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KJC3_007360-T1, KJC3_007360-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007360-T1
Unique NameKJC3_007360-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2233760..2236189-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007360-T1 ID=KJC3_007360-T1|Name=KJC3_007360-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2430bp|location=Sequence derived from alignment at ch5:2233760..2236189- (Aspergillus niger KJC3)
ATGTCGGACGAGTCGAAATCGAAAGGCTTCCCGGACATCTCGGCCAAACT
GTCCGCAATCCCCAAGAAGTCGCTCTTTGAACGCCAGAAAGCCGAAGCGG
AAGCCAAACGAGCCCGCGAGCAAGCCGAGACCGCCGCCGTGTATGAGGAC
TTCGTCAAATCATTCGAAGATGACTCGCCAGCTCACGACAGACATTCCTC
CGATGGACGACTGAGCCGATTCCCGCCCAAAAATCCAGGCTTTGGAGGCC
CTGGGAAACGGCATTTCACGAGCTCGGGGCCGCGCTTGAGCGGTCCCGGT
ACTCTGGGACCACCTCCTCCGAGAAAGCGCACACATGAAGGGTTCCAGCC
AATACATCGGAATCGGGATATAGCGTCGGGGGTACTAGGCTTTGATAATA
CTGCACCGGCTGCCGCGTCGGCTTTCCGTGCGTCGGACGATGAGGATGAA
GGAGCTGGTGATGCGAAAGAGGCTGAACGGGCTGCCGCGAAACCTACGTT
ATATCTTGCTTCTCTACCGCCGGGGACTTCACCCTCGGTGCTCAAGTCCT
TGATACCCTCTGTTCTGACTGTCGACAATGTCAAGATCCTTCGCCCCCCA
GGTCAGCCTATAAACGACCGGAAATCGGTAGCCGCCATTGTCACTCTGGC
GAATGAGTCTGCGGCCTCGGATATTGATAGCACCGTCAGCGCCCTGCAAA
ACAGATACCTAGGATGGGGATACTATTTGACAATATCGAGACACCTTTCC
TCTGCCGCTATTGGCTCGACGATGCCGGTCACTGTCGGCCTGTCTTCCGC
AAGCTCCCTTCCTTTTGGCGCCAAGTCGATAGCGCCCGATATCCCTGGAC
GACTGAATCGTGCTCCACCCCCGGGGTTGCATCGTGGAGGATTTGCGCCG
CCATCGTCGTACGGATCGGCCTATGGGAGGAGTGGTCCTTCTACTCAGGT
TGAGGTGAAGGCACCGTCGGATCTGAAGCAACTGAAGTTGATACACAAGA
CACTGGAGAACCTTTTGAGTTATGGGCCGGAGTTTGAGGCACTGCTCATG
AGCAGACCCGAGGTTCAAAGGGACGAGAAATGGGCATGGATCTGGAATGC
TAGAAGTGCCGGTGGTGTGTACTATAGGTGGAAATTGTGGGAGATTCTCA
CCAACACCCGCCCCCCTGCACATCGAAGAGGCGGAACTCAACCCTCATGC
ACTATATTCGAGGGCGGTGCAAACTGGGCCCCTCCGGAGGCACATATCAA
GTTCGAGTATACAACACGCATGGACGAGTTTGTAACGGACGATGACTACG
ACTCCTCTGACGAAGAGATGTCTGATTATGAGGACGAAAAACGAAATCTT
GGTGGTGCACCACCAGCAGAAGGCCCTGGCGCCGCTAACGAGGGACTGGG
CTATATGAATCCTTTACAGAAGGCCAAGCTAACCCATCTGCTTGCTCGCC
TGCCGACTACGCACGCCAAATTACGAAAGGGCGATGTTGCTCGGGTTACG
GCTTTCGCCATTGAACACGCAGGCGCAGGGGCTGACGAAGTTGTGGAAAT
GATTGTGTCCAACATCATGAACCCGTTTGCCTACACCGGGGCGAACCCTG
