|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2296770..2299272- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007382-T1 ID=KJC3_007382-T1|Name=KJC3_007382-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2503bp|location=Sequence derived from alignment at ch5:2296770..2299272- (Aspergillus niger KJC3)
CCACCAGCGGGCCAAACATTCCAGATCGCGGGCACCAGCCATCCACTCTG
AACCTCACCTCGTCTCTTCTTCCCTCCCTTTCCCCAGTCACTAACTACCA
CCTTCTCTCCCTCACATCCACATTTACATCCACTCTTACTACCACTACTC
CTCCTCTCTTTGTTTACGGCTACTAACGTTCCATTGGTCTCGCTCCCTTG
GATCTGCTCTTTGATAGTGACACGCCCATCGATATTGCGCGCCCTGTTAC
CCTTGGTTTACACGGTCGGCTTTTGGCGTTTTCCTCCCTTTTATCGCCCT
TAAACCTGTCACGGCCTGATTCTCGTCACCCACCACCCTTATATATCTCA
ATTGTTTTGGATTCGCGTCTATCGATTTAGCTGGGTATTATCGTGAATTT
GAAATTGGGGCTATCGAGCTTGTCACAGTCACACTGGACCTGTATTAGCC
CGTGTTCGGCATCTTATTCACAATGGCCACAACACCACCACCGCCCTCCA
CGCTACGAATCCCACCTACTCCGCGACTTGGAGCTAAATACGATGATTAT
GAGCCATATTCGACACGATACTCAGCCAGGCTAGCGAGCCAACGCGCTGC
CAGAGACAGAGAGTCTCGAACCACTCCCCCGCCTAGCTTCCCGAGCTCGA
AGACTGCGAACAAGTACGACATGAATGAATCCGACACTCTGTCCCCTCCT
GGCTCAGTCCAAACCTCGCCCCGGAAGCTCAAGTCGGCCCGGGCTACTGG
CTTGTTCGCGACACATTCACTTGAAGGCCCCTCCGGCACAAATGACTCCG
ATCCCTTCGGCGCAGGACCTTCCTCTCTCCGTCATCAATCGCGATCACTT
CGACCGACTATGACCGAAGGAATGCTTCCCACTCCTGCCAAGACGCCTCG
CAAGAAGGCTGTCGCGGATGTTGGAAACACCGCACGAGTGCTGTTTCCCC
CTCCTAGTGCCAGGAAGAAGACGAAGAAACACACGGGCTTTTCATTGGAT
AGTTTTTGCGAAGACGACACACAGGGTGGCTCAGAGATTCAGATTTACAC
CGACTCGCGCGATCGCATCCCGGAAGTCGACAAAAGCGAAGATAATCCGT
TCTACAACAAACCTACGGCCAGCAACACAACTACTCGTGCTTCCAGACGC
AAAGAGACCCGCCGCGACAAGGAGATAGACGACTCGCTTAATCGTGAGGA
TGGCATGCTTTACGTTTTGTAAGTTCCACGGTTTTTCCTATTTTACCTTG
TCTTGTGTTCTAACATATTCCGCAGTCGAGGCAAGAAAATGTTTCGCAAG
TTCACGGATGATGCTGAGAGCGACCTTGATGATGACGATGATGACTTGGG
CTTGCTGGCAGCCCGTCCAGACCTGATCGACTCATCTATCGACACTGTTC
GTCCACTCACTCGCTCGTCAATCAAGCCTCGCGTGCTCTTCCCTACCGCG
AGGTCTCAGACCCCTCAAGAATCTCGTTCGAGCGATGTCGATGAGGAGGC
GGCCACTGATATTGAGGACCATCTACTTCACGATGAGGTCGAGGAGGATG
AAAATCCTACAGTTGACGTGGAGATGCAGCAGCGGCCTGTCACTCCTCCC
CCGCAATCCACTGTTGCAACTCCGCCGTCCCCCGGGGCTACGATGCGGTC
ACTGCGTTCGCGATCCAAGCGAGATGGTCCCGAGCATAGCGAGACACCCA
