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KJC3_007013-T1, KJC3_007013-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007013-T1
Unique NameKJC3_007013-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1210354..1213191-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007013-T1 ID=KJC3_007013-T1|Name=KJC3_007013-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2838bp|location=Sequence derived from alignment at ch5:1210354..1213191- (Aspergillus niger KJC3)
GTTCAACACGCAGCCATGCCGCCTTCGCAGCTTAAACAGCTCAAGGCTTC
CCTCCGCGAGGGTGGAGTCTTGGGGCCCCAGCAGTCCAAGAAGCAAAAGC
GTCAGAATGCGAAGACTGGTGTGTCCGCGCAAAATCGCATGAAGCGGGAA
TCCGCTCTGCAGGCGATTCGCGATCGTTTCAACCCGTTCGAGATCAAGGC
CACTTCGCGCCCCAAGTTCGATGTGACCACGCGCGATGTCGGACCTAAGT
CGAAACATGGCCATGCGAGGCCCGGTGTGACCAAGTCTCTTGGTGAAGAA
AAGGTGAGCTAGGTTGGACATTCTTCGACACGGGGTGTCACTGACAAGGT
ACTTCCTCTACAGAGACGCCATACGCTTTTGCGCGAAATGGACCGCAAGA
ACAAAGTTGGTGGAATCCTCGATCGCCGGTTCGGTGAGGATGATCCGACA
ATGACGCCGGAAGAAAGGGCTGCCGAGCGATTCGCCCGTGAGAGTCAGAA
GAAACTGCGCAAGGAGTCGATGTTCAACTTGGAGGACGACGAGGAAGAGT
TCCAGCTCACACATCAAGGCCAGTCTCTGTCATTTGGAGAGGGAATGCTC
GGAGATGACTTCCGCGAAGGCGATTTGGACATGGACGAAGAATCGGATTC
GGAACTGCCTCGCAAGAGGAAGCGAGAGTTTGCCGACGATGAGGAGGCTC
TAGATGACGATATCGTATTTGACGATGAGGAAGGGGAAGAGCAGCCAGAG
CGCAAGAAGTCGAAGCACGAAGTCATGAAAGAAGTCATCGCCAAGTCCAA
GTTCTACAAAGCCGAACGACAGAAAGCTAAGGAAGACGATGACGATCTTC
GAGAGGAGCTCGACAAAGGTCTTCCCGATCTCTTCGACATGTTGAGAGGC
GTGAAGCCTCCCCCGAAACCGGAGCCTCCAAAGGACGATTTCGCCTCAAT
GGACCCCGCTCGTGCAGCACTGCTGGCCGGAAAGTCACAGAACGAGACCG
AGCAGGAGTATGACCAACGCTTGAAGCAGTTGACCTTCGATAAGAGGTCT
CAACCGACGGACCGTACGAAGACGGCAGAGGAGAAGGCGGCGGAAGAGGC
CGAGCGGCTGAAGAAGCTGGAAGAAGAGCGTGTTCGACGAATGCGCGGTG
AGGAGCCAAGCGAGGACGAAGAGGAGGAGGATGAAGAGGAAAGTGACGAG
GAAGGCAGTGAGGACGACGACGAGGAGTCGTTACCGGACGATGCCAAAGC
GTTCGGTTTGCAGCAGCCCACGGCCGAGACGAGCACTCGTCCCGAACTGG
GTGTCGAAGATGAGGACGATTTCATTATCGACGATGACCTTGTGGAAACG
AGGTCTAATGCCAGTCTCTCCTTCGATGAAAGCGACCTGGAGATGGAATC
CGCGGAGGAGTCCGACGAGGAGCCTGAAGACGACCAGGAGGACGAGTTGA
TCAATGGCTTCACGCTCCCTGAGAGCAAGTCCGGCGATGCCTCGACAGCT
