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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2001960..2003202- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007275-T1 ID=KJC3_007275-T1|Name=KJC3_007275-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1243bp|location=Sequence derived from alignment at ch5:2001960..2003202- (Aspergillus niger KJC3)
ATGACCGACCTCACCCCAACATTCTCCGAGCTGCTGCGCAGCAAATCCCC
TTCTTCGAAACTCTCCACAGGCTACATGACCACCGAAATCGCCGACGAAT
TCCTCAAAGAAGCCTACCGAATTGTACTTCCCACCATCATTACCCTCCAC
CCTCACTCAGATACTAACAACCATCCCAATTAAATTAAACAGAATAACCA
TATAACATCCTTACTATCCTACCTCCACACAATCCGCCCTTCCTACCTCT
CCCTCACCACAAAACCCACCACCAAACAACAACACCAACACCAACAACCA
GAGATCCTAGACGACACCGCCCGCGACACCATCACCACCACCACCTCGAC
CCTCCTATCCAACCTCTCCACTTCAATCACGACCCTCAGCGCAGCGGAGA
ATCTCCGCCAGGAAACCGTCTCTAGAAGCATAACGCAGCGGTTCGGGAAG
GGGTTGTTGGCGAAGTGGGCGGGGGGCGCAACACTCACCTCTGGAACCGA
TGATAATAATGAGGGAAAGGAGGAAGAACAGGTCGTGGAAGAAGAGAAGG
AGAAGGTGTTGAAGGGGCTGAGGGAGAGTGTGCTTTTCTATCTGAGGATT
AAGTTGGGAGGGGTGGTTAATGAGCAGAGGGATATGGTCGAGAAGAGGAT
TGAGAGGGTTAGGGAGAGGGAGAGGAGTGTTTTGTATAAATCAAGTGGTG
GTAAGGGTGGATGGGGGAGTGTGGAGGGGGGAGAGTGGAGGGGTGATGTT
GCTGGAGGTGGTACTTCGGGAAATGTGATGATGGATGAGAGTGAAGTCAA
GGAGATCGAGAAGCAGCTGACCCCTCAGCAATTGCAGCTCTTTGAGGAGG
AGAATGATTCCATGGTCAAGTATTTTGAGGATGTGGTGGGGAAGGTTCAG
TAAGTTGATCTATCCCTCCCGTCCCTATTGTTTATTCCTTGTTTTGTCTT
GTGTTACCGGTGGGGAGATTGGCTAATGAGTATGGTTGTTGGTTATGTGC
AGGAACGCGGAGAAATCTCTCCTTGAGATATCCTCCCTCCAGCAGACGCT
CGTGTCGCATTTGTCTACACAGGAGGAATACATTTCGCAGCTTGTGACGG
ATGCGAGCAATACGGAAGCGAATATCGGGCAGGGAAATAAGGAGTTGAAG
CGCGCGACGGAGAGACGGAGTACCGCGCAGGCGGTGTTTTGGGGGACTGT
GGGGTTGTGTACGTGGTTGGTTGTTTGGGATTTGGTTTTTTAG back to topCoding sequence (CDS) from alignment at ch5:2001960..2003202- >KJC3_007275-T1 ID=KJC3_007275-T1|Name=KJC3_007275-T1|organism=Aspergillus niger KJC3|type=CDS|length=3213bp|location=Sequence derived from alignment at ch5:2001960..2003202- (Aspergillus niger KJC3)
GAACGCGGAGAAATCTCTCCTTGAGATATCCTCCCTCCAGCAGACGCTCG
TGTCGCATTTGTCTACACAGGAGGAATACATTTCGCAGCTTGTGACGGAT
GCGAGCAATACGGAAGCGAATATCGGGCAGGGAAATAAGGAGTTGAAGCG
CGCGACGGAGAGACGGAGTACCGCGCAGGCGGTGTTTTGGGGGACTGTGG
GGTTGTGTACGTGGTTGGTTGTTTGGGATTTGGTTTTTTAGAATAACCAT
ATAACATCCTTACTATCCTACCTCCACACAATCCGCCCTTCCTACCTCTC
CCTCACCACAAAACCCACCACCAAACAACAACACCAACACCAACAACCAG
AGATCCTAGACGACACCGCCCGCGACACCATCACCACCACCACCTCGACC
CTCCTATCCAACCTCTCCACTTCAATCACGACCCTCAGCGCAGCGGAGAA
TCTCCGCCAGGAAACCGTCTCTAGAAGCATAACGCAGCGGTTCGGGAAGG
GGTTGTTGGCGAAGTGGGCGGGGGGCGCAACACTCACCTCTGGAACCGAT
GATAATAATGAGGGAAAGGAGGAAGAACAGGTCGTGGAAGAAGAGAAGGA
GAAGGTGTTGAAGGGGCTGAGGGAGAGTGTGCTTTTCTATCTGAGGATTA
AGTTGGGAGGGGTGGTTAATGAGCAGAGGGATATGGTCGAGAAGAGGATT
GAGAGGGTTAGGGAGAGGGAGAGGAGTGTTTTGTATAAATCAAGTGGTGG
TAAGGGTGGATGGGGGAGTGTGGAGGGGGGAGAGTGGAGGGGTGATGTTG
