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KJC3_006989-T1, KJC3_006989-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006989-T1
Unique NameKJC3_006989-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1131870..1133795-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006989-T1 ID=KJC3_006989-T1|Name=KJC3_006989-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1926bp|location=Sequence derived from alignment at ch5:1131870..1133795- (Aspergillus niger KJC3)
AATGTGCGTCCTCCCCTTTAGACATGGAAGGTGCGTCACGTCATTGAAAC
TGCTCGCTGCCAGAACTTCCGGCGTTATCCCGGTCGTAGAAGCAACTGTA
TGTGCTCCGCTGCAATGCTAATTATCAACTGCTGATGCGACTTAGGCTGC
TTCTGAATCGTTTGTGAGCCGGTGCCGTCGCTCAGTGCTTGTTTTCAGGT
CATGGATGCGGCGAGAGTACATCGTTATATGAGAATTAGCCCAGAATGGA
CGGAAACCAAAGGCCAGATCAGACCGACTTTAGTAGTTCTGGTAAGTCTC
CTAAGGCACATACTGTGGGAGATACATATATCTCTCTATCTGTCTTGGCC
GGTCCTACTCCCAGCCTGCTTCGCTCCGCACAGCACAATTTCGTTCTCTA
CTAACGTAAAGATATATCCGTAGGGGCTGAATATATATATCCTCTAATAT
TCGATATTCCTGAATCTGTTTTGCGGGCAGAGCTTTCCCGACGGAGTTAT
ACTCGAGCTTCTAACGATGACACCTCGACTTGCGGATCAAGGGAGCGAGG
CGCCTATAACACGCCGATACATGTCTTTGCACTGTTTCTTATTCTTGTCC
TTAGCACGCTAGGTACAATTCACTTTCTGTTTGGCGTCTTGGGTGATTGG
CTGCTAACTCATGGTTGTATTAGCGTGCTCATTCCCCGTTCTTGCTCGTC
GGTTCCCGCGCCTCCCAATTCCACGCCGGTTCCTTTTCATTTCTAGACAC
TTCGGAACAGGCGTACTTATTGCAACAGCTTTCGTACACCTCCTACCTAC
AGCATTTGTCTCATTGACCGACCCTTGTCTTCCTCGTTTCTGGAGCGAGA
CCTACCGTGCCATGGCCGGCTTCGTGGCTATGATCGCTGTATTTGTTGTA
GTCCTCGTTGAGATGTTCTTTGCATTGAAAGGTGCAGGTCATGTCCATGG
GAGCGAATACGACCAGTTAATCAGCGACGTCGGTGCAGATTTCGCAAGTG
ACGATCAAGACGAAGACACTGATTACGGAACCGGATTGGCCGACAATGTC
CACCTTGACAGCCTTGGGGAAGACATGACTCTACGCTCTCCCGCGTCACT
TGGAAGATCCCCAGCTAATGGGCCTTCAAGGCCAACTAATAAGGACTCGG
CTGTGCCAACCGAACTCAACGACAGGGAGTTTGGAGAGTCACATACCTTT
GAAGATACTCGCATTAATGCCCAGAAGAATCGGGATGAGCAGCCGTGGCA
TTCTGATCGCCGTCGGTCTCATGGTAGCGTACATCAAGGGACCGATATCG
AGTCATCCAGGCAGAATCCGCAACGCCAATTGCTTCAATGCTTGTTGCTC
GAGGCCGGAATTCTCTTCCACAGTATTTTCATCGGAATGGCTCTCAGTGT
TGCCACGGGTACATCATTCATCGTCCTTCTTGTGGCTATCTGCTTTCACC
AGACCTTTGAAGGATTTGCTCTCGGATCACGGATAGCGTCTCTGATCCCT
GATCTCTTTCCCCCGTCATCGTACAGACCGTGGCTCATGGCGCTTGCCTA
TGGAACTACTACCCCCATAGGGCAAGCTATGGGACTTGTTCTGCATAATC
TTTATGATCCAGCAAGTACCACGGGCTTACTTACAGTGGGGATTACTAAC
GCCATCAGTAGCGGGCTATTATTATTTGCGGGGCTTGTTGAACTTCTAGC
AGAGGATTTCCTTAGTGAATCAAGCTATGCGACGCTCAGGGGTCAACGGC
GTGTCGAGGCTTGTGTAGCCGTTGCAGGAGGCGCTCTACTCATGGCATTT
GTTGGGGCATTTGCCTGAACATCTCCCACCTTTTTCCTGTTGATGAGGCG
ATGTAGCCAGTATATCCTAAAAATGCCATCAAGATCACGACTTAATCAAG
AGCTAATAGCTAAGATATTTGGGTGC
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Coding sequence (CDS) from alignment at ch5:1131870..1133795-

>KJC3_006989-T1 ID=KJC3_006989-T1|Name=KJC3_006989-T1|organism=Aspergillus niger KJC3|type=CDS|length=4140bp|location=Sequence derived from alignment at ch5:1131870..1133795- (Aspergillus niger KJC3)
