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KJC3_007288-T1, KJC3_007288-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007288-T1
Unique NameKJC3_007288-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2031353..2032905-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007288-T1 ID=KJC3_007288-T1|Name=KJC3_007288-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1553bp|location=Sequence derived from alignment at ch5:2031353..2032905- (Aspergillus niger KJC3)
GAACACTGTATCTCATCTCATAACTAAATCTACATGCCATGTCAGACATT
AGTCCCCGAGAACTAATAGTCTTAACAATAGAAAACCGTCCTGGTCCCTG
ACCCTCCCTCCCCTCCTGTACTACAAATACACCCACCCACTCCAACCATA
CCCGAAACTTTGCAAACATCAGCGGCTGAAACACCGCCGGAAGTGGATTA
ACACGTGACCCACTCCATTCCCCACACGCCCATCATCCACGGCTCTCTGC
TAAAGTCCCATCCGACAATAATTTTATGGAAACCACCTCACCATCAAATC
AATTTACCGCGGTGATCAACAGCTGGGTTCGACGCGGACGACATATTGGG
TAATGGTTAATAACACCTAAGGCAACGGACAACAACCAACACAGCAACAC
CGACAATGCTTCCATCAGCAGCGCCCTACCTACTACGACCTACTAGTAAC
CGTGCCGCTTTGCGCCGGCTACAACTACAGCACATCGGTCTTCTTCCCCG
CAGCACAACAACAATCACAGGAACAACAGCATCATCATCACTAGTACGAA
AATATGCCACAACGCAAGGCGCCGCCCCGAAACGGCGAAACGTGACTGTT
CTATCGGACGATGGACGATACGAGTGGGGAGAATTGAGCGGGAGGGAGAA
AGTTGCGAGGGCGACGCAGCAGTCGGTGAATTTCGTGGTGATTATTGCGG
GGGCGGTTTTGACGGTTCGTTCAAGCTATATATAATCCGGACCGTTGGGG
TGTGATTGCTGATGTGTGTTATTGAGTAGGGCGGGGTCTTCTACCTTCTC
TTCACGGAGGTCTTTTCCCCGAATAGCAAGACATGGCAGTTTGAAAAAGC
TGTCGAGCGCATCAAGGATGATGTTCGGTGTACGAACCTCCTGGGTGATC
GGAGGGAGATCAAGGCTTATGGGGAGAATACGTGGAGTAGATGGGCGAGG
AATAGGCCTATTGCGTACGTTAATTTTCTTTGCCATTGTCTACTGGTGTG
AGGGAACGGGGTGATGCTGACTGGGATATAGGACGTCTGTCTATCAGGAC
AGAGTGGGTCGGGAACACCTGAAGATGAACTTCCACGTATGCGATGCTCT
CTTCTTCCTCTGGGTTGTGTGTGGTATACTGATTGGTTGGTGATATAGGT
CGAAGGTCCTCTTAATTCCGGAACCGTGTTTGTGCACATGATGAAGCCGT
TGAATGAGCATCACTGGGAGTATCAGCTTCTTGCTTTGGAAGTGCCGGGT
TAGTTTGATCCATATAGCACCCTTTGCTTCAGTTATCCTTGGGGTTGGAC
TGACTTGTGTAGGACATTCCCGGGTTGTGCTTGAAGAAGCGCGCGAGAAG
CCTGGCGTTGGGCAAGCACTGAAGATCTTTGGCATTAAGTGGCGGTAGGT
GGAAAGCACCATCTGGATCGGCACCGAAGGGATTGCGGTCATCCCGAATA
TGAATACTGTATTATATACGTGAACCGATTATGAGTGTAAAATATACCAT
AGGAGAACTGAATCCAGACAGGTCGATACTGGCGACCTTGTTTCATAATA
CCC
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Coding sequence (CDS) from alignment at ch5:2031353..2032905-

>KJC3_007288-T1 ID=KJC3_007288-T1|Name=KJC3_007288-T1|organism=Aspergillus niger KJC3|type=CDS|length=3675bp|location=Sequence derived from alignment at ch5:2031353..2032905- (Aspergillus niger KJC3)
GACATTCCCGGGTTGTGCTTGAAGAAGCGCGCGAGAAGCCTGGCGTTGGG
CAAGCACTGAAGATCTTTGGCATTAAGTGGCGGTAGGTCGAAGGTCCTCT
