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KJC3_007280-T1, KJC3_007280-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007280-T1
Unique NameKJC3_007280-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2015745..2017186+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007280-T1 ID=KJC3_007280-T1|Name=KJC3_007280-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1442bp|location=Sequence derived from alignment at ch5:2015745..2017186+ (Aspergillus niger KJC3)
CCAGTTCAAGCACCCGACAGATCTTCACCATTCGTGTACAAGCTACATTG
GAAGCTCAATTGACTCTATATATTAATAGTTTTAGCTTGATCTTTATTTG
ACCCTCACTTCCAGTCCCCAAGTCTCTACCGCCATGGCCGCGAGCCAGGA
TGCCGTCTCCTTCGATGCGATCATCCAAGCCGGTATGACCGCCATTCCCC
GACTCACCCATGCAGAGCGCTTGAGATTAACAGGCTTGATTCAGATCGCA
AGAGAAGACGCAACGAAGAATTAGCGAACCAGCTCCTGAGCAAGAAGAAA
ACGACCAACACGGCTACGAAACCGACAGGGAAGACGCAGAATGTGAAACC
GGGCAGCTTGGCAAGTCGGATTGGAGTAGCGAAGGTGAGGACAATAAGGA
CCTATGCAAGTCTGCTCATTCTTGTCGCAATACTGACTCGATATATCGCT
CAATCCAGCGCTCCGTATCGGCTACTCTACCGGCCAAAACAACCCCTCCA
ATCCCAGCGCCCGCGCGACAAGGTGCCCGACAGAGCGCAAGGCCATCGAA
CAAGCGCCGCCCTGACGAAAACCGTCTCCTTTCTGCACTCAATCCCGAGA
GCGGCCAGGCTAACGTGCGGAACGGAGGTGGATTGACGATCAAAGGCAAA
GGATCCGGACCGTTTGTCGTCGTCGGTAGCAACTTCGCGCCAGGGACTAC
GGCAGCCGATATTCAATCAGCTCTGGAACCTGTTTCGGGCCGGATATTAC
GCTGCTGGGTCACTTCGCAACATCCTGTTGTCACAGCGGAGATTACATTT
GCAGAGAGACAGGCCGCAGAGAGTGCCGTTGCCAACTTTCACAACCAGAG
GGTAGGCTTGCTCGTCGCGATTTCTTCAGTGAACAATACTAATTGATCAG
GCCGATGGTCGGATTCTATCATTCCACCTAAAGCAACCTGCGAACCCCGA
TTTGTTCGAGCGCTCCAATGCCCAGCCCGCCGTACAGAACTCCCAATCTT
TCAGTGACCTCCGTGAGCAAGCGGACCGCGATCGCCGCTCTCATCGCTTG
GCTGATGCAGCTGTCCAGGACGGACGGTGGGGATTCAATGATCAGAACCA
GTCTGGCCAAGGCCCACCCAGGGGGAACAATCGCAGAAACCGGGGTAACC
GGAAGGCAAGGGGCGGAGCACAGAATACTCAAGAAACTGGCCTTTATAGC
GATCAGATGATGGTTGATGCACCACAGCAGAACCAAAGAAACCTAGGCAG
GCGGTAATGTAGCCATTCGGCGGTTTCAGTCGGAAAAAGCGTTGTGGGAT
ACAGGCCGTCCTGCGATCAGGCAGGATGGATCTACTTCTTTACGGATTAC
ATGGTCCTGTAGTTACCTTGGCTTGTCACTGGATGGAGACCTGTACGATA
CGAAGGAATACATTGCTACCGAACGAAGACTTCAGTTTGGAC
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Coding sequence (CDS) from alignment at ch5:2015745..2017186+

>KJC3_007280-T1 ID=KJC3_007280-T1|Name=KJC3_007280-T1|organism=Aspergillus niger KJC3|type=CDS|length=3756bp|location=Sequence derived from alignment at ch5:2015745..2017186+ (Aspergillus niger KJC3)
