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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2593033..2595169- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007476-T1 ID=KJC3_007476-T1|Name=KJC3_007476-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2137bp|location=Sequence derived from alignment at ch5:2593033..2595169- (Aspergillus niger KJC3)
CCATTCCCAAGTATCTTCTCTTCTTGCACTTCCTACATGATTGAGCTCTC
CTGATTAAACCCCTACTTAAAACCCCCTTTTGGAAAGAGGTGTAGATTCG
GTAAGAATCAATCCTATACGTCATTGTTTGTTCCGTGTTCCGGTGCAATC
GAGTCCCCTTCTTGCGCCCGCAGAGACAAACAGTACAGACGGCCGGACGA
AACCAGGCAGGCTTCCGTCGTCATTCGCTCCCCGCCTTGAACCAGCCCAG
CCAGCCCTGCTTGCTTGCTCCCCCTTACGATCATTCCGTGAACAATACTT
CGATCCTTTTTCACTTCAGCCATGAGTAATACCGACTTCCTAGGGAGGGC
GATTGACACCGTCAAAAAGGCCATCGAGCACGACAATGAGGGCGAATACG
AGAAGGCTTATCAGCTGTATTACTCGGCACTGGAGCTGTTCATGCTGGCA
CTGAAATGGGAGAAGAACCCCAAGTCCAAGGAGATGATCCGCGCAAAGGC
CGGCGAGTACATGGATCGTGCGGAGAAACTCAAGAATCACCTGGCTACTC
TAGATAATCGAAAAAAGCCGAGTGCGGTGGGCGCTAACGGCAAGGTGGCG
CAAGGAAGTGGGAAGGGAGGGTATGTACATGTCTCCCGGCATCCGATCAC
TTTTGGCCCAGAGAGCATTGTATGCTAACACTCCTTGGTGAATTAGAAAC
CAGGACGAAGATGGCGAGGACGCCGACTCGAAGAAGCTACGGTCCGCCCT
TGCTGGGGCGATCTTGTCGGATAAACCCAATGTGCAGTGGGAGGATGTTG
CCGGTCTGGAGAGCGCAAAGGAGGCATTGAAGGAAGCGGTCATTCTACCG
ATCAAGTTCCCACACCTCTTTACGGGGAAGCGCCAACCGTGGAAGGGTAT
CTTGCTGTATGGGCCCCCGGGTACGGGAAAGTCATATCTCGCCAAGGCTG
TTGCGACGGAGGCGAACAGCACATTCTTCAGTGTTAGTAGTAGTGACTTG
GTGTCGAAGTGGATGGGTGAGAGTGAAAGGTATGGATCAATCGGTGATCT
TATGTTGCCACATGTCGGTTCCCAGAGCTAACATGCCTCTACAGGCTTGT
GAAGCAGCTCTTCAACATGGCGCGAGAAAACAAGCCGGCGATTATCTTCA
TTGACGAAGTCGACGCTCTTTGCGGCCCTCGTGGCGAAGGTGAATCAGAG
GCATCTCGTCGTATCAAGACGGAATTGCTCGTTCAGATGGACGGTGTTGG
CAAAGACTCAAAGGGCGTTCTGATCCTCGGCGCAACGAACATTCCCTGGC
AACTGGATGCAGCCATTCGTCGTCGATTCCAGCGTCGAGTCCACATCAGT
CTCCCCGATATCAACGCACGAATGAAGATGTTCATGCTGGCTGTCGGCTC
CACGCCCTGCGAGTTGACGCAAGCCGACTACCGAACCCTGGCAGAGATGA
GCGAGGGCTACTCCGGTAGCGATATTAGCATTGCTGTGCAGGATGCGCTG
ATGCAGCCAATCCGCAAGATCCAAACAGCAACGCACTACAAGAAGGTAAG
CCCTCCAGTCATGCATATTCCTAGGGAAGACAACACTAACCACAAATCCA
GGTCATCCTCGACGGTGCCGAAAAGCTAACCCCCTGCTCACCGGGCGACC
AAGGCGCAATGGAAATGTCATGGACCACCGTAGAAGCCGACCAACTCCTG
GAACCCCCGCTCGTCCTGAAAGACTTCATCAAGGCGGTTCGTAACTCCCG
ACCAACCGTCAGTCAAGAAGACCTGCAACGAAACTCCGAATGGACCAAGG