ATCGCGAGGCAGAAACAGGAATTGCCCGTCGGGAACAAGCAGACCTAGCC
AAGGACAATCCCGCCGAGGAAGGGCGGCCATCGACGAAGGAAAATCTGGA
TACATCAGCTGCAAAGTTAGTTGGGCTTTATTTAGTTTCCGACATCCTCT
CATCTTCCGCTACGAGCGGCGTGCGACATGCTTGGCGGTATCGGCAGCTC
TTCGAGTCTGCGTTGAAAACACATCAGGTGTTCGAACATCTGGGGAGACT
TGAGAAGGATTTTAGATGGGGACGACTGAGGGCCGAAAAGTGGAAGCGCA
GCGTTGGCACTCTTCTTCACTTGTGGGAAGGCTGGTGTGTGTTTCCGCAG
TCAAGCCAAGAACACTTCTTCCAGATCTTTGAGAAGCCGCCGCTCACCGA
AGAGGAGCTACGAGAAGAGAGGGAGAAGGCCGAGGCCGAACGCGCCGCGA
GTGCATTCTCCAAGAACAAGAGCCGCTGGAAAACAGTCGATGAAGATGCT
ACCTCCGGCAAGTTTGATCCTGGGCGAGCCCCTGAAACGCATCCGCACCC
AATGGATGTCGATAAGCCGAGTGCTGCACCGGCAGGAGCTGAGAGCTTTG
ATGGGGAATCTATGAGTGATATTGATGGAGAGCCCATGGAGGACAGTGAC
CTGGAAGAAGCAGATGGAGAGCCCATGGAAGAAGACTCTGCTCCAGAGGA
AGATCCCAGAGAGTCGGAAGAGCAAATTCAAAAACCAGCCGATCCACCAG
CCCAACCGGAGTATCAACCGCCAGCCCGAAAGCCGCGGCCCAAGGCCGAA
GATATGTTTGCCGATTCGGACGACGAGTAA
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Coding sequence (CDS) from alignment at ch5:2233760..2236189-

>KJC3_007360-T1 ID=KJC3_007360-T1|Name=KJC3_007360-T1|organism=Aspergillus niger KJC3|type=CDS|length=2430bp|location=Sequence derived from alignment at ch5:2233760..2236189- (Aspergillus niger KJC3)
ATGTCGGACGAGTCGAAATCGAAAGGCTTCCCGGACATCTCGGCCAAACT
GTCCGCAATCCCCAAGAAGTCGCTCTTTGAACGCCAGAAAGCCGAAGCGG
AAGCCAAACGAGCCCGCGAGCAAGCCGAGACCGCCGCCGTGTATGAGGAC
TTCGTCAAATCATTCGAAGATGACTCGCCAGCTCACGACAGACATTCCTC
CGATGGACGACTGAGCCGATTCCCGCCCAAAAATCCAGGCTTTGGAGGCC
CTGGGAAACGGCATTTCACGAGCTCGGGGCCGCGCTTGAGCGGTCCCGGT
ACTCTGGGACCACCTCCTCCGAGAAAGCGCACACATGAAGGGTTCCAGCC
AATACATCGGAATCGGGATATAGCGTCGGGGGTACTAGGCTTTGATAATA
CTGCACCGGCTGCCGCGTCGGCTTTCCGTGCGTCGGACGATGAGGATGAA
GGAGCTGGTGATGCGAAAGAGGCTGAACGGGCTGCCGCGAAACCTACGTT
ATATCTTGCTTCTCTACCGCCGGGGACTTCACCCTCGGTGCTCAAGTCCT
TGATACCCTCTGTTCTGACTGTCGACAATGTCAAGATCCTTCGCCCCCCA
GGTCAGCCTATAAACGACCGGAAATCGGTAGCCGCCATTGTCACTCTGGC
GAATGAGTCTGCGGCCTCGGATATTGATAGCACCGTCAGCGCCCTGCAAA
ACAGATACCTAGGATGGGGATACTATTTGACAATATCGAGACACCTTTCC
TCTGCCGCTATTGGCTCGACGATGCCGGTCACTGTCGGCCTGTCTTCCGC
AAGCTCCCTTCCTTTTGGCGCCAAGTCGATAGCGCCCGATATCCCTGGAC
GACTGAATCGTGCTCCACCCCCGGGGTTGCATCGTGGAGGATTTGCGCCG
