAAATCGGA
ACGTACAGGCCGGCTGGTCTTCCAATATGTCAACGGTTCCCCAGCGCAGA
GACAGACTTCTACTACACCAACAGCGCAAAAGACTTTGATCTCATTCATG
ATTCGCCAGGACTGCCCGGGTGCTTTGGCAGATGCTCTCTTGATCTTCAA
GGATCGTGGCATGAATCTGACGAGCATAAATTCTCGACCGAGTCAGATAA
GGGCGTGGAAGTATGTATTCCTGGTCGAAGGCCAATACGTCCCAACAAGT
GAAAATGCGGATGCGGTATCTAAGATCATTGATGGGCTACAATTTGTAAC
TGAGGGTTGCAGGCATTTGGGAACATGGGCGGATCAGCTCGTAGATGTCT
AA
back to top

Coding sequence (CDS) from alignment at ch5:951337..952338+

>KJC3_006950-T1 ID=KJC3_006950-T1|Name=KJC3_006950-T1|organism=Aspergillus niger KJC3|type=CDS|length=1890bp|location=Sequence derived from alignment at ch5:951337..952338+ (Aspergillus niger KJC3)
ATGGAGCCTCTCAAGGTCGCATTCCTCGGCCCTGTCGCGTCATTTTCCCA
CCAGGCCGCAGTTGAAAGCTTTGGGTCTTCAGCTGAACTTTTACCCCACG
TATCGTTTCCGGACGCTTTCGCAGCATTGCAAGGAGGCAGAGTCGATTAT
GCTATCATCCCTTGCGAGAACTCAACCAATGGCTCGGTTGTTCAGACTCT
AGATCTCTTGGCGGACCCGAGTGGCCTCTACAGTGATGTGAAAGTGTGCG
GGGAACATTATCTGACAGTTCACCACTGTCTTCTCACTCGAAAGGGTCTC
TTCCCACCTGGTCAGCGAGATTACAGCTCCATCACCAAGTTATATACCCA
CCCGCAGGCATGGGGCCAGTGTGATACTTTTCTTGAAAAAACTTTCAAAG
GCATCGAAAGACAAGATGTCTCGTCAACCTCCAAGGGCGCTGAGATCGTG
TCGAAGGAGACGACAGAGCGATGTGGAGCAATAGCTAGCCGCTTTGCTGC
CGAACATCACGGTCTGGATGTATCAGAGGAAAACATTGAGGACAAGGCCA
ATAACACCACCCGCTTCCTGGTGCTCAGAAATGTGAAATCGGAACGTACA
GGCCGGCTGGTCTTCCAATATGTCAACGGTTCCCCAGCGCAGAGACAGAC
TTCTACTACACCAACAGCGCAAAAGACTTTGATCTCATTCATGATTCGCC
AGGACTGCCCGGGTGCTTTGGCAGATGCTCTCTTGATCTTCAAGGATCGT
GGCATGAATCTGACGAGCATAAATTCTCGACCGAGTCAGATAAGGGCGTG
GAAGTATGTATTCCTGGTCGAAGGCCAATACGTCCCAACAAGTGAAAATG
CGGATGCGGTATCTAAGATCATTGATGGGCTACAATTTGTAACTGAGGGT
TGCAGGCATTTGGGAACATGGGCGGATCAGCTCGTAGATGTCTAAATGGA
GCCTCTCAAGGTCGCATTCCTCGGCCCTGTCGCGTCATTTTCCCACCAGG
CCGCAGTTGAAAGCTTTGGGTCTTCAGCTGAACTTTTACCCCACGTATCG
TTTCCGGACGCTTTCGCAGCATTGCAAGGAGGCAGAGTCGATTATGCTAT
CATCCCTTGCGAGAACTCAACCAATGGCTCGGTTGTTCAGACTCTAGATC
TCTTGGCGGACCCGAGTGGCCTCTACAGTGATGTGAAAGTGTGCGGGGAA
CATTATCTGACAGTTCACCACTGTCTTCTCACTCGAAAGGGTCTCTTCCC
ACCTGGTCAGCGAGATTACAGCTCCATCACCAAGTTATATACCCACCCGC
AGGCATGGGGCCAGTGTGATACTTTTCTTGAAAAAACTTTCAAAGGCATC
GAAAGACAAGATGTCTCGTCAACCTCCAAGGGCGCTGAGATCGTGTCGAA
GGAGACGACAGAGCGATGTGGAGCAATAGCTAGCCGCTTTGCTGCCGAAC
ATCACGGTCTGGATGTATCAGAGGAAAACATTGAGGACAAGGCCAATAAC
ACCACCCGCTTCCTGGTGCTCAGAAATGTGAAATCGGAACGTACAGGCCG
GCTGGTCTTCCAATATGTCAACGGTTCCCCAGCGCAGAGACAGACTTCTA
CTACACCAACAGCGCAAAAGACTTTGATCTCATTCATGATTCGCCAGGAC
TGCCCGGGTGCTTTGGCAGATGCTCTCTTGATCTTCAAGGATCGTGGCAT
GAATCTGACGAGCATAAATTCTCGACCGAGTCAGATAAGGGCGTGGAAGT
ATGTATTCCTGGTCGAAGGCCAATACGTCCCAACAAGTGAAAATGCGGAT
GCGGTATCTAAGATCATTGATGGGCTACAATTTGTAACTGAGGGTTGCAG
GCATTTGGGAACATGGGCGGATCAGCTCGTAGATGTCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004106chorismate mutase activity
GO:0004664prephenate dehydratase activity
Vocabulary: Biological Process
TermDefinition
GO:0009094L-phenylalanine biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006950KJC3_006950Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006950-T1.exon1KJC3_006950-T1.exon1Aspergillus niger KJC3exon
KJC3_006950-T1.exon2KJC3_006950-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006950-T1.cdsKJC3_006950-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006950-T1KJC3_006950-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR002912
DBxrefInterPro:IPR008242
DBxrefInterPro:IPR001086
DBxrefPFAM:PF00800
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:951337..952338 +
Powered by Drupal