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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:125474..127753+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007783-T1 ID=KJC3_007783-T1|Name=KJC3_007783-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2280bp|location=Sequence derived from alignment at ch6:125474..127753+ (Aspergillus niger KJC3) TGCTGTCGTGGGCAGCCGATCCCAGACAAGGCGCTCTCCAGGTGCGTGAG
AACCAGAGGCCGAGGGAGGATCGACACCGTGTTTTGAGGGCCACTCCTGC
TGCAGTTTGAATAGCTATCAAGGTGACAAGTAGGTGCCGGTTTGCCCTCC
TCCTTTTCAATGCGGACAGAACGAGGGGGTCGACATTGCAGGCCGAAGTC
AACTGGCCACACCCGAGATCTCCCCCACAACCCTATTCTTCTTACCCCGG
ATTTCGACTCCACATCCCTTGCCAGTCCACGTCGATCCTTTGGTCTCTGC
TGTCTGCACGAGCCACGAGCCAAGAGAGGGGCCAACCCGTAGCTTATAAA
GAGCTTGGCCAGAAAGATCTCCCCAGGATCCCCACCGACTGCATTACTCA
CCCGACTGTCGCAGGAAACTGAATCACATCATGGCGGCCAGAGACCCTAA
ATCCTCGGTTGGGACGGTGCAAAAGATCGCGGACGAGGATAACCACCCTC
ATCGTTCGCTGGGCCATGTTCGCCTGCGCCATCATGAAACCAACGAGGTT
ATTTTGGTCCCTACTCCGTCGGACGACCCGAACGATCCACTGCGATGGTA
TGTACAATGCTCGTCCCAAGCGCCTTTGTAGATGCTCATCGATGACACCT
TCCGCTAGGTCTACTTCGTACAAGATATACATTGCGGTTCTTGTCTCTCT
AGCCATGGTGATGTGCAACTTCATGTCCGCCGGTCCGACCGTCGCCATGG
TGGACGTCGCGGCAGACTTCAACTCGAGTGTGTCTCGCGCAGCCTACTTT
TTCAACAACAGTGCACTACTCCAAGGAGTCTCCAACTTAATTTGGGTTCC
GCTCCTGAACAAGTACGGTCGGCGGCCCATCTACATATCAGCATACCTGC
TCTACTTCTTCATGATCCTGGGCGCCGGGTTAGCCAAGACATATGCCGGT
GAGCTGACCACGCGCACCATCCTGGGTGTGGGCGCAGGGGCAGGAGAGTG
TTTGGCTCCAGTCACAATTGCCGATGTCTTCTATCTCCACCAGCGCGGCT
ATGGCATGGCGTAAGTGAACGATGATGATTGACGTGCAAGCTGCTGAACT
GATTGTCTTCCATCCACTAGAATATACAACTCCGCCTTGAGCGCGGGTGT
CTCCTTTGGCATCATCATCTCTGGCCTGGTGACGATCAACCACTCCTGGC
GGGTTATCTACTGGGTCGGTTGTGCGCTTGTCGGCGCTCTGTGGATTGTG
GTCGTCTTCTTCTTCCCTGAGACTGCATTTCGTCGAACGGACAATGTCGA
TGACCTTTACAACACGCAGAAGCATGCCGAGCATGTCGAGTCCCGGGGCG
AAGAGACACTCTCCCGCAAACAGAGCTACCTGCAGAGTCTGCGCTTTTGG
TCCGGCCAGACATATACAGATGAGTCCCTGTGGCGGATGTTCATCCGACC
CTTTGGCCTCATCCTGCTGCCTCCGATCTTCTGGGCGACGATCGTCATGT
