KJC3_007623-T1, KJC3_007623-T1 (mRNA) Aspergillus niger KJC3

Overview


Name	KJC3_007623-T1
Unique Name	KJC3_007623-T1
Type	mRNA
Organism	Aspergillus niger KJC3

Sequences

The following sequences are available for this feature:

mRNA from alignment at ch5:2969129..2972202-
coding sequence from alignment at ch5:2969129..2972202-

mRNA from alignment at ch5:2969129..2972202-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>KJC3_007623-T1 ID=KJC3_007623-T1|Name=KJC3_007623-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3074bp|location=Sequence derived from alignment at ch5:2969129..2972202- (Aspergillus niger KJC3)
GTCGCAATCCTTCCCAGAGTTGATGCCTCAATGCCTTAATCCTTCGTGCC
TTTTTGCCTTTTAATATGTTGATGCCTTGTAGCCATGTAGCCTTATGGCC
TTGTCGCCTGAGCTCCCCGCACGTGGCGGGCCCAGCCGCAGGTTCCTTTG
CGGCTTCGTTCTTCCCCGCACATTCTGGTCTTCCACCGGCAAACATAATC
ACTTTCTCTCCACTACCCCGGATCCTGTCTATCGCAGCCCAGAAATCTCC
ATCCGTTGCTTTCCCCCTCGCTCGTGACGTATTCTGCAGCCCCTAGTCCA
CTTGCTACATGCAGAAAGCCTCCAGGAGGTCGACTCCCCGGTCGCGAATA
TCCAAGGCTTGCGACCGTTGTCGTCGACAGAAGCTCAAGGTAGACTCCGA
CATTGGGGATAAGCTGGGAATAACCAACCGTGCACTATACTAATTGATTT
CAGTGTGACTCAGTTCGTCCATGTGTTCTATGCACCCGTGCTGGCCACAT
ATGCGAGACAACTACAGTATCACGTCGTCGTGTTTCCGAATACCAAACAC
CGGCCACTCCAGCGGCTTCCGCCGGATCTGAGACGCCGCAGGTCTTACCG
CGCAGAGCGTCCGAGGACCACCAACAATATGCAACGGGCACTTCAGCGAT
TGGTTTTGCCAGACAAGTTTATAATGAAGAGGAGACAGGCCGGACCTTGA
CTGAAGCTGCTGTGCCGGGTGATGTTGGCATGGCGGGTACTGATAATTCC
CTCTGGGGCCTCAAGGAGACATCCATGCCACCAAGGACTGTGATGCTAGC
ATTGATCAATGCCTACTTTGACCGAATGCAGTGGTTTATCTTGGTACTCC
ACGAGCCCTCATTCCGAGAAATGGCCCAGCCAATCATCTCTCAGCATGAA
TGGCAACGCCAGGATCTTGGTGCAGTCATGACTGTGCTTGCCGTCGCTGT
CATAAGCTTACAATCTGTCCTGCCAGACGCAGATTGGCCTGGTCATATCC
TCCTGGCTAGGCATTCGATTGATGCCCAGGATTTGCTGAACAAATTTCTG
GCCGAGATTCGTGCCCGTGTGCTTGACATGTTGGAGGACCGCCGTATCGA
AGGAGTCCAAGTCTGTCTCTTACTCTGTTGCTATTACATGTTCCACAGCT
CCCCAAACATGGCGTGGACCACGTGTGGTATGGCTTTCAGAGCTGCATAT
GCTCTGAACCTTCAAGAAACCAGTACATTGTCACAAACTTCTGTCGCTAA
