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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1536110..1537914+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007130-T1 ID=KJC3_007130-T1|Name=KJC3_007130-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1805bp|location=Sequence derived from alignment at ch5:1536110..1537914+ (Aspergillus niger KJC3)
CTCGCTCTACTCTTCGTCTTTCACGGTTCCTCCTCGGCCTGCGCTTTGCT
GCTGCTCGCCGCCAATCCCTACTCATGGACTCGCCAGTCCTGAATCAGCT
GTTTCGGCAGCTGTTTCAACATCCTGCCTGTCGACAATCCTGGAGATCCT
CATCTGCCCTGTCGGGGCGCCGACCGGGTTGCGTGCGCCTGTCGTCCACC
CCATCCCGCCAACAGTCTCGCAACCTTAGTTTCCAAAGTTTCAAGCAACG
CATCTTTGGACATTCAAAACTAGATCCTGGAACACTATGGACTCCGCGAG
AACATGTCATGCAAAATGTCGACAACTTCGAAGAGCAATTGCAGGCCTAC
CCATTGGTAACGGCCAAAGAGCTCCGCCATCATCGTGAGCGGCCGCGACA
AGTGAAGATGCTGACGAGAGAATTCATCGATGGTTGGGAAGCCTATCCAC
TGTGTGTTTGATGGTCGCTGGCGCTAATGATGTTGTCTCATCTCTTTTCT
TAGACAGTTTATACAATCACAATTATGGCTACTTCTCGAAACATGCCACC
ATTTTCCGCCCCGGAGAGCCATTCTATTTCAACGAGATCGAGGACGGTCC
AGCATTTTATCGCATGCTTGGGGAACGTTACCACGAATTTGAAGACCAGC
TGGATGAAACCAATCCAGATGTTGCTCGCCAGTTGTGGCACACGCCAACG
GAGCTTTTCCGACCTTATTACGGAGAGACGATCGCACGGTACTTGGTGTC
GAACTACAAGTTGACGTTGTACCCCTACCACGACCTGATTATATACGAAA
TGGGTGCCGGAAATGGAACAATGATGATGAACATATTGGATTATATCCGC
GACACCGACTACGAGGTCTACCAGCGGACCAAGTACAAGATCATTGAGAT
TTCGCCGTCGCTGGCATCGCTTCAGATGCAAAACTTGACCGATTCGCTCG
ATGCGGCCGGCCATTCGGACCGTGTGGAGATTATCAACCGCTCGATTTTC
GACTGGGATACTTATGTGCATTCGCCGTGCTTCTTCCTGGCGCTGGAGGT
GTTCGATAACTTTTCCCATGATCAGATTCGCTACGACCTCAAGACGGAGC
TGCCTCAGCAGGGTGGAGTACTGATCGACGCCAACGGCGAGTTTCTCGAG
TACTACAATACGCAGCTGGATCCGATTGCTTCTCGCTTTTTGCGAGTGCG
CCAGGCTGCAGCGCGGCGGAAGTTCCGCACTCCCTTGACCTCCAAGTACA
TGAAGTTGATGCGCAGTCAGCTGCCGTGGCAGCAGGGCCATCGCTACACT
CTGCCGGAGTACATCCCCACCCGACTCATGCAATTCTTCGATATTCTGAA
CACCTATTTCCCGGGCCACCGCCTGATTGCGAGTGACTTTGACACTCTCC
CGGATGCCGTGCCGGGTGTGAATGCGCCCGTTGTGCAAACGCGGTACAAG
AGACGGACAGTTCCAGTATCGACGCCCTTCGTATGTTCCCTCCCTCACCT
TCTTCCATGTGCTAGATTGGCCGTATTCTGACTATGAATTAGGTCCACCA
AGGATACTTCGATATTTTCTTCCCTACCGATTTCAACACTACTGAAGACA
TCTACCGTGCTGTCACGGGCAAGCTGACGCAAGTGATGAGCCACGAAGAC
TTCATGCGCCGATGGGCGTATATTGAGGACACGGAGACGAAGAACGGGGA
AAATCCGCTCCTAACCTGGTATAAGAATGCCAGCATGTTGATCACAGTGT
AGGGGGCGTCTATATGTACCATAGTATCAAATATCCAAGCAAGCATATCT
CTGTA back to topCoding sequence (CDS) from alignment at ch5:1536110..1537914+ >KJC3_007130-T1 ID=KJC3_007130-T1|Name=KJC3_007130-T1|organism=Aspergillus niger KJC3|type=CDS|length=4635bp|location=Sequence derived from alignment at ch5:1536110..1537914+ (Aspergillus niger KJC3)
ATGGACTCGCCAGTCCTGAATCAGCTGTTTCGGCAGCTGTTTCAACATCC