CCGTGACGATTGGCTTTCTCGTGGCGGTCACTTCGAACTTCGCCACCGCT
TTTAGCGAAACGTATGGGTTTGCTGCCTGGCAGAGCGGGTTATGCTTCAT
TGCCGGCATGCTGGGCTGTTTCTTCGGCACCTTCGCCGGAGGGCCCTTCT
CCGACTGGGTGGCCGACTATCTCACCAAGCGCAATGGCGGTATTCGAGAG
CCGGAAATGCGTCTGCCCGCCATCATTCCGAGTGTCATTGCTGCGCCACT
GGCGCTGCTGCTGTATGGCTTTGGCATCGATCGTGCCTGGCACTGGATTG
TGCCGACCATTGGCCTTGGGCTATGTAGGTTGTGCCCAACCGAGATCATG
ACAATACACATTGCTAACGCATCTTTGCAGTGTCCTTTGCCATCAGTCAG
GGAACGAATGTCTCCTTCGTGTATTGTGTCGACGCCTACCGACCGGTGGC
TGGAGAAGTCGCCGTTACTCAGCTTGCCTTTAAATGTAGGACCCATCTTT
CTTGTTACGCTATAAAAGTAACAGTATCACTGACAGCTCAATAAGCCTGC
TTCGGATTCCTGCTATCCTTCTATACCAACCCGTGGATCGCCGAATCCGG
CTACGCGGCCGCCTTTGGCGCCATGGCGGGCATCTCGGGGGGTTGCCTGC
TCTTCTTCATTCCGCTGTATTTATGGGGGAGACATGTTCGACTGGCATCG
ATGAAGTGGCCCTTCGTTCAGTTTGTCTTCTGGAAGGATGATCGGGAGGT
GGGAGAATAGTCCGTTAGCTGAGGTCGCGT back to topCoding sequence (CDS) from alignment at ch6:125474..127753+ >KJC3_007783-T1 ID=KJC3_007783-T1|Name=KJC3_007783-T1|organism=Aspergillus niger KJC3|type=CDS|length=7965bp|location=Sequence derived from alignment at ch6:125474..127753+ (Aspergillus niger KJC3) ATGGCGGCCAGAGACCCTAAATCCTCGGTTGGGACGGTGCAAAAGATCGC GGACGAGGATAACCACCCTCATCGTTCGCTGGGCCATGTTCGCCTGCGCC ATCATGAAACCAACGAGGTTATTTTGGTCCCTACTCCGTCGGACGACCCG AACGATCCACTGCGATGGTCTACTTCGTACAAGATATACATTGCGGTTCT TGTCTCTCTAGCCATGGTGATGTGCAACTTCATGTCCGCCGGTCCGACCG TCGCCATGGTGGACGTCGCGGCAGACTTCAACTCGAGTGTGTCTCGCGCA GCCTACTTTTTCAACAACAGTGCACTACTCCAAGGAGTCTCCAACTTAAT TTGGGTTCCGCTCCTGAACAAGTACGGTCGGCGGCCCATCTACATATCAG CATACCTGCTCTACTTCTTCATGATCCTGGGCGCCGGGTTAGCCAAGACA TATGCCGGTGAGCTGACCACGCGCACCATCCTGGGTGTGGGCGCAGGGGC AGGAGAGTGTTTGGCTCCAGTCACAATTGCCGATGTCTTCTATCTCCACC AGCGCGGCTATGGCATGGCAATATACAACTCCGCCTTGAGCGCGGGTGTC TCCTTTGGCATCATCATCTCTGGCCTGGTGACGATCAACCACTCCTGGCG GGTTATCTACTGGGTCGGTTGTGCGCTTGTCGGCGCTCTGTGGATTGTGG TCGTCTTCTTCTTCCCTGAGACTGCATTTCGTCGAACGGACAATGTCGAT GACCTTTACAACACGCAGAAGCATGCCGAGCATGTCGAGTCCCGGGGCGA AGAGACACTCTCCCGCAAACAGAGCTACCTGCAGAGTCTGCGCTTTTGGT