You are here

Home

KJC3_007202-T1, KJC3_007202-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007202-T1
Unique NameKJC3_007202-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1798622..1799729-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007202-T1 ID=KJC3_007202-T1|Name=KJC3_007202-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1108bp|location=Sequence derived from alignment at ch5:1798622..1799729- (Aspergillus niger KJC3)
AATACTGAAGTTCCTATACATCGTCAACACTAACAACACATCCATCTACA
ACCACCAGCTGTTAAACATCAAATGTTCCGTCCTCGCCTACCACTCTCTC
CTCACCGCATCTCCCATCTTCTCTCCCACCCCGCCAAAATGTCCGACTGG
AGCGCAACCCAATACCTCAAATTCGCCGACGAGCGCGCCATCCCAACCCA
AGATCTCCTAGCACACATCCCCCTGCAATCTCCCTCCCACATCGTTGATC
TTGGCTGCGGCCCCGGAAACTCCACCGCCATGCTTTCCGCCCGCTACCCA
TCCTGCCCGAGCATCTCCGGCATCGACTCCTCCCCAAACATGATCGCCCG
CGCCAAAGAATCATCTAACAACAATACGACCTTCGCCGTGGCGGACGTGG
AAACCTACTCTCCCCCAACCAACCACCCCGTAGATCTCTTCTTCTCCAAC
GCTGTCCTGCACTGGCTTCCCCGTTCTACTCGTCTCCCTACTATCCGCAG
ACTCCTACTAACTCTTCCCCCGGGCGGGGTCTTCGCCTTCCAGGTCCCGG
ATACCTTGAACGAGCCATCGCATACATCTATGCGGGAGGTCGCGAGGACG
GGGCCCTGGGCGGAACATCTACGGAGTACGTTGGTAGAGAGGGATGAGTT
GGAGTCACCCGGGGAGATTTATGATGCGTTGGTGGACTGTTGTGAGAGTT
TGAGGATTTGGGAGTCGGTGTATTATCATTCCCTTGGGAGTTGGGGGGAG
ATTGTGGAGTGGGTGAAGGGGACGGGGTTGAGGCCGTATTTGGATGGGTT
GAGGGGAGAGGAGGAACGGGGGGAGTTTTTGAAGGTGTATGAGGAGAAAT
CGAGGGAGAAGTATGAGAAAAGGGCTGATGGGAGGGTATTGTTGAGGTAT
CCCAGGTTGTTTGCTGTTGCTGTTCGGAAGTGATTTTCTTCTCTTGTTTA
TTTACGAGATTGGGTTTGGAGGTGCAGTGTATAGGTAGAGGACAGAATGG
AGGATGCTCTGATCATGTCATCCAAGCTTCCAGTGTATATGGCAGGCATG
CATGCTGGTATAATCCTAAGTTTATAGCTCGCATATGGAATATATCGTCA
GGTCCATG
back to top

Coding sequence (CDS) from alignment at ch5:1798622..1799729-

>KJC3_007202-T1 ID=KJC3_007202-T1|Name=KJC3_007202-T1|organism=Aspergillus niger KJC3|type=CDS|length=861bp|location=Sequence derived from alignment at ch5:1798622..1799729- (Aspergillus niger KJC3)
ATGTTCCGTCCTCGCCTACCACTCTCTCCTCACCGCATCTCCCATCTTCT
CTCCCACCCCGCCAAAATGTCCGACTGGAGCGCAACCCAATACCTCAAAT
TCGCCGACGAGCGCGCCATCCCAACCCAAGATCTCCTAGCACACATCCCC
CTGCAATCTCCCTCCCACATCGTTGATCTTGGCTGCGGCCCCGGAAACTC
CACCGCCATGCTTTCCGCCCGCTACCCATCCTGCCCGAGCATCTCCGGCA
TCGACTCCTCCCCAAACATGATCGCCCGCGCCAAAGAATCATCTAACAAC
AATACGACCTTCGCCGTGGCGGACGTGGAAACCTACTCTCCCCCAACCAA
CCACCCCGTAGATCTCTTCTTCTCCAACGCTGTCCTGCACTGGCTTCCCC
GTTCTACTCGTCTCCCTACTATCCGCAGACTCCTACTAACTCTTCCCCCG
GGCGGGGTCTTCGCCTTCCAGGTCCCGGATACCTTGAACGAGCCATCGCA
TACATCTATGCGGGAGGTCGCGAGGACGGGGCCCTGGGCGGAACATCTAC
GGAGTACGTTGGTAGAGAGGGATGAGTTGGAGTCACCCGGGGAGATTTAT
GATGCGTTGGTGGACTGTTGTGAGAGTTTGAGGATTTGGGAGTCGGTGTA
TTATCATTCCCTTGGGAGTTGGGGGGAGATTGTGGAGTGGGTGAAGGGGA
CGGGGTTGAGGCCGTATTTGGATGGGTTGAGGGGAGAGGAGGAACGGGGG
GAGTTTTTGAAGGTGTATGAGGAGAAATCGAGGGAGAAGTATGAGAAAAG
GGCTGATGGGAGGGTATTGTTGAGGTATCCCAGGTTGTTTGCTGTTGCTG
TTCGGAAGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0030798trans-aconitate 2-methyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007202KJC3_007202Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007202-T1.cdsKJC3_007202-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007202-T1.utr3p1KJC3_007202-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007202-T1.exon1KJC3_007202-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007202-T1.utr5p1KJC3_007202-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007202-T1KJC3_007202-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR023149
DBxrefInterPro:IPR041698
DBxrefPFAM:PF05401
DBxrefPFAM:PF05175
DBxrefPFAM:PF13847
DBxrefPFAM:PF13649
DBxrefPFAM:PF13489
DBxrefPFAM:PF08242
DBxrefPFAM:PF08241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1798622..1799729 -
Powered by Drupal