TGAGACACGCTCTCGTTGTTGGAACCAGATCATCATCTCGGATACATTCT
GTTCCATTCTCTATGGACGTCCCGCTTCTCTGCCTTCTGCCAATGTTCGT
CACCTACAGCTCGTCGACGACCTGGCCATTGATCACTCGTTGTTAAACGA
TCTCTCGGTGGACAATAGCGACGGACTAACGTCGCGCGCCCCATTTCACG
TCTTGAAGACAGATGTGTATGCGATTGCTCGCGAAATTCTTATTCGATTC
CGTCGGCTTGACCTGACATCTGGAATAGACGAACAGGACTTGGAAGCTAT
CATTCGTATTACCGAAGAGTCCAACGCACTTCTCACTGACTGGTGGAAGT
CCGTCCCGAAACTGTATGACTTCGATTACTGGAAAGCAGACGGTCGATGG
GAAATGGTTGAAGGCCAGCTGCAAAGGCTTCCCTCCGAAGCAAGGCAACA
GGTGGAGACAATATATCTACAGGCTGCTGTTCTCCAGTTGACGTACGACG
GCATGGTCATCCAAGCAAATAGACCACTGTTGGAGCGAAGAATCAACAGG
CTAACATCTTCGCGGGCGATCATGGATGCGATGCATAGGGCGCTTGACCG
AGCCACGGCTGCTGCTCTCCGCATATCCCGTGTTCCAGTTCACAAGCTGA
AAAATCATTTTGCTATAGCAGTCGTATCGATGCAAGAGTTCACTGCTGGT
GTGATTCTCTGTATACCTCCCACGGTGAAGCCTTTAACGGCCACCGCTCA
TGAGGCGAAGGACGGGGTGGTAAGAATAATACGCGCCAGTCGAAGTCTCA
AGAGCCACGATCGAATAGCAAGGCAAACTGAACAACTTCTGACGGAGCTA
CTGAAAGTTACCACCCAACGCGAGATAACGCACGCCTTGGCCGATAATCT
CGACACCAATTTCCCCTCCGATACGCGGCTAACAGGCTCCGCTGTTGCCG
GCGCCTCAAATGACTCCTTAGGTGCAGGACGCTCCAGGCCAGTTCCCGGA
TCCGCAGCGCAGGCAGTTGTAGATCCTATCCAAGGAGCCTGGGACTCAGA
ATTTAATGCCCTCCCTGCCGTAACGGGACCTTATGATTTCCTCCCTGCTC
AAGCCTTTCAACAGCTGGACGATACATTTGGTGCCTTTGGAGAATGTAAT
GTCCCTTGATCACCCCAGACTCACATCCAGATTCTGACTGACCTCGTGCA
TAGCCATATTTAACTTGGTCCCTGATGATCAAAACAGTACATGGAACTGG
GGCCGAACATTTCCCTAGCCAAAGGAGCATCAAGGAGTTAACGTGATCAG
TACAGCCTTGTAGCTCGCTGTAACTGCCCTGGAGCCAAGCCAAAGCCTAG
ACCGCAAGGTGCATGGGCGAGCTTTGCGAGGATTTAGTTGTTATTTAGTA
TGCCAAGATTGAGCCACGCAGAATGGCTTATGGCCATAGTAGCAACAATG
GCCACGGAAAGTTCTTCCATGTGGTATGGGGAAAGCCGCCGGATATTTGG
GGAGGGCGTGATTGTTCCGGTGGCTATCTTCCCGGTGGAGATAACGGCGG
TGACCATCAAAACTCCTCAGCCCGGATGGCTCGGACTCCGCATCGTCAAT
TATCGGTTTCGTGACAACCATTCAACTACTTAGCAGACACAAATAGCAAT
CCCACTTACCCCGACCTTTAATAATAATTTTTAGCGGATCTATCGATCTC
AGAGACAATATTGCCATCGTTCTGTGTGGAAGGCCAGCGCCATGGTTTCA
CAATAATAATCCTCAAAATTGCCCAAAAGCTAAAGCGAAGGAAAGTCGAG
AAGCCCAGTCTAGACTGGCAGGCT