CGGCCTCCGAAACCAAGAAAAAGCGCGTCAGTCCGTTTGACGGCTGGCTC
CGCAAAAAGACAGCTCCTGCTCTGACAGGGACCAAAGCCAAGAAGCGAGA
TGCCGAAGCCGCTGGCAGCCCTGGTGGCCCAGCTCCCAAGAAGACCCGAG
GCAACAAAGCGACTGCGTCGTGAGCATGATCTTGTCCGCCTATATGCAAG
GCTACCAGTGGAGCCCTGAAGCCGTCGGAAGCAGAGTCTTCCTTCATCTT
ACCGTCACGGATCCTACCGCAAAAAGAAACGCAAATCTTGACGAGTGTCC
TTGTTTTCAGCGTTCTTCTATCTTCTCGTTCGATATTCACTGGCGTCCTT
GACTTATAGGTCGACTATACTAGGATTTTTTTAATGTGTCCGGCTGTCCT
CAATTCAGTTTCCGTTTGTTTGATATCAGCTACTGAAGCACCATCATCTT
TTGTCTTGAACATAACAATGACTCCGAGTGATCAGTCGGAGAAAGGGAAC
AGGCGCGATATGATGGGCTAAATGGGACGGACGGATAGGTAAATGGGCTG
GACTGGCACATGGGATGGAGTTTTGTGTGTTCTTTTCTTTTCTCTTCCCC
TCTTATTCCTGCTTCTTTCAATGCTTCTTATTCTCATCTTGCCGGCGTGT
TCTCTGCTTCCTTCAACTGCTTATGTCTGTCTTTGTGACTTGCTCGTCTT
GAGCTCCCCGGCCTTTCTACTTAGCTTAGTTAGCTAGCTCGAGAGTTTTC
TCTCCTACAATCAACTTAGATACCAATCAATGAACATGAAAGTGTGATGT
CAG back to topCoding sequence (CDS) from alignment at ch5:2296770..2299272- >KJC3_007382-T1 ID=KJC3_007382-T1|Name=KJC3_007382-T1|organism=Aspergillus niger KJC3|type=CDS|length=2688bp|location=Sequence derived from alignment at ch5:2296770..2299272- (Aspergillus niger KJC3)
TCGAGGCAAGAAAATGTTTCGCAAGTTCACGGATGATGCTGAGAGCGACC
TTGATGATGACGATGATGACTTGGGCTTGCTGGCAGCCCGTCCAGACCTG
ATCGACTCATCTATCGACACTGTTCGTCCACTCACTCGCTCGTCAATCAA
GCCTCGCGTGCTCTTCCCTACCGCGAGGTCTCAGACCCCTCAAGAATCTC
GTTCGAGCGATGTCGATGAGGAGGCGGCCACTGATATTGAGGACCATCTA
CTTCACGATGAGGTCGAGGAGGATGAAAATCCTACAGTTGACGTGGAGAT
GCAGCAGCGGCCTGTCACTCCTCCCCCGCAATCCACTGTTGCAACTCCGC
CGTCCCCCGGGGCTACGATGCGGTCACTGCGTTCGCGATCCAAGCGAGAT
GGTCCCGAGCATAGCGAGACACCCACGGCCTCCGAAACCAAGAAAAAGCG
CGTCAGTCCGTTTGACGGCTGGCTCCGCAAAAAGACAGCTCCTGCTCTGA
CAGGGACCAAAGCCAAGAAGCGAGATGCCGAAGCCGCTGGCAGCCCTGGT
GGCCCAGCTCCCAAGAAGACCCGAGGCAACAAAGCGACTGCGTCGTGAAT
GGCCACAACACCACCACCGCCCTCCACGCTACGAATCCCACCTACTCCGC
GACTTGGAGCTAAATACGATGATTATGAGCCATATTCGACACGATACTCA
GCCAGGCTAGCGAGCCAACGCGCTGCCAGAGACAGAGAGTCTCGAACCAC
TCCCCCGCCTAGCTTCCCGAGCTCGAAGACTGCGAACAAGTACGACATGA
ATGAATCCGACACTCTGTCCCCTCCTGGCTCAGTCCAAACCTCGCCCCGG
AAGCTCAAGTCGGCCCGGGCTACTGGCTTGTTCGCGACACATTCACTTGA
