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KJC3_007405-T1, KJC3_007405-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007405-T1
Unique NameKJC3_007405-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2371461..2374064+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007405-T1 ID=KJC3_007405-T1|Name=KJC3_007405-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2604bp|location=Sequence derived from alignment at ch5:2371461..2374064+ (Aspergillus niger KJC3)
TGACCCGGTCGATTCGCCCTCAAAACTCTCCTTTCTCCCTCGTCTCTTCT
CTGATCCTGCTGTCTCGCTCTCTTTGCCCAGCGCTTCCCTGGATTCCCCG
TGCTGCCGCTCTCCTTCTCCCGCTCAACCGGCTCTCCGTTACCTTCTAAC
CCTCTTCCAGTCCCGATTGTGTGTGTGTCTCCGCGCGCGCGAAGGCCAGC
TTCCATCTGAGAGCTACTGGTTGTCTGGTTCAGCTGTCCCCTCAGCGTAC
CAAACTATCCTCTCCTTGCTTCCCTAATCAATCAGGCCCACCGTTACCTT
CTGGAACCGTTCTATGGTCCTCGCATTCCCCGGATAAACACCAGGAACTA
TCTCTCTGCTGAATACCACCGCCATCCAACTGCCAGCGTTAAATTGCCCA
GGATAACGACCCGTTTGACCCCTCAAGGATCCGTTTCCATTTCAGTCGCC
TGTACCATCACTGAATCAAAATCTTCTTGTTTGGGCCACATTCCCGCAAG
GCCAGAAGTATTGCGATTGCGATTTGCTTGTTAGTCCGCCTGGACGGATT
TCGCCTCGACCAATTGTGTGTGCTGTGCTAGTCTTACCTCTTTCACCATC
TACTATCCGCCATGACTGAAGTCTCGTCCACCCGACTCTATCTCGGGAAC
CTCCCCCGCAATGGTATGAAGCCATCTACAAAGTCTCCTTAGGTCTCCTT
GTTTTCTCTTCAACCCGCTCTGGATGTTACCCTTCTTGTCCACCTCTATC
TTCGACACAAAGATCGGGATGTTCCGCTGGATCGTCATGCGTCTGGATTG
ACCTCCCTGAGTCACCGAGATTCCCCCTCCCCTCGGGAGATTGACGGCGG
ATTTTCCTTCATTTTGTTTCAATCTTCCTTGCTTGTATCACGGTAATCTC
AGTGTTCCGGATACCGGGTTGGCAGCTTCGAACTCAAAAATCAAGTTGTC
TCGGTTGTTTGTTCCTTCAAGTCCATTCGCAGTAAGCTGACATTTTACTC
ACGGCGCCCCTGTTGGGCGCCATTAGTGGGGTTTCTTTTACAGTGACCAA
ACAGGATATCGAGGAGCATTTCAGCACCCATGGTTCCGGAAAGATTACAG
AGATCAAGCTCATGAATGGCTTCGGTTTCATTGAATATGAGGATGCGATG
GATGCTAGAGATGTTGTACCCGGTAAGTCACCCTATTATGCGCCCTAGCT
GTCGCGGGAGCCTGCTAACGTAGGACGATTATCTAGCCTTCCGTATGTAC
CAACGCAAGCACCAGTTTGAAAGATCTTCATGGTTGACATAACCCCTCAT
GCAGACGGTAGTGATTTCAAAGGCGAGCGCCTCACCGTGCAATTTGCCCG
TGGACCGCGCCGCAAGGAGAACTTCCCTGGCCCAATGGACCGTCCCAATA
TGCCTCGTCCGCGTCGCACGATCTTTCGCATGATGGTTTCTGGACTCCCG
GAAACAAGTTGGCAGGTTAGCAGCCCAAGTCCCCTTTCTTCTGGATCCAC
CGGACGCCTTGCATCTCGGCCGATTTGCGTTCCCTGATTCATTTTTGCCC
TGTACTCCATTCTATGTTCTTCCACCGACGGCCCAAGGGAATCCTGGCGA
CGATGATCAGCTCCTCTTGATGTATGGGTCGTTCACCAACCAACTTTCGG
ACCCCACCTAACTGAAAGGAAGGCTGGATGGCTGCCTCCCATGATCGAAC
CCCAGCTCTGAGTGCTGAGAACCGAGGCCGGACAACCCCGTCCAGAATGG