ATGGCCGCGAGCCAGGATGCCGTCTCCTTCGATGCGATCATCCAAGCCGA
TCGCAAGAGAAGACGCAACGAAGAATTAGCGAACCAGCTCCTGAGCAAGA
AGAAAACGACCAACACGGCTACGAAACCGACAGGGAAGACGCAGAATGTG
AAACCGGGCAGCTTGGCAAGTCGGATTGGAGTAGCGAAGCGCTCCGTATC
GGCTACTCTACCGGCCAAAACAACCCCTCCAATCCCAGCGCCCGCGCGAC
AAGGTGCCCGACAGAGCGCAAGGCCATCGAACAAGCGCCGCCCTGACGAA
AACCGTCTCCTTTCTGCACTCAATCCCGAGAGCGGCCAGGCTAACGTGCG
GAACGGAGGTGGATTGACGATCAAAGGCAAAGGATCCGGACCGTTTGTCG
TCGTCGGTAGCAACTTCGCGCCAGGGACTACGGCAGCCGATATTCAATCA
GCTCTGGAACCTGTTTCGGGCCGGATATTACGCTGCTGGGTCACTTCGCA
ACATCCTGTTGTCACAGCGGAGATTACATTTGCAGAGAGACAGGCCGCAG
AGAGTGCCGTTGCCAACTTTCACAACCAGAGGGCCGATGGTCGGATTCTA
TCATTCCACCTAAAGCAACCTGCGAACCCCGATTTGTTCGAGCGCTCCAA
TGCCCAGCCCGCCGTACAGAACTCCCAATCTTTCAGTGACCTCCGTGAGC
AAGCGGACCGCGATCGCCGCTCTCATCGCTTGGCTGATGCAGCTGTCCAG
GACGGACGGTGGGGATTCAATGATCAGAACCAGTCTGGCCAAGGCCCACC
CAGGGGGAACAATCGCAGAAACCGGGGTAACCGGAAGGCAAGGGGCGGAG
CACAGAATACTCAAGAAACTGGCCTTTATAGCGATCAGATGATGGTTGAT
GCACCACAGCAGAACCAAAGAAACCTAGGCAGGCGGTAAATGGCCGCGAG
CCAGGATGCCGTCTCCTTCGATGCGATCATCCAAGCCGATCGCAAGAGAA
GACGCAACGAAGAATTAGCGAACCAGCTCCTGAGCAAGAAGAAAACGACC
AACACGGCTACGAAACCGACAGGGAAGACGCAGAATGTGAAACCGGGCAG
CTTGGCAAGTCGGATTGGAGTAGCGAAGCGCTCCGTATCGGCTACTCTAC
CGGCCAAAACAACCCCTCCAATCCCAGCGCCCGCGCGACAAGGTGCCCGA
CAGAGCGCAAGGCCATCGAACAAGCGCCGCCCTGACGAAAACCGTCTCCT
TTCTGCACTCAATCCCGAGAGCGGCCAGGCTAACGTGCGGAACGGAGGTG
GATTGACGATCAAAGGCAAAGGATCCGGACCGTTTGTCGTCGTCGGTAGC
AACTTCGCGCCAGGGACTACGGCAGCCGATATTCAATCAGCTCTGGAACC
TGTTTCGGGCCGGATATTACGCTGCTGGGTCACTTCGCAACATCCTGTTG
TCACAGCGGAGATTACATTTGCAGAGAGACAGGCCGCAGAGAGTGCCGTT
GCCAACTTTCACAACCAGAGGGCCGATGGTCGGATTCTATCATTCCACCT
AAAGCAACCTGCGAACCCCGATTTGTTCGAGCGCTCCAATGCCCAGCCCG
CCGTACAGAACTCCCAATCTTTCAGTGACCTCCGTGAGCAAGCGGACCGC
GATCGCCGCTCTCATCGCTTGGCTGATGCAGCTGTCCAGGACGGACGGTG
GGGATTCAATGATCAGAACCAGTCTGGCCAAGGCCCACCCAGGGGGAACA
ATCGCAGAAACCGGGGTAACCGGAAGGCAAGGGGCGGAGCACAGAATACT
CAAGAAACTGGCCTTTATAGCGATCAGATGATGGTTGATGCACCACAGCA
GAACCAAAGAAACCTAGGCAGGCGGTAAATGGCCGCGAGCCAGGATGCCG
TCTCCTTCGATGCGATCATCCAAGCCGATCGCAAGAGAAGACGCAACGAA
GAATTAGCGAACCAGCTCCTGAGCAAGAAGAAAACGACCAACACGGCTAC
GAAACCGACAGGGAAGACGCAGAATGTGAAACCGGGCAGCTTGGCAAGTC
GGATTGGAGTAGCGAAGCGCTCCGTATCGGCTACTCTACCGGCCAAAACA
ACCCCTCCAATCCCAGCGCCCGCGCGACAAGGTGCCCGACAGAGCGCAAG
GCCATCGAACAAGCGCCGCCCTGACGAAAACCGTCTCCTTTCTGCACTCA
ATCCCGAGAGCGGCCAGGCTAACGTGCGGAACGGAGGTGGATTGACGATC
AAAGGCAAAGGATCCGGACCGTTTGTCGTCGTCGGTAGCAACTTCGCGCC