CCCAACAGCACCGAAGAGCCAACTGACGGTCTGGCATACACATACCCCTG
CCCTGGCAGCCATGACGAGTTCCTGGAGATCATCAAGGACGTGTCTATGC
AGGACCTCCCCGTCGTCGTCCAGAGGATTCGTGCCCTGCACCATCCCCGT
CTTCACCCCGACAACAAGATGAAGCTCGGCCGTTTCGCGGGCATCCTCGT
CGAGCACGTTGCATACATGGCCGATCTACCGGAACATCCTCCCTTTGCCA
TTGTGGAAAACATCCTCCGTCACATCCACTCCCTGGCGAAGACTCACCCC
GACACCGTCTGCCAGGCATATCGCGCCCATCTCCGCCAGATTGCCACGGA
GCGTCCGCTCAATCTCCGTGCTGGTGACCTCGTCATCCTCACCGGCATTG
CCACCACCTTCCCAACCTCCGACCACTTCCACGCTATCGCAACCCCGGCA
CACCTCTGCATCTCGCGCTACCTGGGCCAGGGCGTCGTCAACTCCCTCGC
CGACGCGTCCGCCGGCACTTACGCAGCCAGCTTACTCCTGCAATACCAGT
TCATCTCCAAGCGCTACATGCCGGAATTCATCAACTACACCCTCAACATG
CTGTGCCACCTCAGCCCGAAAGAGCCCAGCGAGAGTCTCGGGTCCTTCCC
CCTCCGGAGCCCGCAAACCTCTCTGCGTCTGAACCTCTCTTCTTCCAAGA
CTACCATCTCCCCCCGCAAGCTTCGCTTCTGGGACACGACCGACCAAACC
CACTCCAACCCCGAAGAGGTCAAACTATCCCTGCTCACCACCCTCGTCAC
CCTCCTCGGCACCGCCTCCGACCTCTGGACCAGCAAATCCGCCTACACCG
AAATCTTCACTCCAGTCCAGAACGTCCTTAACCACCTCCGCAGCAGCCTC
AAGGGCAACAAGAAACTCATCTCCTCTCAAGTGCGGGACACCATTCAATC
CACCCTGGACAAGGTTACCACCCAACTCTCTCAAGCCAAACTCACCCGTC
GACCCCTCCTCCTGCACAACCACCGGCCCTTGGCCATCAAAACCGCCATC
CCCAAGTTCGAAGAGACCTTCAACCCGGACAAGCACTACGACCCGGACCG
CGAGCGCGCCGAAAGCAACCGTCTCAAGGCGGAATACAAGCGCGAGCGCA
AGGGAGCGATGCGCGAGCTCCGCAAGGACGCCAACTTCATTGCGCGCGAG
AAGCTCCGCGAGAAGAAGGAGCGCGATGCCGAGTACGAGCGCAAGTACAA
GCGGCTTGTGGCGGAGGTGCAGAACGAGGAGGGTCGCGAGGCGAATGCTT
ACGAAAGGGAGAAGAGAATGCGGCAGGGCAAGCGGTGA
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Coding sequence (CDS) from alignment at ch5:1210354..1213191-

>KJC3_007013-T1 ID=KJC3_007013-T1|Name=KJC3_007013-T1|organism=Aspergillus niger KJC3|type=CDS|length=5526bp|location=Sequence derived from alignment at ch5:1210354..1213191- (Aspergillus niger KJC3)
AGACGCCATACGCTTTTGCGCGAAATGGACCGCAAGAACAAAGTTGGTGG
AATCCTCGATCGCCGGTTCGGTGAGGATGATCCGACAATGACGCCGGAAG
AAAGGGCTGCCGAGCGATTCGCCCGTGAGAGTCAGAAGAAACTGCGCAAG
GAGTCGATGTTCAACTTGGAGGACGACGAGGAAGAGTTCCAGCTCACACA
TCAAGGCCAGTCTCTGTCATTTGGAGAGGGAATGCTCGGAGATGACTTCC
GCGAAGGCGATTTGGACATGGACGAAGAATCGGATTCGGAACTGCCTCGC
AAGAGGAAGCGAGAGTTTGCCGACGATGAGGAGGCTCTAGATGACGATAT