AATTCGGCAGCGAGGGTGCTTAATTCAAGATCCATCCCAAACTTAACCAC
ATCCATCTTCTCACATTTAGAAGAAGACAAACGAGTCCATCCATCATCCT
CTCGTTTGCCTCATCACGACCCGATAGAATCAACCAGGCTTCATAAAGTC
AAGCTTTCTTTCCCATCCGTCCCCATTATTCGGATATCCTTTTTCCCCCT
CCCGATATTGACTCGGTCGACATGATTTGGCATGCATGGATATTAAACGC
TCAATTGGAATGAAGGGACGAACGAACGAACGAACGAAAGAAAAGAAAAT
CCACGACCACACACGCTTCCATGTGCTTTACTACATA back to topCoding sequence (CDS) from alignment at ch5:2593033..2595169- >KJC3_007476-T1 ID=KJC3_007476-T1|Name=KJC3_007476-T1|organism=Aspergillus niger KJC3|type=CDS|length=5220bp|location=Sequence derived from alignment at ch5:2593033..2595169- (Aspergillus niger KJC3)
GTCATCCTCGACGGTGCCGAAAAGCTAACCCCCTGCTCACCGGGCGACCA
AGGCGCAATGGAAATGTCATGGACCACCGTAGAAGCCGACCAACTCCTGG
AACCCCCGCTCGTCCTGAAAGACTTCATCAAGGCGGTTCGTAACTCCCGA
CCAACCGTCAGTCAAGAAGACCTGCAACGAAACTCCGAATGGACCAAGGA
ATTCGGCAGCGAGGGTGCTTAAGCTTGTGAAGCAGCTCTTCAACATGGCG
CGAGAAAACAAGCCGGCGATTATCTTCATTGACGAAGTCGACGCTCTTTG
CGGCCCTCGTGGCGAAGGTGAATCAGAGGCATCTCGTCGTATCAAGACGG
AATTGCTCGTTCAGATGGACGGTGTTGGCAAAGACTCAAAGGGCGTTCTG
ATCCTCGGCGCAACGAACATTCCCTGGCAACTGGATGCAGCCATTCGTCG
TCGATTCCAGCGTCGAGTCCACATCAGTCTCCCCGATATCAACGCACGAA
TGAAGATGTTCATGCTGGCTGTCGGCTCCACGCCCTGCGAGTTGACGCAA
GCCGACTACCGAACCCTGGCAGAGATGAGCGAGGGCTACTCCGGTAGCGA
TATTAGCATTGCTGTGCAGGATGCGCTGATGCAGCCAATCCGCAAGATCC
AAACAGCAACGCACTACAAGAAGAAACCAGGACGAAGATGGCGAGGACGC
CGACTCGAAGAAGCTACGGTCCGCCCTTGCTGGGGCGATCTTGTCGGATA
AACCCAATGTGCAGTGGGAGGATGTTGCCGGTCTGGAGAGCGCAAAGGAG
GCATTGAAGGAAGCGGTCATTCTACCGATCAAGTTCCCACACCTCTTTAC
GGGGAAGCGCCAACCGTGGAAGGGTATCTTGCTGTATGGGCCCCCGGGTA
CGGGAAAGTCATATCTCGCCAAGGCTGTTGCGACGGAGGCGAACAGCACA
TTCTTCAGTGTTAGTAGTAGTGACTTGGTGTCGAAGTGGATGGGTGAGAG
TGAAAGATGAGTAATACCGACTTCCTAGGGAGGGCGATTGACACCGTCAA
AAAGGCCATCGAGCACGACAATGAGGGCGAATACGAGAAGGCTTATCAGC
TGTATTACTCGGCACTGGAGCTGTTCATGCTGGCACTGAAATGGGAGAAG
AACCCCAAGTCCAAGGAGATGATCCGCGCAAAGGCCGGCGAGTACATGGA
TCGTGCGGAGAAACTCAAGAATCACCTGGCTACTCTAGATAATCGAAAAA
AGCCGAGTGCGGTGGGCGCTAACGGCAAGGTGGCGCAAGGAAGTGGGAAG
GGAGGGTCATCCTCGACGGTGCCGAAAAGCTAACCCCCTGCTCACCGGGC
GACCAAGGCGCAATGGAAATGTCATGGACCACCGTAGAAGCCGACCAACT
CCTGGAACCCCCGCTCGTCCTGAAAGACTTCATCAAGGCGGTTCGTAACT
CCCGACCAACCGTCAGTCAAGAAGACCTGCAACGAAACTCCGAATGGACC
AAGGAATTCGGCAGCGAGGGTGCTTAAGCTTGTGAAGCAGCTCTTCAACA