Coding sequence (CDS) from alignment at ch5:2969129..2972202-

>KJC3_007623-T1 ID=KJC3_007623-T1|Name=KJC3_007623-T1|organism=Aspergillus niger KJC3|type=CDS|length=4074bp|location=Sequence derived from alignment at ch5:2969129..2972202- (Aspergillus niger KJC3)
TGTGACTCAGTTCGTCCATGTGTTCTATGCACCCGTGCTGGCCACATATG
CGAGACAACTACAGTATCACGTCGTCGTGTTTCCGAATACCAAACACCGG
CCACTCCAGCGGCTTCCGCCGGATCTGAGACGCCGCAGGTCTTACCGCGC
AGAGCGTCCGAGGACCACCAACAATATGCAACGGGCACTTCAGCGATTGG
TTTTGCCAGACAAGTTTATAATGAAGAGGAGACAGGCCGGACCTTGACTG
AAGCTGCTGTGCCGGGTGATGTTGGCATGGCGGGTACTGATAATTCCCTC
TGGGGCCTCAAGGAGACATCCATGCCACCAAGGACTGTGATGCTAGCATT
GATCAATGCCTACTTTGACCGAATGCAGTGGTTTATCTTGGTACTCCACG
AGCCCTCATTCCGAGAAATGGCCCAGCCAATCATCTCTCAGCATGAATGG
CAACGCCAGGATCTTGGTGCAGTCATGACTGTGCTTGCCGTCGCTGTCAT
AAGCTTACAATCTGTCCTGCCAGACGCAGATTGGCCTGGTCATATCCTCC
TGGCTAGGCATTCGATTGATGCCCAGGATTTGCTGAACAAATTTCTGGCC
GAGATTCGTGCCCGTGTGCTTGACATGTTGGAGGACCGCCGTATCGAAGG
AGTCCAAGTCTGTCTCTTACTCTGTTGCTATTACATGTTCCACAGCTCCC
CAAACATGGCGTGGACCACGTGTGGTATGGCTTTCAGAGCTGCATATGCT
CTGAACCTTCAAGAAACCAGTACATTGTCACAAACTTCTGTCGCTAATGA
GACACGCTCTCGTTGTTGGAACCAGATCATCATCTCGGATACATTCTGTT
CCATTCTCTATGGACGTCCCGCTTCTCTGCCTTCTGCCAATGTTCGTCAC
CTACAGCTCGTCGACGACCTGGCCATTGATCACTCGTTGTTAAACGATCT
CTCGGTGGACAATAGCGACGGACTAACGTCGCGCGCCCCATTTCACGTCT
TGAAGACAGATGTGTATGCGATTGCTCGCGAAATTCTTATTCGATTCCGT
CGGCTTGACCTGACATCTGGAATAGACGAACAGGACTTGGAAGCTATCAT
TCGTATTACCGAAGAGTCCAACGCACTTCTCACTGACTGGTGGAAGTCCG
TCCCGAAACTGTATGACTTCGATTACTGGAAAGCAGACGGTCGATGGGAA
ATGGTTGAAGGCCAGCTGCAAAGGCTTCCCTCCGAAGCAAGGCAACAGGT
GGAGACAATATATCTACAGGCTGCTGTTCTCCAGTTGACGTACGACGGCA
TGGTCATCCAAGCAAATAGACCACTGTTGGAGCGAAGAATCAACAGGCTA
ACATCTTCGCGGGCGATCATGGATGCGATGCATAGGGCGCTTGACCGAGC
CACGGCTGCTGCTCTCCGCATATCCCGTGTTCCAGTTCACAAGCTGAAAA
ATCATTTTGCTATAGCAGTCGTATCGATGCAAGAGTTCACTGCTGGTGTG
ATTCTCTGTATACCTCCCACGGTGAAGCCTTTAACGGCCACCGCTCATGA
GGCGAAGGACGGGGTGGTAAGAATAATACGCGCCAGTCGAAGTCTCAAGA
GCCACGATCGAATAGCAAGGCAAACTGAACAACTTCTGACGGAGCTACTG
AAAGTTACCACCCAACGCGAGATAACGCACGCCTTGGCCGATAATCTCGA
CACCAATTTCCCCTCCGATACGCGGCTAACAGGCTCCGCTGTTGCCGGCG
CCTCAAATGACTCCTTAGGTGCAGGACGCTCCAGGCCAGTTCCCGGATCC
GCAGCGCAGGCAGTTGTAGATCCTATCCAAGGAGCCTGGGACTCAGAATT
TAATGCCCTCCCTGCCGTAACGGGACCTTATGATTTCCTCCCTGCTCAAG
CCTTTCAACAGCTGGACGATACATTTGGTGCCTTTGGAGAATGTAATGTC
CCTTGAATGCAGAAAGCCTCCAGGAGGTCGACTCCCCGGTCGCGAATATC
CAAGGCTTGCGACCGTTGTCGTCGACAGAAGCTCAAGTGTGACTCAGTTC
GTCCATGTGTTCTATGCACCCGTGCTGGCCACATATGCGAGACAACTACA
GTATCACGTCGTCGTGTTTCCGAATACCAAACACCGGCCACTCCAGCGGC
TTCCGCCGGATCTGAGACGCCGCAGGTCTTACCGCGCAGAGCGTCCGAGG
ACCACCAACAATATGCAACGGGCACTTCAGCGATTGGTTTTGCCAGACAA
GTTTATAATGAAGAGGAGACAGGCCGGACCTTGACTGAAGCTGCTGTGCC
GGGTGATGTTGGCATGGCGGGTACTGATAATTCCCTCTGGGGCCTCAAGG
AGACATCCATGCCACCAAGGACTGTGATGCTAGCATTGATCAATGCCTAC
TTTGACCGAATGCAGTGGTTTATCTTGGTACTCCACGAGCCCTCATTCCG
AGAAATGGCCCAGCCAATCATCTCTCAGCATGAATGGCAACGCCAGGATC
TTGGTGCAGTCATGACTGTGCTTGCCGTCGCTGTCATAAGCTTACAATCT
GTCCTGCCAGACGCAGATTGGCCTGGTCATATCCTCCTGGCTAGGCATTC
GATTGATGCCCAGGATTTGCTGAACAAATTTCTGGCCGAGATTCGTGCCC