TGCCTGTCGACAATCCTGGAGATCCTCATCTGCCCTGTCGGGGCGCCGAC
CGGGTTGCGTGCGCCTGTCGTCCACCCCATCCCGCCAACAGTCTCGCAAC
CTTAGTTTCCAAAGTTTCAAGCAACGCATCTTTGGACATTCAAAACTAGA
TCCTGGAACACTATGGACTCCGCGAGAACATGTCATGCAAAATGTCGACA
ACTTCGAAGAGCAATTGCAGGCCTACCCATTGGTAACGGCCAAAGAGCTC
CGCCATCATCGTGAGCGGCCGCGACAAGTGAAGATGCTGACGAGAGAATT
CATCGATGACAGTTTATACAATCACAATTATGGCTACTTCTCGAAACATG
CCACCATTTTCCGCCCCGGAGAGCCATTCTATTTCAACGAGATCGAGGAC
GGTCCAGCATTTTATCGCATGCTTGGGGAACGTTACCACGAATTTGAAGA
CCAGCTGGATGAAACCAATCCAGATGTTGCTCGCCAGTTGTGGCACACGC
CAACGGAGCTTTTCCGACCTTATTACGGAGAGACGATCGCACGGTACTTG
GTGTCGAACTACAAGTTGACGTTGTACCCCTACCACGACCTGATTATATA
CGAAATGGGTGCCGGAAATGGAACAATGATGATGAACATATTGGATTATA
TCCGCGACACCGACTACGAGGTCTACCAGCGGACCAAGTACAAGATCATT
GAGATTTCGCCGTCGCTGGCATCGCTTCAGATGCAAAACTTGACCGATTC
GCTCGATGCGGCCGGCCATTCGGACCGTGTGGAGATTATCAACCGCTCGA
TTTTCGACTGGGATACTTATGTGCATTCGCCGTGCTTCTTCCTGGCGCTG
GAGGTGTTCGATAACTTTTCCCATGATCAGATTCGCTACGACCTCAAGAC
GGAGCTGCCTCAGCAGGGTGGAGTACTGATCGACGCCAACGGCGAGTTTC
TCGAGTACTACAATACGCAGCTGGATCCGATTGCTTCTCGCTTTTTGCGA
GTGCGCCAGGCTGCAGCGCGGCGGAAGTTCCGCACTCCCTTGACCTCCAA
GTACATGAAGTTGATGCGCAGTCAGCTGCCGTGGCAGCAGGGCCATCGCT
ACACTCTGCCGGAGTACATCCCCACCCGACTCATGCAATTCTTCGATATT
CTGAACACCTATTTCCCGGGCCACCGCCTGATTGCGAGTGACTTTGACAC
TCTCCCGGATGCCGTGCCGGGTGTGAATGCGCCCGTTGTGCAAACGCGGT
ACAAGAGACGGACAGTTCCAGTATCGACGCCCTTCGTCCACCAAGGATAC
TTCGATATTTTCTTCCCTACCGATTTCAACACTACTGAAGACATCTACCG
TGCTGTCACGGGCAAGCTGACGCAAGTGATGAGCCACGAAGACTTCATGC
GCCGATGGGCGTATATTGAGGACACGGAGACGAAGAACGGGGAAAATCCG
CTCCTAACCTGGTATAAGAATGCCAGCATGTTGATCACAGTGTAGATGGA
CTCGCCAGTCCTGAATCAGCTGTTTCGGCAGCTGTTTCAACATCCTGCCT
GTCGACAATCCTGGAGATCCTCATCTGCCCTGTCGGGGCGCCGACCGGGT
TGCGTGCGCCTGTCGTCCACCCCATCCCGCCAACAGTCTCGCAACCTTAG
TTTCCAAAGTTTCAAGCAACGCATCTTTGGACATTCAAAACTAGATCCTG
GAACACTATGGACTCCGCGAGAACATGTCATGCAAAATGTCGACAACTTC
GAAGAGCAATTGCAGGCCTACCCATTGGTAACGGCCAAAGAGCTCCGCCA
TCATCGTGAGCGGCCGCGACAAGTGAAGATGCTGACGAGAGAATTCATCG
ATGACAGTTTATACAATCACAATTATGGCTACTTCTCGAAACATGCCACC
ATTTTCCGCCCCGGAGAGCCATTCTATTTCAACGAGATCGAGGACGGTCC
AGCATTTTATCGCATGCTTGGGGAACGTTACCACGAATTTGAAGACCAGC
TGGATGAAACCAATCCAGATGTTGCTCGCCAGTTGTGGCACACGCCAACG
GAGCTTTTCCGACCTTATTACGGAGAGACGATCGCACGGTACTTGGTGTC
GAACTACAAGTTGACGTTGTACCCCTACCACGACCTGATTATATACGAAA
TGGGTGCCGGAAATGGAACAATGATGATGAACATATTGGATTATATCCGC
GACACCGACTACGAGGTCTACCAGCGGACCAAGTACAAGATCATTGAGAT
TTCGCCGTCGCTGGCATCGCTTCAGATGCAAAACTTGACCGATTCGCTCG
ATGCGGCCGGCCATTCGGACCGTGTGGAGATTATCAACCGCTCGATTTTC
GACTGGGATACTTATGTGCATTCGCCGTGCTTCTTCCTGGCGCTGGAGGT
GTTCGATAACTTTTCCCATGATCAGATTCGCTACGACCTCAAGACGGAGC
TGCCTCAGCAGGGTGGAGTACTGATCGACGCCAACGGCGAGTTTCTCGAG
TACTACAATACGCAGCTGGATCCGATTGCTTCTCGCTTTTTGCGAGTGCG