TGGCGCGAGAAAACAAGCCGGCGATTATCTTCATTGACGAAGTCGACGCT
CTTTGCGGCCCTCGTGGCGAAGGTGAATCAGAGGCATCTCGTCGTATCAA
GACGGAATTGCTCGTTCAGATGGACGGTGTTGGCAAAGACTCAAAGGGCG
TTCTGATCCTCGGCGCAACGAACATTCCCTGGCAACTGGATGCAGCCATT
CGTCGTCGATTCCAGCGTCGAGTCCACATCAGTCTCCCCGATATCAACGC
ACGAATGAAGATGTTCATGCTGGCTGTCGGCTCCACGCCCTGCGAGTTGA
CGCAAGCCGACTACCGAACCCTGGCAGAGATGAGCGAGGGCTACTCCGGT
AGCGATATTAGCATTGCTGTGCAGGATGCGCTGATGCAGCCAATCCGCAA
GATCCAAACAGCAACGCACTACAAGAAGAAACCAGGACGAAGATGGCGAG
GACGCCGACTCGAAGAAGCTACGGTCCGCCCTTGCTGGGGCGATCTTGTC
GGATAAACCCAATGTGCAGTGGGAGGATGTTGCCGGTCTGGAGAGCGCAA
AGGAGGCATTGAAGGAAGCGGTCATTCTACCGATCAAGTTCCCACACCTC
TTTACGGGGAAGCGCCAACCGTGGAAGGGTATCTTGCTGTATGGGCCCCC
GGGTACGGGAAAGTCATATCTCGCCAAGGCTGTTGCGACGGAGGCGAACA
GCACATTCTTCAGTGTTAGTAGTAGTGACTTGGTGTCGAAGTGGATGGGT
GAGAGTGAAAGATGAGTAATACCGACTTCCTAGGGAGGGCGATTGACACC
GTCAAAAAGGCCATCGAGCACGACAATGAGGGCGAATACGAGAAGGCTTA
TCAGCTGTATTACTCGGCACTGGAGCTGTTCATGCTGGCACTGAAATGGG
AGAAGAACCCCAAGTCCAAGGAGATGATCCGCGCAAAGGCCGGCGAGTAC
ATGGATCGTGCGGAGAAACTCAAGAATCACCTGGCTACTCTAGATAATCG
AAAAAAGCCGAGTGCGGTGGGCGCTAACGGCAAGGTGGCGCAAGGAAGTG
GGAAGGGAGGGTCATCCTCGACGGTGCCGAAAAGCTAACCCCCTGCTCAC
CGGGCGACCAAGGCGCAATGGAAATGTCATGGACCACCGTAGAAGCCGAC
CAACTCCTGGAACCCCCGCTCGTCCTGAAAGACTTCATCAAGGCGGTTCG
TAACTCCCGACCAACCGTCAGTCAAGAAGACCTGCAACGAAACTCCGAAT
GGACCAAGGAATTCGGCAGCGAGGGTGCTTAAGCTTGTGAAGCAGCTCTT
CAACATGGCGCGAGAAAACAAGCCGGCGATTATCTTCATTGACGAAGTCG
ACGCTCTTTGCGGCCCTCGTGGCGAAGGTGAATCAGAGGCATCTCGTCGT
ATCAAGACGGAATTGCTCGTTCAGATGGACGGTGTTGGCAAAGACTCAAA
GGGCGTTCTGATCCTCGGCGCAACGAACATTCCCTGGCAACTGGATGCAG
CCATTCGTCGTCGATTCCAGCGTCGAGTCCACATCAGTCTCCCCGATATC
AACGCACGAATGAAGATGTTCATGCTGGCTGTCGGCTCCACGCCCTGCGA
GTTGACGCAAGCCGACTACCGAACCCTGGCAGAGATGAGCGAGGGCTACT
CCGGTAGCGATATTAGCATTGCTGTGCAGGATGCGCTGATGCAGCCAATC
CGCAAGATCCAAACAGCAACGCACTACAAGAAGAAACCAGGACGAAGATG
GCGAGGACGCCGACTCGAAGAAGCTACGGTCCGCCCTTGCTGGGGCGATC
TTGTCGGATAAACCCAATGTGCAGTGGGAGGATGTTGCCGGTCTGGAGAG
CGCAAAGGAGGCATTGAAGGAAGCGGTCATTCTACCGATCAAGTTCCCAC
ACCTCTTTACGGGGAAGCGCCAACCGTGGAAGGGTATCTTGCTGTATGGG
CCCCCGGGTACGGGAAAGTCATATCTCGCCAAGGCTGTTGCGACGGAGGC
GAACAGCACATTCTTCAGTGTTAGTAGTAGTGACTTGGTGTCGAAGTGGA
TGGGTGAGAGTGAAAGATGAGTAATACCGACTTCCTAGGGAGGGCGATTG
ACACCGTCAAAAAGGCCATCGAGCACGACAATGAGGGCGAATACGAGAAG