AGGCCCCTCCGGCACAAATGACTCCGATCCCTTCGGCGCAGGACCTTCCT
CTCTCCGTCATCAATCGCGATCACTTCGACCGACTATGACCGAAGGAATG
CTTCCCACTCCTGCCAAGACGCCTCGCAAGAAGGCTGTCGCGGATGTTGG
AAACACCGCACGAGTGCTGTTTCCCCCTCCTAGTGCCAGGAAGAAGACGA
AGAAACACACGGGCTTTTCATTGGATAGTTTTTGCGAAGACGACACACAG
GGTGGCTCAGAGATTCAGATTTACACCGACTCGCGCGATCGCATCCCGGA
AGTCGACAAAAGCGAAGATAATCCGTTCTACAACAAACCTACGGCCAGCA
ACACAACTACTCGTGCTTCCAGACGCAAAGAGACCCGCCGCGACAAGGAG
ATAGACGACTCGCTTAATCGTGAGGATGGCATGCTTTACGTTTTTCGAGG
CAAGAAAATGTTTCGCAAGTTCACGGATGATGCTGAGAGCGACCTTGATG
ATGACGATGATGACTTGGGCTTGCTGGCAGCCCGTCCAGACCTGATCGAC
TCATCTATCGACACTGTTCGTCCACTCACTCGCTCGTCAATCAAGCCTCG
CGTGCTCTTCCCTACCGCGAGGTCTCAGACCCCTCAAGAATCTCGTTCGA
GCGATGTCGATGAGGAGGCGGCCACTGATATTGAGGACCATCTACTTCAC
GATGAGGTCGAGGAGGATGAAAATCCTACAGTTGACGTGGAGATGCAGCA
GCGGCCTGTCACTCCTCCCCCGCAATCCACTGTTGCAACTCCGCCGTCCC
CCGGGGCTACGATGCGGTCACTGCGTTCGCGATCCAAGCGAGATGGTCCC
GAGCATAGCGAGACACCCACGGCCTCCGAAACCAAGAAAAAGCGCGTCAG
TCCGTTTGACGGCTGGCTCCGCAAAAAGACAGCTCCTGCTCTGACAGGGA
CCAAAGCCAAGAAGCGAGATGCCGAAGCCGCTGGCAGCCCTGGTGGCCCA
GCTCCCAAGAAGACCCGAGGCAACAAAGCGACTGCGTCGTGAATGGCCAC
AACACCACCACCGCCCTCCACGCTACGAATCCCACCTACTCCGCGACTTG
GAGCTAAATACGATGATTATGAGCCATATTCGACACGATACTCAGCCAGG
CTAGCGAGCCAACGCGCTGCCAGAGACAGAGAGTCTCGAACCACTCCCCC
GCCTAGCTTCCCGAGCTCGAAGACTGCGAACAAGTACGACATGAATGAAT
CCGACACTCTGTCCCCTCCTGGCTCAGTCCAAACCTCGCCCCGGAAGCTC
AAGTCGGCCCGGGCTACTGGCTTGTTCGCGACACATTCACTTGAAGGCCC
CTCCGGCACAAATGACTCCGATCCCTTCGGCGCAGGACCTTCCTCTCTCC
GTCATCAATCGCGATCACTTCGACCGACTATGACCGAAGGAATGCTTCCC
ACTCCTGCCAAGACGCCTCGCAAGAAGGCTGTCGCGGATGTTGGAAACAC
CGCACGAGTGCTGTTTCCCCCTCCTAGTGCCAGGAAGAAGACGAAGAAAC
ACACGGGCTTTTCATTGGATAGTTTTTGCGAAGACGACACACAGGGTGGC
TCAGAGATTCAGATTTACACCGACTCGCGCGATCGCATCCCGGAAGTCGA
CAAAAGCGAAGATAATCCGTTCTACAACAAACCTACGGCCAGCAACACAA
CTACTCGTGCTTCCAGACGCAAAGAGACCCGCCGCGACAAGGAGATAGAC
GACTCGCTTAATCGTGAGGATGGCATGCTTTACGTTTT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007382-T1.utr3p1 | KJC3_007382-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007382-T1.utr5p1 | KJC3_007382-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2296770..2299272 - |
|