CCGGCCAGACATATACAGATGAGTCCCTGTGGCGGATGTTCATCCGACCC TTTGGCCTCATCCTGCTGCCTCCGATCTTCTGGGCGACGATCGTCATGTC CGTGACGATTGGCTTTCTCGTGGCGGTCACTTCGAACTTCGCCACCGCTT TTAGCGAAACGTATGGGTTTGCTGCCTGGCAGAGCGGGTTATGCTTCATT GCCGGCATGCTGGGCTGTTTCTTCGGCACCTTCGCCGGAGGGCCCTTCTC CGACTGGGTGGCCGACTATCTCACCAAGCGCAATGGCGGTATTCGAGAGC CGGAAATGCGTCTGCCCGCCATCATTCCGAGTGTCATTGCTGCGCCACTG GCGCTGCTGCTGTATGGCTTTGGCATCGATCGTGCCTGGCACTGGATTGT GCCGACCATTGGCCTTGGGCTATTGTCCTTTGCCATCAGTCAGGGAACGA ATGTCTCCTTCGTGTATTGTGTCGACGCCTACCGACCGGTGGCTGGAGAA GTCGCCGTTACTCAGCTTGCCTTTAAATCCTGCTTCGGATTCCTGCTATC CTTCTATACCAACCCGTGGATCGCCGAATCCGGCTACGCGGCCGCCTTTG GCGCCATGGCGGGCATCTCGGGGGGTTGCCTGCTCTTCTTCATTCCGCTG TATTTATGGGGGAGACATGTTCGACTGGCATCGATGAAGTGGCCCTTCGT TCAGTTTGTCTTCTGGAAGGATGATCGGGAGGTGGGAGAATAGATGGCGG CCAGAGACCCTAAATCCTCGGTTGGGACGGTGCAAAAGATCGCGGACGAG GATAACCACCCTCATCGTTCGCTGGGCCATGTTCGCCTGCGCCATCATGA AACCAACGAGGTTATTTTGGTCCCTACTCCGTCGGACGACCCGAACGATC CACTGCGATGGTCTACTTCGTACAAGATATACATTGCGGTTCTTGTCTCT CTAGCCATGGTGATGTGCAACTTCATGTCCGCCGGTCCGACCGTCGCCAT GGTGGACGTCGCGGCAGACTTCAACTCGAGTGTGTCTCGCGCAGCCTACT TTTTCAACAACAGTGCACTACTCCAAGGAGTCTCCAACTTAATTTGGGTT CCGCTCCTGAACAAGTACGGTCGGCGGCCCATCTACATATCAGCATACCT GCTCTACTTCTTCATGATCCTGGGCGCCGGGTTAGCCAAGACATATGCCG GTGAGCTGACCACGCGCACCATCCTGGGTGTGGGCGCAGGGGCAGGAGAG TGTTTGGCTCCAGTCACAATTGCCGATGTCTTCTATCTCCACCAGCGCGG CTATGGCATGGCAATATACAACTCCGCCTTGAGCGCGGGTGTCTCCTTTG GCATCATCATCTCTGGCCTGGTGACGATCAACCACTCCTGGCGGGTTATC TACTGGGTCGGTTGTGCGCTTGTCGGCGCTCTGTGGATTGTGGTCGTCTT CTTCTTCCCTGAGACTGCATTTCGTCGAACGGACAATGTCGATGACCTTT ACAACACGCAGAAGCATGCCGAGCATGTCGAGTCCCGGGGCGAAGAGACA CTCTCCCGCAAACAGAGCTACCTGCAGAGTCTGCGCTTTTGGTCCGGCCA GACATATACAGATGAGTCCCTGTGGCGGATGTTCATCCGACCCTTTGGCC TCATCCTGCTGCCTCCGATCTTCTGGGCGACGATCGTCATGTCCGTGACG ATTGGCTTTCTCGTGGCGGTCACTTCGAACTTCGCCACCGCTTTTAGCGA AACGTATGGGTTTGCTGCCTGGCAGAGCGGGTTATGCTTCATTGCCGGCA TGCTGGGCTGTTTCTTCGGCACCTTCGCCGGAGGGCCCTTCTCCGACTGG