GCTTATCAGCTGTATTACTCGGCACTGGAGCTGTTCATGCTGGCACTGAA
ATGGGAGAAGAACCCCAAGTCCAAGGAGATGATCCGCGCAAAGGCCGGCG
AGTACATGGATCGTGCGGAGAAACTCAAGAATCACCTGGCTACTCTAGAT
AATCGAAAAAAGCCGAGTGCGGTGGGCGCTAACGGCAAGGTGGCGCAAGG
AAGTGGGAAGGGAGGGTCATCCTCGACGGTGCCGAAAAGCTAACCCCCTG
CTCACCGGGCGACCAAGGCGCAATGGAAATGTCATGGACCACCGTAGAAG
CCGACCAACTCCTGGAACCCCCGCTCGTCCTGAAAGACTTCATCAAGGCG
GTTCGTAACTCCCGACCAACCGTCAGTCAAGAAGACCTGCAACGAAACTC
CGAATGGACCAAGGAATTCGGCAGCGAGGGTGCTTAAGCTTGTGAAGCAG
CTCTTCAACATGGCGCGAGAAAACAAGCCGGCGATTATCTTCATTGACGA
AGTCGACGCTCTTTGCGGCCCTCGTGGCGAAGGTGAATCAGAGGCATCTC
GTCGTATCAAGACGGAATTGCTCGTTCAGATGGACGGTGTTGGCAAAGAC
TCAAAGGGCGTTCTGATCCTCGGCGCAACGAACATTCCCTGGCAACTGGA
TGCAGCCATTCGTCGTCGATTCCAGCGTCGAGTCCACATCAGTCTCCCCG
ATATCAACGCACGAATGAAGATGTTCATGCTGGCTGTCGGCTCCACGCCC
TGCGAGTTGACGCAAGCCGACTACCGAACCCTGGCAGAGATGAGCGAGGG
CTACTCCGGTAGCGATATTAGCATTGCTGTGCAGGATGCGCTGATGCAGC
CAATCCGCAAGATCCAAACAGCAACGCACTACAAGAAGAAACCAGGACGA
AGATGGCGAGGACGCCGACTCGAAGAAGCTACGGTCCGCCCTTGCTGGGG
CGATCTTGTCGGATAAACCCAATGTGCAGTGGGAGGATGTTGCCGGTCTG
GAGAGCGCAAAGGAGGCATTGAAGGAAGCGGTCATTCTACCGATCAAGTT
CCCACACCTCTTTACGGGGAAGCGCCAACCGTGGAAGGGTATCTTGCTGT
ATGGGCCCCCGGGTACGGGAAAGTCATATCTCGCCAAGGCTGTTGCGACG
GAGGCGAACAGCACATTCTTCAGTGTTAGTAGTAGTGACTTGGTGTCGAA
GTGGATGGGTGAGAGTGAAAGATGAGTAATACCGACTTCCTAGGGAGGGC
GATTGACACCGTCAAAAAGGCCATCGAGCACGACAATGAGGGCGAATACG
AGAAGGCTTATCAGCTGTATTACTCGGCACTGGAGCTGTTCATGCTGGCA
CTGAAATGGGAGAAGAACCCCAAGTCCAAGGAGATGATCCGCGCAAAGGC
CGGCGAGTACATGGATCGTGCGGAGAAACTCAAGAATCACCTGGCTACTC
TAGATAATCGAAAAAAGCCGAGTGCGGTGGGCGCTAACGGCAAGGTGGCG
CAAGGAAGTGGGAAGGGAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007476-T1.utr3p1 | KJC3_007476-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007476-T1.utr5p1 | KJC3_007476-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR036181 |
| DBxref | InterPro:IPR003960 |
| DBxref | InterPro:IPR003959 |
| DBxref | InterPro:IPR015415 |
| DBxref | InterPro:IPR003593 |
| DBxref | InterPro:IPR007330 |
| DBxref | PFAM:PF09336 |
| DBxref | PFAM:PF04212 |
| DBxref | PFAM:PF00004 |
| Product | Vacuolar protein sorting-associated protein 4 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2593033..2595169 - |
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