CTGGAGGTGGTACTTCGGGAAATGTGATGATGGATGAGAGTGAAGTCAAG
GAGATCGAGAAGCAGCTGACCCCTCAGCAATTGCAGCTCTTTGAGGAGGA
GAATGATTCCATGGTCAAGTATTTTGAGGATGTGGTGGGGAAGGTTCAAT
GACCGACCTCACCCCAACATTCTCCGAGCTGCTGCGCAGCAAATCCCCTT
CTTCGAAACTCTCCACAGGCTACATGACCACCGAAATCGCCGACGAATTC
CTCAAAGAAGCCTACCGAATTGAACGCGGAGAAATCTCTCCTTGAGATAT
CCTCCCTCCAGCAGACGCTCGTGTCGCATTTGTCTACACAGGAGGAATAC
ATTTCGCAGCTTGTGACGGATGCGAGCAATACGGAAGCGAATATCGGGCA
GGGAAATAAGGAGTTGAAGCGCGCGACGGAGAGACGGAGTACCGCGCAGG
CGGTGTTTTGGGGGACTGTGGGGTTGTGTACGTGGTTGGTTGTTTGGGAT
TTGGTTTTTTAGAATAACCATATAACATCCTTACTATCCTACCTCCACAC
AATCCGCCCTTCCTACCTCTCCCTCACCACAAAACCCACCACCAAACAAC
AACACCAACACCAACAACCAGAGATCCTAGACGACACCGCCCGCGACACC
ATCACCACCACCACCTCGACCCTCCTATCCAACCTCTCCACTTCAATCAC
GACCCTCAGCGCAGCGGAGAATCTCCGCCAGGAAACCGTCTCTAGAAGCA
TAACGCAGCGGTTCGGGAAGGGGTTGTTGGCGAAGTGGGCGGGGGGCGCA
ACACTCACCTCTGGAACCGATGATAATAATGAGGGAAAGGAGGAAGAACA
GGTCGTGGAAGAAGAGAAGGAGAAGGTGTTGAAGGGGCTGAGGGAGAGTG
TGCTTTTCTATCTGAGGATTAAGTTGGGAGGGGTGGTTAATGAGCAGAGG
GATATGGTCGAGAAGAGGATTGAGAGGGTTAGGGAGAGGGAGAGGAGTGT
TTTGTATAAATCAAGTGGTGGTAAGGGTGGATGGGGGAGTGTGGAGGGGG
GAGAGTGGAGGGGTGATGTTGCTGGAGGTGGTACTTCGGGAAATGTGATG
ATGGATGAGAGTGAAGTCAAGGAGATCGAGAAGCAGCTGACCCCTCAGCA
ATTGCAGCTCTTTGAGGAGGAGAATGATTCCATGGTCAAGTATTTTGAGG
ATGTGGTGGGGAAGGTTCAATGACCGACCTCACCCCAACATTCTCCGAGC
TGCTGCGCAGCAAATCCCCTTCTTCGAAACTCTCCACAGGCTACATGACC
ACCGAAATCGCCGACGAATTCCTCAAAGAAGCCTACCGAATTGAACGCGG
AGAAATCTCTCCTTGAGATATCCTCCCTCCAGCAGACGCTCGTGTCGCAT
TTGTCTACACAGGAGGAATACATTTCGCAGCTTGTGACGGATGCGAGCAA
TACGGAAGCGAATATCGGGCAGGGAAATAAGGAGTTGAAGCGCGCGACGG
AGAGACGGAGTACCGCGCAGGCGGTGTTTTGGGGGACTGTGGGGTTGTGT
ACGTGGTTGGTTGTTTGGGATTTGGTTTTTTAGAATAACCATATAACATC
CTTACTATCCTACCTCCACACAATCCGCCCTTCCTACCTCTCCCTCACCA
CAAAACCCACCACCAAACAACAACACCAACACCAACAACCAGAGATCCTA
GACGACACCGCCCGCGACACCATCACCACCACCACCTCGACCCTCCTATC
CAACCTCTCCACTTCAATCACGACCCTCAGCGCAGCGGAGAATCTCCGCC
AGGAAACCGTCTCTAGAAGCATAACGCAGCGGTTCGGGAAGGGGTTGTTG
GCGAAGTGGGCGGGGGGCGCAACACTCACCTCTGGAACCGATGATAATAA
TGAGGGAAAGGAGGAAGAACAGGTCGTGGAAGAAGAGAAGGAGAAGGTGT
TGAAGGGGCTGAGGGAGAGTGTGCTTTTCTATCTGAGGATTAAGTTGGGA
GGGGTGGTTAATGAGCAGAGGGATATGGTCGAGAAGAGGATTGAGAGGGT
TAGGGAGAGGGAGAGGAGTGTTTTGTATAAATCAAGTGGTGGTAAGGGTG
GATGGGGGAGTGTGGAGGGGGGAGAGTGGAGGGGTGATGTTGCTGGAGGT
GGTACTTCGGGAAATGTGATGATGGATGAGAGTGAAGTCAAGGAGATCGA
GAAGCAGCTGACCCCTCAGCAATTGCAGCTCTTTGAGGAGGAGAATGATT
CCATGGTCAAGTATTTTGAGGATGTGGTGGGGAAGGTTCAATGACCGACC
TCACCCCAACATTCTCCGAGCTGCTGCGCAGCAAATCCCCTTCTTCGAAA
CTCTCCACAGGCTACATGACCACCGAAATCGCCGACGAATTCCTCAAAGA
AGCCTACCGAATT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000727 |
| DBxref | InterPro:IPR019529 |
| DBxref | PFAM:PF10496 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2001960..2003202 - |
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