TAATTCCGGAACCGTGTTTGTGCACATGATGAAGCCGTTGAATGAGCATC
ACTGGGAGTATCAGCTTCTTGCTTTGGAAGTGCCGGGACGTCTGTCTATC
AGGACAGAGTGGGTCGGGAACACCTGAAGATGAACTTCCACGGCGGGGTC
TTCTACCTTCTCTTCACGGAGGTCTTTTCCCCGAATAGCAAGACATGGCA
GTTTGAAAAAGCTGTCGAGCGCATCAAGGATGATGTTCGGTGTACGAACC
TCCTGGGTGATCGGAGGGAGATCAAGGCTTATGGGGAGAATACGTGGAGT
AGATGGGCGAGGAATAGGCCTATTGCATGCTTCCATCAGCAGCGCCCTAC
CTACTACGACCTACTAGTAACCGTGCCGCTTTGCGCCGGCTACAACTACA
GCACATCGGTCTTCTTCCCCGCAGCACAACAACAATCACAGGAACAACAG
CATCATCATCACTAGTACGAAAATATGCCACAACGCAAGGCGCCGCCCCG
AAACGGCGAAACGTGACTGTTCTATCGGACGATGGACGATACGAGTGGGG
AGAATTGAGCGGGAGGGAGAAAGTTGCGAGGGCGACGCAGCAGTCGGTGA
ATTTCGTGGTGATTATTGCGGGGGCGGTTTTGACGGACATTCCCGGGTTG
TGCTTGAAGAAGCGCGCGAGAAGCCTGGCGTTGGGCAAGCACTGAAGATC
TTTGGCATTAAGTGGCGGTAGGTCGAAGGTCCTCTTAATTCCGGAACCGT
GTTTGTGCACATGATGAAGCCGTTGAATGAGCATCACTGGGAGTATCAGC
TTCTTGCTTTGGAAGTGCCGGGACGTCTGTCTATCAGGACAGAGTGGGTC
GGGAACACCTGAAGATGAACTTCCACGGCGGGGTCTTCTACCTTCTCTTC
ACGGAGGTCTTTTCCCCGAATAGCAAGACATGGCAGTTTGAAAAAGCTGT
CGAGCGCATCAAGGATGATGTTCGGTGTACGAACCTCCTGGGTGATCGGA
GGGAGATCAAGGCTTATGGGGAGAATACGTGGAGTAGATGGGCGAGGAAT
AGGCCTATTGCATGCTTCCATCAGCAGCGCCCTACCTACTACGACCTACT
AGTAACCGTGCCGCTTTGCGCCGGCTACAACTACAGCACATCGGTCTTCT
TCCCCGCAGCACAACAACAATCACAGGAACAACAGCATCATCATCACTAG
TACGAAAATATGCCACAACGCAAGGCGCCGCCCCGAAACGGCGAAACGTG
ACTGTTCTATCGGACGATGGACGATACGAGTGGGGAGAATTGAGCGGGAG
GGAGAAAGTTGCGAGGGCGACGCAGCAGTCGGTGAATTTCGTGGTGATTA
TTGCGGGGGCGGTTTTGACGGACATTCCCGGGTTGTGCTTGAAGAAGCGC
GCGAGAAGCCTGGCGTTGGGCAAGCACTGAAGATCTTTGGCATTAAGTGG
CGGTAGGTCGAAGGTCCTCTTAATTCCGGAACCGTGTTTGTGCACATGAT
GAAGCCGTTGAATGAGCATCACTGGGAGTATCAGCTTCTTGCTTTGGAAG
TGCCGGGACGTCTGTCTATCAGGACAGAGTGGGTCGGGAACACCTGAAGA
TGAACTTCCACGGCGGGGTCTTCTACCTTCTCTTCACGGAGGTCTTTTCC
CCGAATAGCAAGACATGGCAGTTTGAAAAAGCTGTCGAGCGCATCAAGGA
TGATGTTCGGTGTACGAACCTCCTGGGTGATCGGAGGGAGATCAAGGCTT
ATGGGGAGAATACGTGGAGTAGATGGGCGAGGAATAGGCCTATTGCATGC
TTCCATCAGCAGCGCCCTACCTACTACGACCTACTAGTAACCGTGCCGCT
TTGCGCCGGCTACAACTACAGCACATCGGTCTTCTTCCCCGCAGCACAAC
AACAATCACAGGAACAACAGCATCATCATCACTAGTACGAAAATATGCCA
CAACGCAAGGCGCCGCCCCGAAACGGCGAAACGTGACTGTTCTATCGGAC
GATGGACGATACGAGTGGGGAGAATTGAGCGGGAGGGAGAAAGTTGCGAG
GGCGACGCAGCAGTCGGTGAATTTCGTGGTGATTATTGCGGGGGCGGTTT
TGACGGACATTCCCGGGTTGTGCTTGAAGAAGCGCGCGAGAAGCCTGGCG
TTGGGCAAGCACTGAAGATCTTTGGCATTAAGTGGCGGTAGGTCGAAGGT
CCTCTTAATTCCGGAACCGTGTTTGTGCACATGATGAAGCCGTTGAATGA
GCATCACTGGGAGTATCAGCTTCTTGCTTTGGAAGTGCCGGGACGTCTGT
CTATCAGGACAGAGTGGGTCGGGAACACCTGAAGATGAACTTCCACGGCG
GGGTCTTCTACCTTCTCTTCACGGAGGTCTTTTCCCCGAATAGCAAGACA