GTGGCCGACTATCTCACCAAGCGCAATGGCGGTATTCGAGAGCCGGAAAT GCGTCTGCCCGCCATCATTCCGAGTGTCATTGCTGCGCCACTGGCGCTGC TGCTGTATGGCTTTGGCATCGATCGTGCCTGGCACTGGATTGTGCCGACC ATTGGCCTTGGGCTATTGTCCTTTGCCATCAGTCAGGGAACGAATGTCTC CTTCGTGTATTGTGTCGACGCCTACCGACCGGTGGCTGGAGAAGTCGCCG TTACTCAGCTTGCCTTTAAATCCTGCTTCGGATTCCTGCTATCCTTCTAT ACCAACCCGTGGATCGCCGAATCCGGCTACGCGGCCGCCTTTGGCGCCAT GGCGGGCATCTCGGGGGGTTGCCTGCTCTTCTTCATTCCGCTGTATTTAT GGGGGAGACATGTTCGACTGGCATCGATGAAGTGGCCCTTCGTTCAGTTT GTCTTCTGGAAGGATGATCGGGAGGTGGGAGAATAGATGGCGGCCAGAGA CCCTAAATCCTCGGTTGGGACGGTGCAAAAGATCGCGGACGAGGATAACC ACCCTCATCGTTCGCTGGGCCATGTTCGCCTGCGCCATCATGAAACCAAC GAGGTTATTTTGGTCCCTACTCCGTCGGACGACCCGAACGATCCACTGCG ATGGTCTACTTCGTACAAGATATACATTGCGGTTCTTGTCTCTCTAGCCA TGGTGATGTGCAACTTCATGTCCGCCGGTCCGACCGTCGCCATGGTGGAC GTCGCGGCAGACTTCAACTCGAGTGTGTCTCGCGCAGCCTACTTTTTCAA CAACAGTGCACTACTCCAAGGAGTCTCCAACTTAATTTGGGTTCCGCTCC TGAACAAGTACGGTCGGCGGCCCATCTACATATCAGCATACCTGCTCTAC TTCTTCATGATCCTGGGCGCCGGGTTAGCCAAGACATATGCCGGTGAGCT GACCACGCGCACCATCCTGGGTGTGGGCGCAGGGGCAGGAGAGTGTTTGG CTCCAGTCACAATTGCCGATGTCTTCTATCTCCACCAGCGCGGCTATGGC ATGGCAATATACAACTCCGCCTTGAGCGCGGGTGTCTCCTTTGGCATCAT CATCTCTGGCCTGGTGACGATCAACCACTCCTGGCGGGTTATCTACTGGG TCGGTTGTGCGCTTGTCGGCGCTCTGTGGATTGTGGTCGTCTTCTTCTTC CCTGAGACTGCATTTCGTCGAACGGACAATGTCGATGACCTTTACAACAC GCAGAAGCATGCCGAGCATGTCGAGTCCCGGGGCGAAGAGACACTCTCCC GCAAACAGAGCTACCTGCAGAGTCTGCGCTTTTGGTCCGGCCAGACATAT ACAGATGAGTCCCTGTGGCGGATGTTCATCCGACCCTTTGGCCTCATCCT GCTGCCTCCGATCTTCTGGGCGACGATCGTCATGTCCGTGACGATTGGCT TTCTCGTGGCGGTCACTTCGAACTTCGCCACCGCTTTTAGCGAAACGTAT GGGTTTGCTGCCTGGCAGAGCGGGTTATGCTTCATTGCCGGCATGCTGGG CTGTTTCTTCGGCACCTTCGCCGGAGGGCCCTTCTCCGACTGGGTGGCCG ACTATCTCACCAAGCGCAATGGCGGTATTCGAGAGCCGGAAATGCGTCTG CCCGCCATCATTCCGAGTGTCATTGCTGCGCCACTGGCGCTGCTGCTGTA TGGCTTTGGCATCGATCGTGCCTGGCACTGGATTGTGCCGACCATTGGCC TTGGGCTATTGTCCTTTGCCATCAGTCAGGGAACGAATGTCTCCTTCGTG TATTGTGTCGACGCCTACCGACCGGTGGCTGGAGAAGTCGCCGTTACTCA