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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:995182..997341- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006968-T2 ID=KJC3_006968-T2|Name=KJC3_006968-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2160bp|location=Sequence derived from alignment at ch5:995182..997341- (Aspergillus niger KJC3) GTTCTCTAGCCCCTCCTTTCCAACTTATTACAAGCTGTCCTCCCCGCCAA
CTGTCGCCGCTATTTTGTCCCCTCTACTTGGATGTTGAGACACTAAATTT
TTGTACTGTACAAGGATAATTCGTTCAACATGCTTGATCTGGCAGACTTC
ATCAGTGATCGCGGTGGCGATCCGAACAAAATCAAAGAGAGCCAACGGAA
ACGCTACGCCCCAGAAAGTGTCGTTGATGAGGTCCTCTCCCTATACGAAG
AGGCGCGGCGTGGTATGTTATTTGCTTTTTCACAGATATTTCACATTTTA
AACGGCTGATCTGTGATATCCTATAGCACGGTATGAGGTTATGCAGATTA
ACTCCCAGCTCAATGCCCTTCAAAAGGAGATTGGCAAGAGAAAGAAGGTT
CGCATTTATTTTACATATATACCAAATTCTACTGTGATTTAATTTAACTA
TTTTATCCCTTATTGCGGTGGCAAAAAACTGACATATAATTCTGAAAAAG
AATAAGGAAGACGCGAATGACCTGATGGAACAGAAAGCCAACCTCGAGAA
AAGCAAGAAGGACGCCGAGGAACTTGCTATCCAAAAGGAAAAGCAAAGAG
ACAGCAAAATTCGGACCATTGGCAACATTGTTCATGATTCTGTTCCCGTG
AGCAACAATGAAGTACGTATTGTACTCGGTCTGAGACGAGAGACTCATCT
AACCGAAAGGACTACTGTTAGGACGACAACGCCGTAATAAGGAAGTGGGC
GCCCGACAATGTGAAGGTCGAGAAGCGCAACTGTCTCTCTCACCATGAGG
TTCTCACTCGTCTAGATGGGTTCGATTCAGAGCGTGGGGTCAAAGTGGTT
GGCCACCGCGGCTACTGTTTGACAGGTTATGGGCTTTTCCTCAATCTCGC
GCTCATCAACTATGGCTTAGAATTCCTCTGGGGTAAAGGCTACAAGCCTA
ACCAACCCCCTCAATTCATGCTCAAGGACATGATGGCGAAGACCGCCCAG
CTTGAACAGTTCGACGAGGAGCTCTACAAAGTCACGGAAAGTGAAGACAA
GTCCACCGACAAGTATCTAATTGCTACTTCAGAGCAACCACTTTCAGCCT
TGCATGACGGAGAGTGGCTGCAAGATAAAGATCTCCCAATCAAGTTGGTG
GTCCCAGCATGTCCAGTCAACTTCTCTTTTAGGCTAACCAGCACACAGGT
ACGCTGGATATAGCACTTGCTACCGGAAAGAGGCAGGTGCTCATGGTAAG
GATGCATGGGGCATCTTTCGTGTCCATCAGTTCGAGAAGGTGATACGCCC
TGGGCTACCCATGTTGCTTGTCATGCTAACTCAGCCCAGATCGAACAATT
TGTCCTCACGAAACCGGAAGACTCGTGGCAAGCTTTTGACGAAATGATGG
CCACTTCGGAAGAATTCTACCGGTCTCTTGGCCTACCGTACCAGGTTGTC
GCTATTGTTTCGGGAGCATTGAACAATGCCGCATCGAAGAAGTATGACCT
CGAGGCGTGGTTCCCATTTCAAGGAGAGTATAAGGAATTAGTATCCTGCT