CGTGCTCATTCCCCGTTCTTGCTCGTCGGTTCCCGCGCCTCCCAATTCCA
CGCCGGTTCCTTTTCATTTCTAGACACTTCGGAACAGGCGTACTTATTGC
AACAGCTTTCGTACACCTCCTACCTACAGCATTTGTCTCATTGACCGACC
CTTGTCTTCCTCGTTTCTGGAGCGAGACCTACCGTGCCATGGCCGGCTTC
GTGGCTATGATCGCTGTATTTGTTGTAGTCCTCGTTGAGATGTTCTTTGC
ATTGAAAGGTGCAGGTCATGTCCATGGGAGCGAATACGACCAGTTAATCA
GCGACGTCGGTGCAGATTTCGCAAGTGACGATCAAGACGAAGACACTGAT
TACGGAACCGGATTGGCCGACAATGTCCACCTTGACAGCCTTGGGGAAGA
CATGACTCTACGCTCTCCCGCGTCACTTGGAAGATCCCCAGCTAATGGGC
CTTCAAGGCCAACTAATAAGGACTCGGCTGTGCCAACCGAACTCAACGAC
AGGGAGTTTGGAGAGTCACATACCTTTGAAGATACTCGCATTAATGCCCA
GAAGAATCGGGATGAGCAGCCGTGGCATTCTGATCGCCGTCGGTCTCATG
GTAGCGTACATCAAGGGACCGATATCGAGTCATCCAGGCAGAATCCGCAA
CGCCAATTGCTTCAATGCTTGTTGCTCGAGGCCGGAATTCTCTTCCACAG
TATTTTCATCGGAATGGCTCTCAGTGTTGCCACGGGTACATCATTCATCG
TCCTTCTTGTGGCTATCTGCTTTCACCAGACCTTTGAAGGATTTGCTCTC
GGATCACGGATAGCGTCTCTGATCCCTGATCTCTTTCCCCCGTCATCGTA
CAGACCGTGGCTCATGGCGCTTGCCTATGGAACTACTACCCCCATAGGGC
AAGCTATGGGACTTGTTCTGCATAATCTTTATGATCCAGCAAGTACCACG
GGCTTACTTACAGTGGGGATTACTAACGCCATCAGTAGCGGGCTATTATT
ATTTGCGGGGCTTGTTGAACTTCTAGCAGAGGATTTCCTTAGTGAATCAA
GCTATGCGACGCTCAGGGGTCAACGGCGTGTCGAGGCTTGTGTAGCCGTT
GCAGGAGGCGCTCTACTCATGGCATTTGTTGGGGCATTTGCCTGAGGGCT
GAATATATATATCCTCTAATATTCGATATTCCTGAATCTGTTTTGCGGGC
AGAGCTTTCCCGACGGAGTTATACTCGAGCTTCTAACGATGACACCTCGA
CTTGCGGATCAAGGGAGCGAGGCGCCTATAACACGCCGATACATGTCTTT
GCACTGTTTCTTATTCTTGTCCTTAGCACGCTAGATGGACGGAAACCAAA
GGCCAGATCAGACCGACTTTAGTAGTTCTGCGTGCTCATTCCCCGTTCTT
GCTCGTCGGTTCCCGCGCCTCCCAATTCCACGCCGGTTCCTTTTCATTTC
TAGACACTTCGGAACAGGCGTACTTATTGCAACAGCTTTCGTACACCTCC
TACCTACAGCATTTGTCTCATTGACCGACCCTTGTCTTCCTCGTTTCTGG
AGCGAGACCTACCGTGCCATGGCCGGCTTCGTGGCTATGATCGCTGTATT
TGTTGTAGTCCTCGTTGAGATGTTCTTTGCATTGAAAGGTGCAGGTCATG
TCCATGGGAGCGAATACGACCAGTTAATCAGCGACGTCGGTGCAGATTTC
GCAAGTGACGATCAAGACGAAGACACTGATTACGGAACCGGATTGGCCGA
CAATGTCCACCTTGACAGCCTTGGGGAAGACATGACTCTACGCTCTCCCG
CGTCACTTGGAAGATCCCCAGCTAATGGGCCTTCAAGGCCAACTAATAAG
GACTCGGCTGTGCCAACCGAACTCAACGACAGGGAGTTTGGAGAGTCACA
TACCTTTGAAGATACTCGCATTAATGCCCAGAAGAATCGGGATGAGCAGC
CGTGGCATTCTGATCGCCGTCGGTCTCATGGTAGCGTACATCAAGGGACC
GATATCGAGTCATCCAGGCAGAATCCGCAACGCCAATTGCTTCAATGCTT
GTTGCTCGAGGCCGGAATTCTCTTCCACAGTATTTTCATCGGAATGGCTC
TCAGTGTTGCCACGGGTACATCATTCATCGTCCTTCTTGTGGCTATCTGC
TTTCACCAGACCTTTGAAGGATTTGCTCTCGGATCACGGATAGCGTCTCT
GATCCCTGATCTCTTTCCCCCGTCATCGTACAGACCGTGGCTCATGGCGC
TTGCCTATGGAACTACTACCCCCATAGGGCAAGCTATGGGACTTGTTCTG
CATAATCTTTATGATCCAGCAAGTACCACGGGCTTACTTACAGTGGGGAT
TACTAACGCCATCAGTAGCGGGCTATTATTATTTGCGGGGCTTGTTGAAC
TTCTAGCAGAGGATTTCCTTAGTGAATCAAGCTATGCGACGCTCAGGGGT
CAACGGCGTGTCGAGGCTTGTGTAGCCGTTGCAGGAGGCGCTCTACTCAT