GTGTGCTTGACATGTTGGAGGACCGCCGTATCGAAGGAGTCCAAGTCTGT
CTCTTACTCTGTTGCTATTACATGTTCCACAGCTCCCCAAACATGGCGTG
GACCACGTGTGGTATGGCTTTCAGAGCTGCATATGCTCTGAACCTTCAAG
AAACCAGTACATTGTCACAAACTTCTGTCGCTAATGAGACACGCTCTCGT
TGTTGGAACCAGATCATCATCTCGGATACATTCTGTTCCATTCTCTATGG
ACGTCCCGCTTCTCTGCCTTCTGCCAATGTTCGTCACCTACAGCTCGTCG
ACGACCTGGCCATTGATCACTCGTTGTTAAACGATCTCTCGGTGGACAAT
AGCGACGGACTAACGTCGCGCGCCCCATTTCACGTCTTGAAGACAGATGT
GTATGCGATTGCTCGCGAAATTCTTATTCGATTCCGTCGGCTTGACCTGA
CATCTGGAATAGACGAACAGGACTTGGAAGCTATCATTCGTATTACCGAA
GAGTCCAACGCACTTCTCACTGACTGGTGGAAGTCCGTCCCGAAACTGTA
TGACTTCGATTACTGGAAAGCAGACGGTCGATGGGAAATGGTTGAAGGCC
AGCTGCAAAGGCTTCCCTCCGAAGCAAGGCAACAGGTGGAGACAATATAT
CTACAGGCTGCTGTTCTCCAGTTGACGTACGACGGCATGGTCATCCAAGC
AAATAGACCACTGTTGGAGCGAAGAATCAACAGGCTAACATCTTCGCGGG
CGATCATGGATGCGATGCATAGGGCGCTTGACCGAGCCACGGCTGCTGCT
CTCCGCATATCCCGTGTTCCAGTTCACAAGCTGAAAAATCATTTTGCTAT
AGCAGTCGTATCGATGCAAGAGTTCACTGCTGGTGTGATTCTCTGTATAC
CTCCCACGGTGAAGCCTTTAACGGCCACCGCTCATGAGGCGAAGGACGGG
GTGGTAAGAATAATACGCGCCAGTCGAAGTCTCAAGAGCCACGATCGAAT
AGCAAGGCAAACTGAACAACTTCTGACGGAGCTACTGAAAGTTACCACCC
AACGCGAGATAACGCACGCCTTGGCCGATAATCTCGACACCAATTTCCCC
TCCGATACGCGGCTAACAGGCTCCGCTGTTGCCGGCGCCTCAAATGACTC
CTTAGGTGCAGGACGCTCCAGGCCAGTTCCCGGATCCGCAGCGCAGGCAG
TTGTAGATCCTATCCAAGGAGCCTGGGACTCAGAATTTAATGCCCTCCCT
GCCGTAACGGGACCTTATGATTTCCTCCCTGCTCAAGCCTTTCAACAGCT
GGACGATACATTTGGTGCCTTTGGAGAATGTAATGTCCCTTGAATGCAGA
AAGCCTCCAGGAGGTCGACTCCCCGGTCGCGAATATCCAAGGCTTGCGAC
CGTTGTCGTCGACAGAAGCTCAAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0042025	host cell nucleus
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated
GO:0006351	transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677	DNA binding
GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
KJC3_007623	KJC3_007623	Aspergillus niger KJC3	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_007623-T1	KJC3_007623-T1-protein	Aspergillus niger KJC3	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_007623-T1.cds	KJC3_007623-T1.cds	Aspergillus niger KJC3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_007623-T1.utr3p1	KJC3_007623-T1.utr3p1	Aspergillus niger KJC3	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_007623-T1.exon2	KJC3_007623-T1.exon2	Aspergillus niger KJC3	exon
KJC3_007623-T1.exon1	KJC3_007623-T1.exon1	Aspergillus niger KJC3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_007623-T1.utr5p1	KJC3_007623-T1.utr5p1	Aspergillus niger KJC3	five_prime_UTR

Properties


Property Name	Value
DBxref	InterPro:IPR036864
DBxref	InterPro:IPR001138
DBxref	InterPro:IPR007219
DBxref	PFAM:PF04082
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC3	2021-10-31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ch5	supercontig	ch5:2969129..2972202 -

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KJC3_007623-T1, KJC3_007623-T1 (mRNA) Aspergillus niger KJC3

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KJC3_007623-T1, KJC3_007623-T1 (mRNA) Aspergillus niger KJC3