CCAACTGTACCGATTATCAATCCAGAGCCCTAGAGATTCGCTATGGCACG
AAGAAGGCTACTGATGTGAAGAAGTCCTACGTTCATGCCCTGAATGCGAC
TTTGTGTGCAACCGAACGTACACTCTGCTGTGTGCTTGAGAACTACCAGA
CTGATGATGTACGTCATGACTCTGACCCACATGCTGCTGGTGATGATACT
GATAATGTTTTAGGGTATTATTGTGCCGGAGCCTTTGAGAAAGTATATCC
CGGGCGCTCCCGAATTTATCCCATACTCTAAAGAGCTGCCGAAAGATAGT
ACTTCCAACAAAAACAAAGCCAAGCAGACTACAAAGGCTACAAGTGGTGC
AGATGAGACTGCGAAGAAATTGGAAGGCCTTCAGGTTTAAAATCTAGCAG
TTAAGTTTTAGTTTAGACGAGATCAATTAGCGGGTCATTGGCTGTTATAT
GAGCATCTCGATTAACCAAGCACAAAAAGATGAAAGCTGTAGAAGCGAGA
TCCTAGTGACCTGGGTCTAAAGACCATTGTTATTGCAGTTATAAGCCATG
GCAATTGATTGATATGGAGTGCAAGGAGCTAATCTATGAATTTATCGTTT
GGCCTATCGC back to topCoding sequence (CDS) from alignment at ch5:995182..997341- >KJC3_006968-T2 ID=KJC3_006968-T2|Name=KJC3_006968-T2|organism=Aspergillus niger KJC3|type=CDS|length=7668bp|location=Sequence derived from alignment at ch5:995182..997341- (Aspergillus niger KJC3) GGTATTATTGTGCCGGAGCCTTTGAGAAAGTATATCCCGGGCGCTCCCGA ATTTATCCCATACTCTAAAGAGCTGCCGAAAGATAGTACTTCCAACAAAA ACAAAGCCAAGCAGACTACAAAGGCTACAAGTGGTGCAGATGAGACTGCG AAGAAATTGGAAGGCCTTCAGGTTTAAATCGAACAATTTGTCCTCACGAA ACCGGAAGACTCGTGGCAAGCTTTTGACGAAATGATGGCCACTTCGGAAG AATTCTACCGGTCTCTTGGCCTACCGTACCAGGTTGTCGCTATTGTTTCG GGAGCATTGAACAATGCCGCATCGAAGAAGTATGACCTCGAGGCGTGGTT CCCATTTCAAGGAGAGTATAAGGAATTAGTATCCTGCTCCAACTGTACCG ATTATCAATCCAGAGCCCTAGAGATTCGCTATGGCACGAAGAAGGCTACT GATGTGAAGAAGTCCTACGTTCATGCCCTGAATGCGACTTTGTGTGCAAC CGAACGTACACTCTGCTGTGTGCTTGAGAACTACCAGACTGATGATGTAC GCTGGATATAGCACTTGCTACCGGAAAGAGGCAGGTGCTCATGGTAAGGA TGCATGGGGCATCTTTCGTGTCCATCAGTTCGAGAAGGACGACAACGCCG TAATAAGGAAGTGGGCGCCCGACAATGTGAAGGTCGAGAAGCGCAACTGT CTCTCTCACCATGAGGTTCTCACTCGTCTAGATGGGTTCGATTCAGAGCG TGGGGTCAAAGTGGTTGGCCACCGCGGCTACTGTTTGACAGGTTATGGGC TTTTCCTCAATCTCGCGCTCATCAACTATGGCTTAGAATTCCTCTGGGGT AAAGGCTACAAGCCTAACCAACCCCCTCAATTCATGCTCAAGGACATGAT GGCGAAGACCGCCCAGCTTGAACAGTTCGACGAGGAGCTCTACAAAGTCA CGGAAAGTGAAGACAAGTCCACCGACAAGTATCTAATTGCTACTTCAGAG