CGTATTTGACGATGAGGAAGGGGAAGAGCAGCCAGAGCGCAAGAAGTCGA
AGCACGAAGTCATGAAAGAAGTCATCGCCAAGTCCAAGTTCTACAAAGCC
GAACGACAGAAAGCTAAGGAAGACGATGACGATCTTCGAGAGGAGCTCGA
CAAAGGTCTTCCCGATCTCTTCGACATGTTGAGAGGCGTGAAGCCTCCCC
CGAAACCGGAGCCTCCAAAGGACGATTTCGCCTCAATGGACCCCGCTCGT
GCAGCACTGCTGGCCGGAAAGTCACAGAACGAGACCGAGCAGGAGTATGA
CCAACGCTTGAAGCAGTTGACCTTCGATAAGAGGTCTCAACCGACGGACC
GTACGAAGACGGCAGAGGAGAAGGCGGCGGAAGAGGCCGAGCGGCTGAAG
AAGCTGGAAGAAGAGCGTGTTCGACGAATGCGCGGTGAGGAGCCAAGCGA
GGACGAAGAGGAGGAGGATGAAGAGGAAAGTGACGAGGAAGGCAGTGAGG
ACGACGACGAGGAGTCGTTACCGGACGATGCCAAAGCGTTCGGTTTGCAG
CAGCCCACGGCCGAGACGAGCACTCGTCCCGAACTGGGTGTCGAAGATGA
GGACGATTTCATTATCGACGATGACCTTGTGGAAACGAGGTCTAATGCCA
GTCTCTCCTTCGATGAAAGCGACCTGGAGATGGAATCCGCGGAGGAGTCC
GACGAGGAGCCTGAAGACGACCAGGAGGACGAGTTGATCAATGGCTTCAC
GCTCCCTGAGAGCAAGTCCGGCGATGCCTCGACAGCTCCCAACAGCACCG
AAGAGCCAACTGACGGTCTGGCATACACATACCCCTGCCCTGGCAGCCAT
GACGAGTTCCTGGAGATCATCAAGGACGTGTCTATGCAGGACCTCCCCGT
CGTCGTCCAGAGGATTCGTGCCCTGCACCATCCCCGTCTTCACCCCGACA
ACAAGATGAAGCTCGGCCGTTTCGCGGGCATCCTCGTCGAGCACGTTGCA
TACATGGCCGATCTACCGGAACATCCTCCCTTTGCCATTGTGGAAAACAT
CCTCCGTCACATCCACTCCCTGGCGAAGACTCACCCCGACACCGTCTGCC
AGGCATATCGCGCCCATCTCCGCCAGATTGCCACGGAGCGTCCGCTCAAT
CTCCGTGCTGGTGACCTCGTCATCCTCACCGGCATTGCCACCACCTTCCC
AACCTCCGACCACTTCCACGCTATCGCAACCCCGGCACACCTCTGCATCT
CGCGCTACCTGGGCCAGGGCGTCGTCAACTCCCTCGCCGACGCGTCCGCC
GGCACTTACGCAGCCAGCTTACTCCTGCAATACCAGTTCATCTCCAAGCG
CTACATGCCGGAATTCATCAACTACACCCTCAACATGCTGTGCCACCTCA
GCCCGAAAGAGCCCAGCGAGAGTCTCGGGTCCTTCCCCCTCCGGAGCCCG
CAAACCTCTCTGCGTCTGAACCTCTCTTCTTCCAAGACTACCATCTCCCC
CCGCAAGCTTCGCTTCTGGGACACGACCGACCAAACCCACTCCAACCCCG
AAGAGGTCAAACTATCCCTGCTCACCACCCTCGTCACCCTCCTCGGCACC
GCCTCCGACCTCTGGACCAGCAAATCCGCCTACACCGAAATCTTCACTCC
AGTCCAGAACGTCCTTAACCACCTCCGCAGCAGCCTCAAGGGCAACAAGA
AACTCATCTCCTCTCAAGTGCGGGACACCATTCAATCCACCCTGGACAAG
GTTACCACCCAACTCTCTCAAGCCAAACTCACCCGTCGACCCCTCCTCCT
GCACAACCACCGGCCCTTGGCCATCAAAACCGCCATCCCCAAGTTCGAAG
AGACCTTCAACCCGGACAAGCACTACGACCCGGACCGCGAGCGCGCCGAA
AGCAACCGTCTCAAGGCGGAATACAAGCGCGAGCGCAAGGGAGCGATGCG