TGGCAGTTTGAAAAAGCTGTCGAGCGCATCAAGGATGATGTTCGGTGTAC
GAACCTCCTGGGTGATCGGAGGGAGATCAAGGCTTATGGGGAGAATACGT
GGAGTAGATGGGCGAGGAATAGGCCTATTGCATGCTTCCATCAGCAGCGC
CCTACCTACTACGACCTACTAGTAACCGTGCCGCTTTGCGCCGGCTACAA
CTACAGCACATCGGTCTTCTTCCCCGCAGCACAACAACAATCACAGGAAC
AACAGCATCATCATCACTAGTACGAAAATATGCCACAACGCAAGGCGCCG
CCCCGAAACGGCGAAACGTGACTGTTCTATCGGACGATGGACGATACGAG
TGGGGAGAATTGAGCGGGAGGGAGAAAGTTGCGAGGGCGACGCAGCAGTC
GGTGAATTTCGTGGTGATTATTGCGGGGGCGGTTTTGACGGACATTCCCG
GGTTGTGCTTGAAGAAGCGCGCGAGAAGCCTGGCGTTGGGCAAGCACTGA
AGATCTTTGGCATTAAGTGGCGGTAGGTCGAAGGTCCTCTTAATTCCGGA
ACCGTGTTTGTGCACATGATGAAGCCGTTGAATGAGCATCACTGGGAGTA
TCAGCTTCTTGCTTTGGAAGTGCCGGGACGTCTGTCTATCAGGACAGAGT
GGGTCGGGAACACCTGAAGATGAACTTCCACGGCGGGGTCTTCTACCTTC
TCTTCACGGAGGTCTTTTCCCCGAATAGCAAGACATGGCAGTTTGAAAAA
GCTGTCGAGCGCATCAAGGATGATGTTCGGTGTACGAACCTCCTGGGTGA
TCGGAGGGAGATCAAGGCTTATGGGGAGAATACGTGGAGTAGATGGGCGA
GGAATAGGCCTATTGCATGCTTCCATCAGCAGCGCCCTACCTACTACGAC
CTACTAGTAACCGTGCCGCTTTGCGCCGGCTACAACTACAGCACATCGGT
CTTCTTCCCCGCAGCACAACAACAATCACAGGAACAACAGCATCATCATC
ACTAGTACGAAAATATGCCACAACGCAAGGCGCCGCCCCGAAACGGCGAA
ACGTGACTGTTCTATCGGACGATGGACGATACGAGTGGGGAGAATTGAGC
GGGAGGGAGAAAGTTGCGAGGGCGACGCAGCAGTCGGTGAATTTCGTGGT
GATTATTGCGGGGGCGGTTTTGACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005744TIM23 mitochondrial import inner membrane translocase complex
Vocabulary: Biological Process
TermDefinition
GO:0030150protein import into mitochondrial matrix
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIM21KJC3_007288Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007288-T1KJC3_007288-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007288-T1.cdsKJC3_007288-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007288-T1.utr3p1KJC3_007288-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007288-T1.exon5KJC3_007288-T1.exon5Aspergillus niger KJC3exon
KJC3_007288-T1.exon4KJC3_007288-T1.exon4Aspergillus niger KJC3exon
KJC3_007288-T1.exon3KJC3_007288-T1.exon3Aspergillus niger KJC3exon
KJC3_007288-T1.exon2KJC3_007288-T1.exon2Aspergillus niger KJC3exon
KJC3_007288-T1.exon1KJC3_007288-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007288-T1.utr5p1KJC3_007288-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR038552
DBxrefInterPro:IPR013261
DBxrefPFAM:PF08294
DBxrefPFAM:PF08695
Productmitochondrial import inner membrane translocase subunit tim21
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2031353..2032905 -
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