CAACCACTTTCAGCCTTGCATGACGGAGAGTGGCTGCAAGATAAAGATCT CCCAATCAAAATAAGGAAGACGCGAATGACCTGATGGAACAGAAAGCCAA CCTCGAGAAAAGCAAGAAGGACGCCGAGGAACTTGCTATCCAAAAGGAAA AGCAAAGAGACAGCAAAATTCGGACCATTGGCAACATTGTTCATGATTCT GTTCCCGTGAGCAACAATGAAATGCAGATTAACTCCCAGCTCAATGCCCT TCAAAAGGAGATTGGCAAGAGAAAGAAGGGTATTATTGTGCCGGAGCCTT TGAGAAAGTATATCCCGGGCGCTCCCGAATTTATCCCATACTCTAAAGAG CTGCCGAAAGATAGTACTTCCAACAAAAACAAAGCCAAGCAGACTACAAA GGCTACAAGTGGTGCAGATGAGACTGCGAAGAAATTGGAAGGCCTTCAGG TTTAAATCGAACAATTTGTCCTCACGAAACCGGAAGACTCGTGGCAAGCT TTTGACGAAATGATGGCCACTTCGGAAGAATTCTACCGGTCTCTTGGCCT ACCGTACCAGGTTGTCGCTATTGTTTCGGGAGCATTGAACAATGCCGCAT CGAAGAAGTATGACCTCGAGGCGTGGTTCCCATTTCAAGGAGAGTATAAG GAATTAGTATCCTGCTCCAACTGTACCGATTATCAATCCAGAGCCCTAGA GATTCGCTATGGCACGAAGAAGGCTACTGATGTGAAGAAGTCCTACGTTC ATGCCCTGAATGCGACTTTGTGTGCAACCGAACGTACACTCTGCTGTGTG CTTGAGAACTACCAGACTGATGATGTACGCTGGATATAGCACTTGCTACC GGAAAGAGGCAGGTGCTCATGGTAAGGATGCATGGGGCATCTTTCGTGTC CATCAGTTCGAGAAGGACGACAACGCCGTAATAAGGAAGTGGGCGCCCGA CAATGTGAAGGTCGAGAAGCGCAACTGTCTCTCTCACCATGAGGTTCTCA CTCGTCTAGATGGGTTCGATTCAGAGCGTGGGGTCAAAGTGGTTGGCCAC CGCGGCTACTGTTTGACAGGTTATGGGCTTTTCCTCAATCTCGCGCTCAT CAACTATGGCTTAGAATTCCTCTGGGGTAAAGGCTACAAGCCTAACCAAC CCCCTCAATTCATGCTCAAGGACATGATGGCGAAGACCGCCCAGCTTGAA CAGTTCGACGAGGAGCTCTACAAAGTCACGGAAAGTGAAGACAAGTCCAC CGACAAGTATCTAATTGCTACTTCAGAGCAACCACTTTCAGCCTTGCATG ACGGAGAGTGGCTGCAAGATAAAGATCTCCCAATCAAAATAAGGAAGACG CGAATGACCTGATGGAACAGAAAGCCAACCTCGAGAAAAGCAAGAAGGAC GCCGAGGAACTTGCTATCCAAAAGGAAAAGCAAAGAGACAGCAAAATTCG GACCATTGGCAACATTGTTCATGATTCTGTTCCCGTGAGCAACAATGAAA TGCAGATTAACTCCCAGCTCAATGCCCTTCAAAAGGAGATTGGCAAGAGA AAGAAGGGTATTATTGTGCCGGAGCCTTTGAGAAAGTATATCCCGGGCGC TCCCGAATTTATCCCATACTCTAAAGAGCTGCCGAAAGATAGTACTTCCA ACAAAAACAAAGCCAAGCAGACTACAAAGGCTACAAGTGGTGCAGATGAG ACTGCGAAGAAATTGGAAGGCCTTCAGGTTTAAATCGAACAATTTGTCCT CACGAAACCGGAAGACTCGTGGCAAGCTTTTGACGAAATGATGGCCACTT CGGAAGAATTCTACCGGTCTCTTGGCCTACCGTACCAGGTTGTCGCTATT GTTTCGGGAGCATTGAACAATGCCGCATCGAAGAAGTATGACCTCGAGGC