CCAGGCTGCAGCGCGGCGGAAGTTCCGCACTCCCTTGACCTCCAAGTACA
TGAAGTTGATGCGCAGTCAGCTGCCGTGGCAGCAGGGCCATCGCTACACT
CTGCCGGAGTACATCCCCACCCGACTCATGCAATTCTTCGATATTCTGAA
CACCTATTTCCCGGGCCACCGCCTGATTGCGAGTGACTTTGACACTCTCC
CGGATGCCGTGCCGGGTGTGAATGCGCCCGTTGTGCAAACGCGGTACAAG
AGACGGACAGTTCCAGTATCGACGCCCTTCGTCCACCAAGGATACTTCGA
TATTTTCTTCCCTACCGATTTCAACACTACTGAAGACATCTACCGTGCTG
TCACGGGCAAGCTGACGCAAGTGATGAGCCACGAAGACTTCATGCGCCGA
TGGGCGTATATTGAGGACACGGAGACGAAGAACGGGGAAAATCCGCTCCT
AACCTGGTATAAGAATGCCAGCATGTTGATCACAGTGTAGATGGACTCGC
CAGTCCTGAATCAGCTGTTTCGGCAGCTGTTTCAACATCCTGCCTGTCGA
CAATCCTGGAGATCCTCATCTGCCCTGTCGGGGCGCCGACCGGGTTGCGT
GCGCCTGTCGTCCACCCCATCCCGCCAACAGTCTCGCAACCTTAGTTTCC
AAAGTTTCAAGCAACGCATCTTTGGACATTCAAAACTAGATCCTGGAACA
CTATGGACTCCGCGAGAACATGTCATGCAAAATGTCGACAACTTCGAAGA
GCAATTGCAGGCCTACCCATTGGTAACGGCCAAAGAGCTCCGCCATCATC
GTGAGCGGCCGCGACAAGTGAAGATGCTGACGAGAGAATTCATCGATGAC
AGTTTATACAATCACAATTATGGCTACTTCTCGAAACATGCCACCATTTT
CCGCCCCGGAGAGCCATTCTATTTCAACGAGATCGAGGACGGTCCAGCAT
TTTATCGCATGCTTGGGGAACGTTACCACGAATTTGAAGACCAGCTGGAT
GAAACCAATCCAGATGTTGCTCGCCAGTTGTGGCACACGCCAACGGAGCT
TTTCCGACCTTATTACGGAGAGACGATCGCACGGTACTTGGTGTCGAACT
ACAAGTTGACGTTGTACCCCTACCACGACCTGATTATATACGAAATGGGT
GCCGGAAATGGAACAATGATGATGAACATATTGGATTATATCCGCGACAC
CGACTACGAGGTCTACCAGCGGACCAAGTACAAGATCATTGAGATTTCGC
CGTCGCTGGCATCGCTTCAGATGCAAAACTTGACCGATTCGCTCGATGCG
GCCGGCCATTCGGACCGTGTGGAGATTATCAACCGCTCGATTTTCGACTG
GGATACTTATGTGCATTCGCCGTGCTTCTTCCTGGCGCTGGAGGTGTTCG
ATAACTTTTCCCATGATCAGATTCGCTACGACCTCAAGACGGAGCTGCCT
CAGCAGGGTGGAGTACTGATCGACGCCAACGGCGAGTTTCTCGAGTACTA
CAATACGCAGCTGGATCCGATTGCTTCTCGCTTTTTGCGAGTGCGCCAGG
CTGCAGCGCGGCGGAAGTTCCGCACTCCCTTGACCTCCAAGTACATGAAG
TTGATGCGCAGTCAGCTGCCGTGGCAGCAGGGCCATCGCTACACTCTGCC
GGAGTACATCCCCACCCGACTCATGCAATTCTTCGATATTCTGAACACCT
ATTTCCCGGGCCACCGCCTGATTGCGAGTGACTTTGACACTCTCCCGGAT
GCCGTGCCGGGTGTGAATGCGCCCGTTGTGCAAACGCGGTACAAGAGACG
GACAGTTCCAGTATCGACGCCCTTCGTCCACCAAGGATACTTCGATATTT
TCTTCCCTACCGATTTCAACACTACTGAAGACATCTACCGTGCTGTCACG
GGCAAGCTGACGCAAGTGATGAGCCACGAAGACTTCATGCGCCGATGGGC
GTATATTGAGGACACGGAGACGAAGAACGGGGAAAATCCGCTCCTAACCT
GGTATAAGAATGCCAGCATGTTGATCACAGTGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007130-T1.utr5p1 | KJC3_007130-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007130-T1.utr3p1 | KJC3_007130-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262DPL |
| DBxref | InterPro:IPR029063 |
| DBxref | InterPro:IPR038375 |
| DBxref | InterPro:IPR003788 |
| DBxref | PFAM:PF02636 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1536110..1537914 + |
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