GCTTGCCTTTAAATCCTGCTTCGGATTCCTGCTATCCTTCTATACCAACC CGTGGATCGCCGAATCCGGCTACGCGGCCGCCTTTGGCGCCATGGCGGGC ATCTCGGGGGGTTGCCTGCTCTTCTTCATTCCGCTGTATTTATGGGGGAG ACATGTTCGACTGGCATCGATGAAGTGGCCCTTCGTTCAGTTTGTCTTCT GGAAGGATGATCGGGAGGTGGGAGAATAGATGGCGGCCAGAGACCCTAAA TCCTCGGTTGGGACGGTGCAAAAGATCGCGGACGAGGATAACCACCCTCA TCGTTCGCTGGGCCATGTTCGCCTGCGCCATCATGAAACCAACGAGGTTA TTTTGGTCCCTACTCCGTCGGACGACCCGAACGATCCACTGCGATGGTCT ACTTCGTACAAGATATACATTGCGGTTCTTGTCTCTCTAGCCATGGTGAT GTGCAACTTCATGTCCGCCGGTCCGACCGTCGCCATGGTGGACGTCGCGG CAGACTTCAACTCGAGTGTGTCTCGCGCAGCCTACTTTTTCAACAACAGT GCACTACTCCAAGGAGTCTCCAACTTAATTTGGGTTCCGCTCCTGAACAA GTACGGTCGGCGGCCCATCTACATATCAGCATACCTGCTCTACTTCTTCA TGATCCTGGGCGCCGGGTTAGCCAAGACATATGCCGGTGAGCTGACCACG CGCACCATCCTGGGTGTGGGCGCAGGGGCAGGAGAGTGTTTGGCTCCAGT CACAATTGCCGATGTCTTCTATCTCCACCAGCGCGGCTATGGCATGGCAA TATACAACTCCGCCTTGAGCGCGGGTGTCTCCTTTGGCATCATCATCTCT GGCCTGGTGACGATCAACCACTCCTGGCGGGTTATCTACTGGGTCGGTTG TGCGCTTGTCGGCGCTCTGTGGATTGTGGTCGTCTTCTTCTTCCCTGAGA CTGCATTTCGTCGAACGGACAATGTCGATGACCTTTACAACACGCAGAAG CATGCCGAGCATGTCGAGTCCCGGGGCGAAGAGACACTCTCCCGCAAACA GAGCTACCTGCAGAGTCTGCGCTTTTGGTCCGGCCAGACATATACAGATG AGTCCCTGTGGCGGATGTTCATCCGACCCTTTGGCCTCATCCTGCTGCCT CCGATCTTCTGGGCGACGATCGTCATGTCCGTGACGATTGGCTTTCTCGT GGCGGTCACTTCGAACTTCGCCACCGCTTTTAGCGAAACGTATGGGTTTG CTGCCTGGCAGAGCGGGTTATGCTTCATTGCCGGCATGCTGGGCTGTTTC TTCGGCACCTTCGCCGGAGGGCCCTTCTCCGACTGGGTGGCCGACTATCT CACCAAGCGCAATGGCGGTATTCGAGAGCCGGAAATGCGTCTGCCCGCCA TCATTCCGAGTGTCATTGCTGCGCCACTGGCGCTGCTGCTGTATGGCTTT GGCATCGATCGTGCCTGGCACTGGATTGTGCCGACCATTGGCCTTGGGCT ATTGTCCTTTGCCATCAGTCAGGGAACGAATGTCTCCTTCGTGTATTGTG TCGACGCCTACCGACCGGTGGCTGGAGAAGTCGCCGTTACTCAGCTTGCC TTTAAATCCTGCTTCGGATTCCTGCTATCCTTCTATACCAACCCGTGGAT CGCCGAATCCGGCTACGCGGCCGCCTTTGGCGCCATGGCGGGCATCTCGG GGGGTTGCCTGCTCTTCTTCATTCCGCTGTATTTATGGGGGAGACATGTT CGACTGGCATCGATGAAGTGGCCCTTCGTTCAGTTTGTCTTCTGGAAGGA TGATCGGGAGGTGGGAGAATAGATGGCGGCCAGAGACCCTAAATCCTCGG