GTGGTTCCCATTTCAAGGAGAGTATAAGGAATTAGTATCCTGCTCCAACT GTACCGATTATCAATCCAGAGCCCTAGAGATTCGCTATGGCACGAAGAAG GCTACTGATGTGAAGAAGTCCTACGTTCATGCCCTGAATGCGACTTTGTG TGCAACCGAACGTACACTCTGCTGTGTGCTTGAGAACTACCAGACTGATG ATGTACGCTGGATATAGCACTTGCTACCGGAAAGAGGCAGGTGCTCATGG TAAGGATGCATGGGGCATCTTTCGTGTCCATCAGTTCGAGAAGGACGACA ACGCCGTAATAAGGAAGTGGGCGCCCGACAATGTGAAGGTCGAGAAGCGC AACTGTCTCTCTCACCATGAGGTTCTCACTCGTCTAGATGGGTTCGATTC AGAGCGTGGGGTCAAAGTGGTTGGCCACCGCGGCTACTGTTTGACAGGTT ATGGGCTTTTCCTCAATCTCGCGCTCATCAACTATGGCTTAGAATTCCTC TGGGGTAAAGGCTACAAGCCTAACCAACCCCCTCAATTCATGCTCAAGGA CATGATGGCGAAGACCGCCCAGCTTGAACAGTTCGACGAGGAGCTCTACA AAGTCACGGAAAGTGAAGACAAGTCCACCGACAAGTATCTAATTGCTACT TCAGAGCAACCACTTTCAGCCTTGCATGACGGAGAGTGGCTGCAAGATAA AGATCTCCCAATCAAAATAAGGAAGACGCGAATGACCTGATGGAACAGAA AGCCAACCTCGAGAAAAGCAAGAAGGACGCCGAGGAACTTGCTATCCAAA AGGAAAAGCAAAGAGACAGCAAAATTCGGACCATTGGCAACATTGTTCAT GATTCTGTTCCCGTGAGCAACAATGAAATGCAGATTAACTCCCAGCTCAA TGCCCTTCAAAAGGAGATTGGCAAGAGAAAGAAGGGTATTATTGTGCCGG AGCCTTTGAGAAAGTATATCCCGGGCGCTCCCGAATTTATCCCATACTCT AAAGAGCTGCCGAAAGATAGTACTTCCAACAAAAACAAAGCCAAGCAGAC TACAAAGGCTACAAGTGGTGCAGATGAGACTGCGAAGAAATTGGAAGGCC TTCAGGTTTAAATCGAACAATTTGTCCTCACGAAACCGGAAGACTCGTGG CAAGCTTTTGACGAAATGATGGCCACTTCGGAAGAATTCTACCGGTCTCT TGGCCTACCGTACCAGGTTGTCGCTATTGTTTCGGGAGCATTGAACAATG CCGCATCGAAGAAGTATGACCTCGAGGCGTGGTTCCCATTTCAAGGAGAG TATAAGGAATTAGTATCCTGCTCCAACTGTACCGATTATCAATCCAGAGC CCTAGAGATTCGCTATGGCACGAAGAAGGCTACTGATGTGAAGAAGTCCT ACGTTCATGCCCTGAATGCGACTTTGTGTGCAACCGAACGTACACTCTGC TGTGTGCTTGAGAACTACCAGACTGATGATGTACGCTGGATATAGCACTT GCTACCGGAAAGAGGCAGGTGCTCATGGTAAGGATGCATGGGGCATCTTT CGTGTCCATCAGTTCGAGAAGGACGACAACGCCGTAATAAGGAAGTGGGC GCCCGACAATGTGAAGGTCGAGAAGCGCAACTGTCTCTCTCACCATGAGG TTCTCACTCGTCTAGATGGGTTCGATTCAGAGCGTGGGGTCAAAGTGGTT GGCCACCGCGGCTACTGTTTGACAGGTTATGGGCTTTTCCTCAATCTCGC GCTCATCAACTATGGCTTAGAATTCCTCTGGGGTAAAGGCTACAAGCCTA ACCAACCCCCTCAATTCATGCTCAAGGACATGATGGCGAAGACCGCCCAG