CCATCGTCGTACGGATCGGCCTATGGGAGGAGTGGTCCTTCTACTCAGGT
TGAGGTGAAGGCACCGTCGGATCTGAAGCAACTGAAGTTGATACACAAGA
CACTGGAGAACCTTTTGAGTTATGGGCCGGAGTTTGAGGCACTGCTCATG
AGCAGACCCGAGGTTCAAAGGGACGAGAAATGGGCATGGATCTGGAATGC
TAGAAGTGCCGGTGGTGTGTACTATAGGTGGAAATTGTGGGAGATTCTCA
CCAACACCCGCCCCCCTGCACATCGAAGAGGCGGAACTCAACCCTCATGC
ACTATATTCGAGGGCGGTGCAAACTGGGCCCCTCCGGAGGCACATATCAA
GTTCGAGTATACAACACGCATGGACGAGTTTGTAACGGACGATGACTACG
ACTCCTCTGACGAAGAGATGTCTGATTATGAGGACGAAAAACGAAATCTT
GGTGGTGCACCACCAGCAGAAGGCCCTGGCGCCGCTAACGAGGGACTGGG
CTATATGAATCCTTTACAGAAGGCCAAGCTAACCCATCTGCTTGCTCGCC
TGCCGACTACGCACGCCAAATTACGAAAGGGCGATGTTGCTCGGGTTACG
GCTTTCGCCATTGAACACGCAGGCGCAGGGGCTGACGAAGTTGTGGAAAT
GATTGTGTCCAACATCATGAACCCGTTTGCCTACACCGGGGCGAACCCTG
ATCGCGAGGCAGAAACAGGAATTGCCCGTCGGGAACAAGCAGACCTAGCC
AAGGACAATCCCGCCGAGGAAGGGCGGCCATCGACGAAGGAAAATCTGGA
TACATCAGCTGCAAAGTTAGTTGGGCTTTATTTAGTTTCCGACATCCTCT
CATCTTCCGCTACGAGCGGCGTGCGACATGCTTGGCGGTATCGGCAGCTC
TTCGAGTCTGCGTTGAAAACACATCAGGTGTTCGAACATCTGGGGAGACT
TGAGAAGGATTTTAGATGGGGACGACTGAGGGCCGAAAAGTGGAAGCGCA
GCGTTGGCACTCTTCTTCACTTGTGGGAAGGCTGGTGTGTGTTTCCGCAG
TCAAGCCAAGAACACTTCTTCCAGATCTTTGAGAAGCCGCCGCTCACCGA
AGAGGAGCTACGAGAAGAGAGGGAGAAGGCCGAGGCCGAACGCGCCGCGA
GTGCATTCTCCAAGAACAAGAGCCGCTGGAAAACAGTCGATGAAGATGCT
ACCTCCGGCAAGTTTGATCCTGGGCGAGCCCCTGAAACGCATCCGCACCC
AATGGATGTCGATAAGCCGAGTGCTGCACCGGCAGGAGCTGAGAGCTTTG
ATGGGGAATCTATGAGTGATATTGATGGAGAGCCCATGGAGGACAGTGAC
CTGGAAGAAGCAGATGGAGAGCCCATGGAAGAAGACTCTGCTCCAGAGGA
AGATCCCAGAGAGTCGGAAGAGCAAATTCAAAAACCAGCCGATCCACCAG
CCCAACCGGAGTATCAACCGCCAGCCCGAAAGCCGCGGCCCAAGGCCGAA
GATATGTTTGCCGATTCGGACGACGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007360KJC3_007360Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007360-T1.cdsKJC3_007360-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007360-T1.exon1KJC3_007360-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007360-T1KJC3_007360-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035967
DBxrefInterPro:IPR006569
DBxrefInterPro:IPR000061
DBxrefPFAM:PF01805
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2233760..2236189 -
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