AACGGCCCCGCAGTCATTGAAGGATCCCTTCGCCTACTACCCTGCATTGC
TTGGGTCCTTTCCTGGCCTGTTTTTCCATCTTGTATTTTTCTACTTGCGG
GCACCCGGACACATCGGATACCACTGTACCACTTTTGCACCTGGATATGG
ACTCACACCCTGGGGTTATCTAGGATCTTAAAGACTTTGCACGTCAATCT
GGCTTGGACGTGGTTTACTCTGAAACTGGCCGTGAACTCGGCAGAGGGTG
GGTTAATCCTTCAACTTTCTATCCGGTCGGACAGGGCCCCATTGACACAT
GCTCCCAAGATTCGTGGAATTTGAAACCGCCAACGACCTGAAGACGGCCA
TTGAGAAACTGGATGGACGTGAATTCAAAGGCTCCCGCGTCACTTGCATT
GCCGATGTAAGCAACTTTACTGGTACCTGTGATCTGAGTGGAACGAGAAT
TCTCATACCCTTCCTAGATTCAAACTTACCCGGATGAACGTGCCATTCGT
GACCCGTACCGGTCTCGATCCCCGCGTCGGAGCTACCCTCCCATGGATGA
ATATGACCGGCGGTTCCCTGCGCCACGGGGATACAGCCCCCGGGCTCACT
ATCGGGAACGCTCCCCCATTCCAATCCGGAGGGACTATTATGACCGGGAT
GGATATGGACGTCGTACTCCCCCCCGCCCTCGGATGGAAGACTACCCTCC
CCCGCGTCGTCCCTACGATGACCCGTACGATGTCCGCCCGCCACCACCAC
CTCGCCATTATGACGACCCCTACGCACCCCCTCGCCCTTATGGACGGCCT
CGCAGTCCACCTCGGGGCGAGTACATGCCTTACGACCGCCGCGGATACTG
GTAG
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Coding sequence (CDS) from alignment at ch5:2371461..2374064+

>KJC3_007405-T1 ID=KJC3_007405-T1|Name=KJC3_007405-T1|organism=Aspergillus niger KJC3|type=CDS|length=4716bp|location=Sequence derived from alignment at ch5:2371461..2374064+ (Aspergillus niger KJC3)
ATGAATGGCTTCGGTTTCATTGAATATGAGGATGCGATGGATGCTAGAGA
TGTTGTACCCGCCTTCCACGGTAGTGATTTCAAAGGCGAGCGCCTCACCG
TGCAATTTGCCCGTGGACCGCGCCGCAAGGAGAACTTCCCTGGCCCAATG
GACCGTCCCAATATGCCTCGTCCGCGTCGCACGATCTTTCGCATGATGGT
TTCTGGACTCCCGGAAACAAGTTGGCAGGATCTTAAAGACTTTGCACGTC
AATCTGGCTTGGACGTGGTTTACTCTGAAACTGGCCGTGAACTCGGCAGA
GGATTCGTGGAATTTGAAACCGCCAACGACCTGAAGACGGCCATTGAGAA
ACTGGATGGACGTGAATTCAAAGGCTCCCGCGTCACTTGCATTGCCGATA
TTCAAACTTACCCGGATGAACGTGCCATTCGTGACCCGTACCGGTCTCGA
TCCCCGCGTCGGAGCTACCCTCCCATGGATGAATATGACCGGCGGTTCCC
TGCGCCACGGGGATACAGCCCCCGGGCTCACTATCGGGAACGCTCCCCCA
TTCCAATCCGGAGGGACTATTATGACCGGGATGGATATGGACGTCGTACT
CCCCCCCGCCCTCGGATGGAAGACTACCCTCCCCCGCGTCGTCCCTACGA
TGACCCGTACGATGTCCGCCCGCCACCACCACCTCGCCATTATGACGACC
CCTACGCACCCCCTCGCCCTTATGGACGGCCTCGCAGTCCACCTCGGGGC
GAGTACATGCCTTACGACCGCCGCGGATACTGGTAGATGAATGGCTTCGG
TTTCATTGAATATGAGGATGCGATGGATGCTAGAGATGTTGTACCCGCCT
TCCACGGTAGTGATTTCAAAGGCGAGCGCCTCACCGTGCAATTTGCCCGT
GGACCGCGCCGCAAGGAGAACTTCCCTGGCCCAATGGACCGTCCCAATAT
GCCTCGTCCGCGTCGCACGATCTTTCGCATGATGGTTTCTGGACTCCCGG
AAACAAGTTGGCAGGATCTTAAAGACTTTGCACGTCAATCTGGCTTGGAC
GTGGTTTACTCTGAAACTGGCCGTGAACTCGGCAGAGGATTCGTGGAATT