GGCATTTGTTGGGGCATTTGCCTGAGGGCTGAATATATATATCCTCTAAT
ATTCGATATTCCTGAATCTGTTTTGCGGGCAGAGCTTTCCCGACGGAGTT
ATACTCGAGCTTCTAACGATGACACCTCGACTTGCGGATCAAGGGAGCGA
GGCGCCTATAACACGCCGATACATGTCTTTGCACTGTTTCTTATTCTTGT
CCTTAGCACGCTAGATGGACGGAAACCAAAGGCCAGATCAGACCGACTTT
AGTAGTTCTGCGTGCTCATTCCCCGTTCTTGCTCGTCGGTTCCCGCGCCT
CCCAATTCCACGCCGGTTCCTTTTCATTTCTAGACACTTCGGAACAGGCG
TACTTATTGCAACAGCTTTCGTACACCTCCTACCTACAGCATTTGTCTCA
TTGACCGACCCTTGTCTTCCTCGTTTCTGGAGCGAGACCTACCGTGCCAT
GGCCGGCTTCGTGGCTATGATCGCTGTATTTGTTGTAGTCCTCGTTGAGA
TGTTCTTTGCATTGAAAGGTGCAGGTCATGTCCATGGGAGCGAATACGAC
CAGTTAATCAGCGACGTCGGTGCAGATTTCGCAAGTGACGATCAAGACGA
AGACACTGATTACGGAACCGGATTGGCCGACAATGTCCACCTTGACAGCC
TTGGGGAAGACATGACTCTACGCTCTCCCGCGTCACTTGGAAGATCCCCA
GCTAATGGGCCTTCAAGGCCAACTAATAAGGACTCGGCTGTGCCAACCGA
ACTCAACGACAGGGAGTTTGGAGAGTCACATACCTTTGAAGATACTCGCA
TTAATGCCCAGAAGAATCGGGATGAGCAGCCGTGGCATTCTGATCGCCGT
CGGTCTCATGGTAGCGTACATCAAGGGACCGATATCGAGTCATCCAGGCA
GAATCCGCAACGCCAATTGCTTCAATGCTTGTTGCTCGAGGCCGGAATTC
TCTTCCACAGTATTTTCATCGGAATGGCTCTCAGTGTTGCCACGGGTACA
TCATTCATCGTCCTTCTTGTGGCTATCTGCTTTCACCAGACCTTTGAAGG
ATTTGCTCTCGGATCACGGATAGCGTCTCTGATCCCTGATCTCTTTCCCC
CGTCATCGTACAGACCGTGGCTCATGGCGCTTGCCTATGGAACTACTACC
CCCATAGGGCAAGCTATGGGACTTGTTCTGCATAATCTTTATGATCCAGC
AAGTACCACGGGCTTACTTACAGTGGGGATTACTAACGCCATCAGTAGCG
GGCTATTATTATTTGCGGGGCTTGTTGAACTTCTAGCAGAGGATTTCCTT
AGTGAATCAAGCTATGCGACGCTCAGGGGTCAACGGCGTGTCGAGGCTTG
TGTAGCCGTTGCAGGAGGCGCTCTACTCATGGCATTTGTTGGGGCATTTG
CCTGAGGGCTGAATATATATATCCTCTAATATTCGATATTCCTGAATCTG
TTTTGCGGGCAGAGCTTTCCCGACGGAGTTATACTCGAGCTTCTAACGAT
GACACCTCGACTTGCGGATCAAGGGAGCGAGGCGCCTATAACACGCCGAT
ACATGTCTTTGCACTGTTTCTTATTCTTGTCCTTAGCACGCTAGATGGAC
GGAAACCAAAGGCCAGATCAGACCGACTTTAGTAGTTCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0046873metal ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006989KJC3_006989Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006989-T1KJC3_006989-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006989-T1.cdsKJC3_006989-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006989-T1.utr3p1KJC3_006989-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006989-T1.exon4KJC3_006989-T1.exon4Aspergillus niger KJC3exon
KJC3_006989-T1.exon3KJC3_006989-T1.exon3Aspergillus niger KJC3exon
KJC3_006989-T1.exon2KJC3_006989-T1.exon2Aspergillus niger KJC3exon
KJC3_006989-T1.exon1KJC3_006989-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006989-T1.utr5p2KJC3_006989-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_006989-T1.utr5p1KJC3_006989-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR003689
DBxrefPFAM:PF02535
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1131870..1133795 -
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