CTTGAACAGTTCGACGAGGAGCTCTACAAAGTCACGGAAAGTGAAGACAA GTCCACCGACAAGTATCTAATTGCTACTTCAGAGCAACCACTTTCAGCCT TGCATGACGGAGAGTGGCTGCAAGATAAAGATCTCCCAATCAAAATAAGG AAGACGCGAATGACCTGATGGAACAGAAAGCCAACCTCGAGAAAAGCAAG AAGGACGCCGAGGAACTTGCTATCCAAAAGGAAAAGCAAAGAGACAGCAA AATTCGGACCATTGGCAACATTGTTCATGATTCTGTTCCCGTGAGCAACA ATGAAATGCAGATTAACTCCCAGCTCAATGCCCTTCAAAAGGAGATTGGC AAGAGAAAGAAGGGTATTATTGTGCCGGAGCCTTTGAGAAAGTATATCCC GGGCGCTCCCGAATTTATCCCATACTCTAAAGAGCTGCCGAAAGATAGTA CTTCCAACAAAAACAAAGCCAAGCAGACTACAAAGGCTACAAGTGGTGCA GATGAGACTGCGAAGAAATTGGAAGGCCTTCAGGTTTAAATCGAACAATT TGTCCTCACGAAACCGGAAGACTCGTGGCAAGCTTTTGACGAAATGATGG CCACTTCGGAAGAATTCTACCGGTCTCTTGGCCTACCGTACCAGGTTGTC GCTATTGTTTCGGGAGCATTGAACAATGCCGCATCGAAGAAGTATGACCT CGAGGCGTGGTTCCCATTTCAAGGAGAGTATAAGGAATTAGTATCCTGCT CCAACTGTACCGATTATCAATCCAGAGCCCTAGAGATTCGCTATGGCACG AAGAAGGCTACTGATGTGAAGAAGTCCTACGTTCATGCCCTGAATGCGAC TTTGTGTGCAACCGAACGTACACTCTGCTGTGTGCTTGAGAACTACCAGA CTGATGATGTACGCTGGATATAGCACTTGCTACCGGAAAGAGGCAGGTGC TCATGGTAAGGATGCATGGGGCATCTTTCGTGTCCATCAGTTCGAGAAGG ACGACAACGCCGTAATAAGGAAGTGGGCGCCCGACAATGTGAAGGTCGAG AAGCGCAACTGTCTCTCTCACCATGAGGTTCTCACTCGTCTAGATGGGTT CGATTCAGAGCGTGGGGTCAAAGTGGTTGGCCACCGCGGCTACTGTTTGA CAGGTTATGGGCTTTTCCTCAATCTCGCGCTCATCAACTATGGCTTAGAA TTCCTCTGGGGTAAAGGCTACAAGCCTAACCAACCCCCTCAATTCATGCT CAAGGACATGATGGCGAAGACCGCCCAGCTTGAACAGTTCGACGAGGAGC TCTACAAAGTCACGGAAAGTGAAGACAAGTCCACCGACAAGTATCTAATT GCTACTTCAGAGCAACCACTTTCAGCCTTGCATGACGGAGAGTGGCTGCA AGATAAAGATCTCCCAATCAAAATAAGGAAGACGCGAATGACCTGATGGA ACAGAAAGCCAACCTCGAGAAAAGCAAGAAGGACGCCGAGGAACTTGCTA TCCAAAAGGAAAAGCAAAGAGACAGCAAAATTCGGACCATTGGCAACATT GTTCATGATTCTGTTCCCGTGAGCAACAATGAAATGCAGATTAACTCCCA GCTCAATGCCCTTCAAAAGGAGATTGGCAAGAGAAAGAAGGGTATTATTG TGCCGGAGCCTTTGAGAAAGTATATCCCGGGCGCTCCCGAATTTATCCCA TACTCTAAAGAGCTGCCGAAAGATAGTACTTCCAACAAAAACAAAGCCAA GCAGACTACAAAGGCTACAAGTGGTGCAGATGAGACTGCGAAGAAATTGG AAGGCCTTCAGGTTTAAATCGAACAATTTGTCCTCACGAAACCGGAAGAC TCGTGGCAAGCTTTTGACGAAATGATGGCCACTTCGGAAGAATTCTACCG