TGAAACCGCCAACGACCTGAAGACGGCCATTGAGAAACTGGATGGACGTG
AATTCAAAGGCTCCCGCGTCACTTGCATTGCCGATATTCAAACTTACCCG
GATGAACGTGCCATTCGTGACCCGTACCGGTCTCGATCCCCGCGTCGGAG
CTACCCTCCCATGGATGAATATGACCGGCGGTTCCCTGCGCCACGGGGAT
ACAGCCCCCGGGCTCACTATCGGGAACGCTCCCCCATTCCAATCCGGAGG
GACTATTATGACCGGGATGGATATGGACGTCGTACTCCCCCCCGCCCTCG
GATGGAAGACTACCCTCCCCCGCGTCGTCCCTACGATGACCCGTACGATG
TCCGCCCGCCACCACCACCTCGCCATTATGACGACCCCTACGCACCCCCT
CGCCCTTATGGACGGCCTCGCAGTCCACCTCGGGGCGAGTACATGCCTTA
CGACCGCCGCGGATACTGGTAGATGAATGGCTTCGGTTTCATTGAATATG
AGGATGCGATGGATGCTAGAGATGTTGTACCCGCCTTCCACGGTAGTGAT
TTCAAAGGCGAGCGCCTCACCGTGCAATTTGCCCGTGGACCGCGCCGCAA
GGAGAACTTCCCTGGCCCAATGGACCGTCCCAATATGCCTCGTCCGCGTC
GCACGATCTTTCGCATGATGGTTTCTGGACTCCCGGAAACAAGTTGGCAG
GATCTTAAAGACTTTGCACGTCAATCTGGCTTGGACGTGGTTTACTCTGA
AACTGGCCGTGAACTCGGCAGAGGATTCGTGGAATTTGAAACCGCCAACG
ACCTGAAGACGGCCATTGAGAAACTGGATGGACGTGAATTCAAAGGCTCC
CGCGTCACTTGCATTGCCGATATTCAAACTTACCCGGATGAACGTGCCAT
TCGTGACCCGTACCGGTCTCGATCCCCGCGTCGGAGCTACCCTCCCATGG
ATGAATATGACCGGCGGTTCCCTGCGCCACGGGGATACAGCCCCCGGGCT
CACTATCGGGAACGCTCCCCCATTCCAATCCGGAGGGACTATTATGACCG
GGATGGATATGGACGTCGTACTCCCCCCCGCCCTCGGATGGAAGACTACC
CTCCCCCGCGTCGTCCCTACGATGACCCGTACGATGTCCGCCCGCCACCA
CCACCTCGCCATTATGACGACCCCTACGCACCCCCTCGCCCTTATGGACG
GCCTCGCAGTCCACCTCGGGGCGAGTACATGCCTTACGACCGCCGCGGAT
ACTGGTAGATGAATGGCTTCGGTTTCATTGAATATGAGGATGCGATGGAT
GCTAGAGATGTTGTACCCGCCTTCCACGGTAGTGATTTCAAAGGCGAGCG
CCTCACCGTGCAATTTGCCCGTGGACCGCGCCGCAAGGAGAACTTCCCTG
GCCCAATGGACCGTCCCAATATGCCTCGTCCGCGTCGCACGATCTTTCGC
ATGATGGTTTCTGGACTCCCGGAAACAAGTTGGCAGGATCTTAAAGACTT
TGCACGTCAATCTGGCTTGGACGTGGTTTACTCTGAAACTGGCCGTGAAC
TCGGCAGAGGATTCGTGGAATTTGAAACCGCCAACGACCTGAAGACGGCC
ATTGAGAAACTGGATGGACGTGAATTCAAAGGCTCCCGCGTCACTTGCAT
TGCCGATATTCAAACTTACCCGGATGAACGTGCCATTCGTGACCCGTACC
GGTCTCGATCCCCGCGTCGGAGCTACCCTCCCATGGATGAATATGACCGG
CGGTTCCCTGCGCCACGGGGATACAGCCCCCGGGCTCACTATCGGGAACG
CTCCCCCATTCCAATCCGGAGGGACTATTATGACCGGGATGGATATGGAC
GTCGTACTCCCCCCCGCCCTCGGATGGAAGACTACCCTCCCCCGCGTCGT
CCCTACGATGACCCGTACGATGTCCGCCCGCCACCACCACCTCGCCATTA
TGACGACCCCTACGCACCCCCTCGCCCTTATGGACGGCCTCGCAGTCCAC
CTCGGGGCGAGTACATGCCTTACGACCGCCGCGGATACTGGTAGATGAAT
GGCTTCGGTTTCATTGAATATGAGGATGCGATGGATGCTAGAGATGTTGT
ACCCGCCTTCCACGGTAGTGATTTCAAAGGCGAGCGCCTCACCGTGCAAT
TTGCCCGTGGACCGCGCCGCAAGGAGAACTTCCCTGGCCCAATGGACCGT