TTGGGACGGTGCAAAAGATCGCGGACGAGGATAACCACCCTCATCGTTCG CTGGGCCATGTTCGCCTGCGCCATCATGAAACCAACGAGGTTATTTTGGT CCCTACTCCGTCGGACGACCCGAACGATCCACTGCGATGGTCTACTTCGT ACAAGATATACATTGCGGTTCTTGTCTCTCTAGCCATGGTGATGTGCAAC TTCATGTCCGCCGGTCCGACCGTCGCCATGGTGGACGTCGCGGCAGACTT CAACTCGAGTGTGTCTCGCGCAGCCTACTTTTTCAACAACAGTGCACTAC TCCAAGGAGTCTCCAACTTAATTTGGGTTCCGCTCCTGAACAAGTACGGT CGGCGGCCCATCTACATATCAGCATACCTGCTCTACTTCTTCATGATCCT GGGCGCCGGGTTAGCCAAGACATATGCCGGTGAGCTGACCACGCGCACCA TCCTGGGTGTGGGCGCAGGGGCAGGAGAGTGTTTGGCTCCAGTCACAATT GCCGATGTCTTCTATCTCCACCAGCGCGGCTATGGCATGGCAATATACAA CTCCGCCTTGAGCGCGGGTGTCTCCTTTGGCATCATCATCTCTGGCCTGG TGACGATCAACCACTCCTGGCGGGTTATCTACTGGGTCGGTTGTGCGCTT GTCGGCGCTCTGTGGATTGTGGTCGTCTTCTTCTTCCCTGAGACTGCATT TCGTCGAACGGACAATGTCGATGACCTTTACAACACGCAGAAGCATGCCG AGCATGTCGAGTCCCGGGGCGAAGAGACACTCTCCCGCAAACAGAGCTAC CTGCAGAGTCTGCGCTTTTGGTCCGGCCAGACATATACAGATGAGTCCCT GTGGCGGATGTTCATCCGACCCTTTGGCCTCATCCTGCTGCCTCCGATCT TCTGGGCGACGATCGTCATGTCCGTGACGATTGGCTTTCTCGTGGCGGTC ACTTCGAACTTCGCCACCGCTTTTAGCGAAACGTATGGGTTTGCTGCCTG GCAGAGCGGGTTATGCTTCATTGCCGGCATGCTGGGCTGTTTCTTCGGCA CCTTCGCCGGAGGGCCCTTCTCCGACTGGGTGGCCGACTATCTCACCAAG CGCAATGGCGGTATTCGAGAGCCGGAAATGCGTCTGCCCGCCATCATTCC GAGTGTCATTGCTGCGCCACTGGCGCTGCTGCTGTATGGCTTTGGCATCG ATCGTGCCTGGCACTGGATTGTGCCGACCATTGGCCTTGGGCTATTGTCC TTTGCCATCAGTCAGGGAACGAATGTCTCCTTCGTGTATTGTGTCGACGC CTACCGACCGGTGGCTGGAGAAGTCGCCGTTACTCAGCTTGCCTTTAAAT CCTGCTTCGGATTCCTGCTATCCTTCTATACCAACCCGTGGATCGCCGAA TCCGGCTACGCGGCCGCCTTTGGCGCCATGGCGGGCATCTCGGGGGGTTG CCTGCTCTTCTTCATTCCGCTGTATTTATGGGGGAGACATGTTCGACTGG CATCGATGAAGTGGCCCTTCGTTCAGTTTGTCTTCTGGAAGGATGATCGG GAGGTGGGAGAATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
| KJC3_007783-T1.utr5p1 | KJC3_007783-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
| KJC3_007783-T1.utr3p1 | KJC3_007783-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| ch6 | supercontig | ch6:125474..127753 + |
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