GTCTCTTGGCCTACCGTACCAGGTTGTCGCTATTGTTTCGGGAGCATTGA ACAATGCCGCATCGAAGAAGTATGACCTCGAGGCGTGGTTCCCATTTCAA GGAGAGTATAAGGAATTAGTATCCTGCTCCAACTGTACCGATTATCAATC CAGAGCCCTAGAGATTCGCTATGGCACGAAGAAGGCTACTGATGTGAAGA AGTCCTACGTTCATGCCCTGAATGCGACTTTGTGTGCAACCGAACGTACA CTCTGCTGTGTGCTTGAGAACTACCAGACTGATGATGTACGCTGGATATA GCACTTGCTACCGGAAAGAGGCAGGTGCTCATGGTAAGGATGCATGGGGC ATCTTTCGTGTCCATCAGTTCGAGAAGGACGACAACGCCGTAATAAGGAA GTGGGCGCCCGACAATGTGAAGGTCGAGAAGCGCAACTGTCTCTCTCACC ATGAGGTTCTCACTCGTCTAGATGGGTTCGATTCAGAGCGTGGGGTCAAA GTGGTTGGCCACCGCGGCTACTGTTTGACAGGTTATGGGCTTTTCCTCAA TCTCGCGCTCATCAACTATGGCTTAGAATTCCTCTGGGGTAAAGGCTACA AGCCTAACCAACCCCCTCAATTCATGCTCAAGGACATGATGGCGAAGACC GCCCAGCTTGAACAGTTCGACGAGGAGCTCTACAAAGTCACGGAAAGTGA AGACAAGTCCACCGACAAGTATCTAATTGCTACTTCAGAGCAACCACTTT CAGCCTTGCATGACGGAGAGTGGCTGCAAGATAAAGATCTCCCAATCAAA ATAAGGAAGACGCGAATGACCTGATGGAACAGAAAGCCAACCTCGAGAAA AGCAAGAAGGACGCCGAGGAACTTGCTATCCAAAAGGAAAAGCAAAGAGA CAGCAAAATTCGGACCATTGGCAACATTGTTCATGATTCTGTTCCCGTGA GCAACAATGAAATGCAGATTAACTCCCAGCTCAATGCCCTTCAAAAGGAG ATTGGCAAGAGAAAGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0006418 | tRNA aminoacylation for protein translation |
GO:0006434 | seryl-tRNA aminoacylation |
Vocabulary: Molecular Function
Term | Definition |
GO:0004812 | aminoacyl-tRNA ligase activity |
GO:0000166 | nucleotide binding |
GO:0005524 | ATP binding |
GO:0004828 | serine-tRNA ligase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_006968-T2.utr3p1 | KJC3_006968-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_006968-T2.utr5p1 | KJC3_006968-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR010978 |
DBxref | InterPro:IPR033729 |
DBxref | InterPro:IPR006195 |
DBxref | InterPro:IPR002314 |
DBxref | InterPro:IPR042103 |
DBxref | InterPro:IPR002317 |
DBxref | PFAM:PF00587 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch5 | supercontig | ch5:995182..997341 - |
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