AGGGACTACGGCAGCCGATATTCAATCAGCTCTGGAACCTGTTTCGGGCC
GGATATTACGCTGCTGGGTCACTTCGCAACATCCTGTTGTCACAGCGGAG
ATTACATTTGCAGAGAGACAGGCCGCAGAGAGTGCCGTTGCCAACTTTCA
CAACCAGAGGGCCGATGGTCGGATTCTATCATTCCACCTAAAGCAACCTG
CGAACCCCGATTTGTTCGAGCGCTCCAATGCCCAGCCCGCCGTACAGAAC
TCCCAATCTTTCAGTGACCTCCGTGAGCAAGCGGACCGCGATCGCCGCTC
TCATCGCTTGGCTGATGCAGCTGTCCAGGACGGACGGTGGGGATTCAATG
ATCAGAACCAGTCTGGCCAAGGCCCACCCAGGGGGAACAATCGCAGAAAC
CGGGGTAACCGGAAGGCAAGGGGCGGAGCACAGAATACTCAAGAAACTGG
CCTTTATAGCGATCAGATGATGGTTGATGCACCACAGCAGAACCAAAGAA
ACCTAGGCAGGCGGTAAATGGCCGCGAGCCAGGATGCCGTCTCCTTCGAT
GCGATCATCCAAGCCGATCGCAAGAGAAGACGCAACGAAGAATTAGCGAA
CCAGCTCCTGAGCAAGAAGAAAACGACCAACACGGCTACGAAACCGACAG
GGAAGACGCAGAATGTGAAACCGGGCAGCTTGGCAAGTCGGATTGGAGTA
GCGAAGCGCTCCGTATCGGCTACTCTACCGGCCAAAACAACCCCTCCAAT
CCCAGCGCCCGCGCGACAAGGTGCCCGACAGAGCGCAAGGCCATCGAACA
AGCGCCGCCCTGACGAAAACCGTCTCCTTTCTGCACTCAATCCCGAGAGC
GGCCAGGCTAACGTGCGGAACGGAGGTGGATTGACGATCAAAGGCAAAGG
ATCCGGACCGTTTGTCGTCGTCGGTAGCAACTTCGCGCCAGGGACTACGG
CAGCCGATATTCAATCAGCTCTGGAACCTGTTTCGGGCCGGATATTACGC
TGCTGGGTCACTTCGCAACATCCTGTTGTCACAGCGGAGATTACATTTGC
AGAGAGACAGGCCGCAGAGAGTGCCGTTGCCAACTTTCACAACCAGAGGG
CCGATGGTCGGATTCTATCATTCCACCTAAAGCAACCTGCGAACCCCGAT
TTGTTCGAGCGCTCCAATGCCCAGCCCGCCGTACAGAACTCCCAATCTTT
CAGTGACCTCCGTGAGCAAGCGGACCGCGATCGCCGCTCTCATCGCTTGG
CTGATGCAGCTGTCCAGGACGGACGGTGGGGATTCAATGATCAGAACCAG
TCTGGCCAAGGCCCACCCAGGGGGAACAATCGCAGAAACCGGGGTAACCG
GAAGGCAAGGGGCGGAGCACAGAATACTCAAGAAACTGGCCTTTATAGCG
ATCAGATGATGGTTGATGCACCACAGCAGAACCAAAGAAACCTAGGCAGG
CGGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007280KJC3_007280Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007280-T1KJC3_007280-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007280-T1.utr5p1KJC3_007280-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007280-T1.exon1KJC3_007280-T1.exon1Aspergillus niger KJC3exon
KJC3_007280-T1.exon2KJC3_007280-T1.exon2Aspergillus niger KJC3exon
KJC3_007280-T1.exon3KJC3_007280-T1.exon3Aspergillus niger KJC3exon
KJC3_007280-T1.exon4KJC3_007280-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007280-T1.cdsKJC3_007280-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007280-T1.utr3p1KJC3_007280-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2015745..2017186 +
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