CGAGCTCCGCAAGGACGCCAACTTCATTGCGCGCGAGAAGCTCCGCGAGA
AGAAGGAGCGCGATGCCGAGTACGAGCGCAAGTACAAGCGGCTTGTGGCG
GAGGTGCAGAACGAGGAGGGTCGCGAGGCGAATGCTTACGAAAGGGAGAA
GAGAATGCGGCAGGGCAAGCGGTGAATGCCGCCTTCGCAGCTTAAACAGC
TCAAGGCTTCCCTCCGCGAGGGTGGAGTCTTGGGGCCCCAGCAGTCCAAG
AAGCAAAAGCGTCAGAATGCGAAGACTGGTGTGTCCGCGCAAAATCGCAT
GAAGCGGGAATCCGCTCTGCAGGCGATTCGCGATCGTTTCAACCCGTTCG
AGATCAAGGCCACTTCGCGCCCCAAGTTCGATGTGACCACGCGCGATGTC
GGACCTAAGTCGAAACATGGCCATGCGAGGCCCGGTGTGACCAAGTCTCT
TGGTGAAGAAAAGAGACGCCATACGCTTTTGCGCGAAATGGACCGCAAGA
ACAAAGTTGGTGGAATCCTCGATCGCCGGTTCGGTGAGGATGATCCGACA
ATGACGCCGGAAGAAAGGGCTGCCGAGCGATTCGCCCGTGAGAGTCAGAA
GAAACTGCGCAAGGAGTCGATGTTCAACTTGGAGGACGACGAGGAAGAGT
TCCAGCTCACACATCAAGGCCAGTCTCTGTCATTTGGAGAGGGAATGCTC
GGAGATGACTTCCGCGAAGGCGATTTGGACATGGACGAAGAATCGGATTC
GGAACTGCCTCGCAAGAGGAAGCGAGAGTTTGCCGACGATGAGGAGGCTC
TAGATGACGATATCGTATTTGACGATGAGGAAGGGGAAGAGCAGCCAGAG
CGCAAGAAGTCGAAGCACGAAGTCATGAAAGAAGTCATCGCCAAGTCCAA
GTTCTACAAAGCCGAACGACAGAAAGCTAAGGAAGACGATGACGATCTTC
GAGAGGAGCTCGACAAAGGTCTTCCCGATCTCTTCGACATGTTGAGAGGC
GTGAAGCCTCCCCCGAAACCGGAGCCTCCAAAGGACGATTTCGCCTCAAT
GGACCCCGCTCGTGCAGCACTGCTGGCCGGAAAGTCACAGAACGAGACCG
AGCAGGAGTATGACCAACGCTTGAAGCAGTTGACCTTCGATAAGAGGTCT
CAACCGACGGACCGTACGAAGACGGCAGAGGAGAAGGCGGCGGAAGAGGC
CGAGCGGCTGAAGAAGCTGGAAGAAGAGCGTGTTCGACGAATGCGCGGTG
AGGAGCCAAGCGAGGACGAAGAGGAGGAGGATGAAGAGGAAAGTGACGAG
GAAGGCAGTGAGGACGACGACGAGGAGTCGTTACCGGACGATGCCAAAGC
GTTCGGTTTGCAGCAGCCCACGGCCGAGACGAGCACTCGTCCCGAACTGG
GTGTCGAAGATGAGGACGATTTCATTATCGACGATGACCTTGTGGAAACG
AGGTCTAATGCCAGTCTCTCCTTCGATGAAAGCGACCTGGAGATGGAATC
CGCGGAGGAGTCCGACGAGGAGCCTGAAGACGACCAGGAGGACGAGTTGA
TCAATGGCTTCACGCTCCCTGAGAGCAAGTCCGGCGATGCCTCGACAGCT
CCCAACAGCACCGAAGAGCCAACTGACGGTCTGGCATACACATACCCCTG
CCCTGGCAGCCATGACGAGTTCCTGGAGATCATCAAGGACGTGTCTATGC
AGGACCTCCCCGTCGTCGTCCAGAGGATTCGTGCCCTGCACCATCCCCGT
CTTCACCCCGACAACAAGATGAAGCTCGGCCGTTTCGCGGGCATCCTCGT
CGAGCACGTTGCATACATGGCCGATCTACCGGAACATCCTCCCTTTGCCA
TTGTGGAAAACATCCTCCGTCACATCCACTCCCTGGCGAAGACTCACCCC
GACACCGTCTGCCAGGCATATCGCGCCCATCTCCGCCAGATTGCCACGGA
GCGTCCGCTCAATCTCCGTGCTGGTGACCTCGTCATCCTCACCGGCATTG