CCCAATATGCCTCGTCCGCGTCGCACGATCTTTCGCATGATGGTTTCTGG
ACTCCCGGAAACAAGTTGGCAGGATCTTAAAGACTTTGCACGTCAATCTG
GCTTGGACGTGGTTTACTCTGAAACTGGCCGTGAACTCGGCAGAGGATTC
GTGGAATTTGAAACCGCCAACGACCTGAAGACGGCCATTGAGAAACTGGA
TGGACGTGAATTCAAAGGCTCCCGCGTCACTTGCATTGCCGATATTCAAA
CTTACCCGGATGAACGTGCCATTCGTGACCCGTACCGGTCTCGATCCCCG
CGTCGGAGCTACCCTCCCATGGATGAATATGACCGGCGGTTCCCTGCGCC
ACGGGGATACAGCCCCCGGGCTCACTATCGGGAACGCTCCCCCATTCCAA
TCCGGAGGGACTATTATGACCGGGATGGATATGGACGTCGTACTCCCCCC
CGCCCTCGGATGGAAGACTACCCTCCCCCGCGTCGTCCCTACGATGACCC
GTACGATGTCCGCCCGCCACCACCACCTCGCCATTATGACGACCCCTACG
CACCCCCTCGCCCTTATGGACGGCCTCGCAGTCCACCTCGGGGCGAGTAC
ATGCCTTACGACCGCCGCGGATACTGGTAGATGAATGGCTTCGGTTTCAT
TGAATATGAGGATGCGATGGATGCTAGAGATGTTGTACCCGCCTTCCACG
GTAGTGATTTCAAAGGCGAGCGCCTCACCGTGCAATTTGCCCGTGGACCG
CGCCGCAAGGAGAACTTCCCTGGCCCAATGGACCGTCCCAATATGCCTCG
TCCGCGTCGCACGATCTTTCGCATGATGGTTTCTGGACTCCCGGAAACAA
GTTGGCAGGATCTTAAAGACTTTGCACGTCAATCTGGCTTGGACGTGGTT
TACTCTGAAACTGGCCGTGAACTCGGCAGAGGATTCGTGGAATTTGAAAC
CGCCAACGACCTGAAGACGGCCATTGAGAAACTGGATGGACGTGAATTCA
AAGGCTCCCGCGTCACTTGCATTGCCGATATTCAAACTTACCCGGATGAA
CGTGCCATTCGTGACCCGTACCGGTCTCGATCCCCGCGTCGGAGCTACCC
TCCCATGGATGAATATGACCGGCGGTTCCCTGCGCCACGGGGATACAGCC
CCCGGGCTCACTATCGGGAACGCTCCCCCATTCCAATCCGGAGGGACTAT
TATGACCGGGATGGATATGGACGTCGTACTCCCCCCCGCCCTCGGATGGA
AGACTACCCTCCCCCGCGTCGTCCCTACGATGACCCGTACGATGTCCGCC
CGCCACCACCACCTCGCCATTATGACGACCCCTACGCACCCCCTCGCCCT
TATGGACGGCCTCGCAGTCCACCTCGGGGCGAGTACATGCCTTACGACCG
CCGCGGATACTGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007405KJC3_007405Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007405-T1KJC3_007405-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007405-T1.utr5p1KJC3_007405-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007405-T1.exon1KJC3_007405-T1.exon1Aspergillus niger KJC3exon
KJC3_007405-T1.exon2KJC3_007405-T1.exon2Aspergillus niger KJC3exon
KJC3_007405-T1.exon3KJC3_007405-T1.exon3Aspergillus niger KJC3exon
KJC3_007405-T1.exon4KJC3_007405-T1.exon4Aspergillus niger KJC3exon
KJC3_007405-T1.exon5KJC3_007405-T1.exon5Aspergillus niger KJC3exon
KJC3_007405-T1.exon6KJC3_007405-T1.exon6Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007405-T1.cdsKJC3_007405-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2371461..2374064 +
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