CCACCACCTTCCCAACCTCCGACCACTTCCACGCTATCGCAACCCCGGCA
CACCTCTGCATCTCGCGCTACCTGGGCCAGGGCGTCGTCAACTCCCTCGC
CGACGCGTCCGCCGGCACTTACGCAGCCAGCTTACTCCTGCAATACCAGT
TCATCTCCAAGCGCTACATGCCGGAATTCATCAACTACACCCTCAACATG
CTGTGCCACCTCAGCCCGAAAGAGCCCAGCGAGAGTCTCGGGTCCTTCCC
CCTCCGGAGCCCGCAAACCTCTCTGCGTCTGAACCTCTCTTCTTCCAAGA
CTACCATCTCCCCCCGCAAGCTTCGCTTCTGGGACACGACCGACCAAACC
CACTCCAACCCCGAAGAGGTCAAACTATCCCTGCTCACCACCCTCGTCAC
CCTCCTCGGCACCGCCTCCGACCTCTGGACCAGCAAATCCGCCTACACCG
AAATCTTCACTCCAGTCCAGAACGTCCTTAACCACCTCCGCAGCAGCCTC
AAGGGCAACAAGAAACTCATCTCCTCTCAAGTGCGGGACACCATTCAATC
CACCCTGGACAAGGTTACCACCCAACTCTCTCAAGCCAAACTCACCCGTC
GACCCCTCCTCCTGCACAACCACCGGCCCTTGGCCATCAAAACCGCCATC
CCCAAGTTCGAAGAGACCTTCAACCCGGACAAGCACTACGACCCGGACCG
CGAGCGCGCCGAAAGCAACCGTCTCAAGGCGGAATACAAGCGCGAGCGCA
AGGGAGCGATGCGCGAGCTCCGCAAGGACGCCAACTTCATTGCGCGCGAG
AAGCTCCGCGAGAAGAAGGAGCGCGATGCCGAGTACGAGCGCAAGTACAA
GCGGCTTGTGGCGGAGGTGCAGAACGAGGAGGGTCGCGAGGCGAATGCTT
ACGAAAGGGAGAAGAGAATGCGGCAGGGCAAGCGGTGAATGCCGCCTTCG
CAGCTTAAACAGCTCAAGGCTTCCCTCCGCGAGGGTGGAGTCTTGGGGCC
CCAGCAGTCCAAGAAGCAAAAGCGTCAGAATGCGAAGACTGGTGTGTCCG
CGCAAAATCGCATGAAGCGGGAATCCGCTCTGCAGGCGATTCGCGATCGT
TTCAACCCGTTCGAGATCAAGGCCACTTCGCGCCCCAAGTTCGATGTGAC
CACGCGCGATGTCGGACCTAAGTCGAAACATGGCCATGCGAGGCCCGGTG
TGACCAAGTCTCTTGGTGAAGAAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0032040small-subunit processome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007013KJC3_007013Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007013-T1KJC3_007013-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007013-T1.cdsKJC3_007013-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007013-T1.exon2KJC3_007013-T1.exon2Aspergillus niger KJC3exon
KJC3_007013-T1.exon1KJC3_007013-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007013-T1.utr5p1KJC3_007013-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092620IA
DBxrefInterPro:IPR007276
DBxrefPFAM:PF04147
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1210354..1213191 -
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