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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:291813..293468- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007859-T1 ID=KJC3_007859-T1|Name=KJC3_007859-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1656bp|location=Sequence derived from alignment at ch6:291813..293468- (Aspergillus niger KJC3)
ATGTCTTCCAGCTCCCAGCACGCCAGGAAATGGTCGACGATGCCGATCGA
CACGAACGCGGCCCCGTTCTTGAGCCTCGACTTCGAGGATGAGGTTGTTT
ACGAGGACGAGCGACGCCAAAGCATCAAACAGGGGACCATCTGTGGGCTG
GTCGAGCAACTGACACGCCATGATCGACTAGACGTCTCGTTCAACGAGAC
CTTCCTCATGACCTACCCTACATTCGTCTGCGGCAGGGAACTCTTTGAGA
TTCTCCTCCAACGACTTAACATGCCCCCTCCTCCGGGCCTTACCGACTCT
GACCTCTCACGATGGACAGAACAGAAGCAGAAGACCGTCCGCTTCCGCGT
CATTAACATACTCAAGACCTGGCTAGAGCGATACTGGATGGAACCACCCA
CCGAATCAACTATGGACTTCCTCCGCCACATCCACGCTCAAATCCAACCT
CTCACCAACGTTCCCACCTGCTCGCAACTCCTCACCATCATCGAACACCG
CTTGAAGGGCCAAGACATCCTCAAACGATACATGACTCCCCCAAACAGCA
CAGTGCCCAAACCACTCACCCCGAGGAACATGAAGAAGCTCAAGTTCCTC
GACCTCGATCCGATGGAGCTCGCCCGCCAACTCACCATCATCGAATCCCG
TCTCTTCGCTCGAATCAAACCTACCGAGTGTCTCAACAAATCATGGCAGA
AGAAAGATACCGATAGGCCGCCATCTGTTCCTGCCTCACGCCGCACCAGC
ACCAGCACAACCAGTAGCACCAGCTCCATCGAACGCACCACCGGCGTCAA
CGCCACGATTCTACACTCCAACCAGCTCGCAAACTGGGTAGGAGAGATGA
TCCTGGCCCAGGATGAGATGAAGAAGCGTGTCTCGCTGATCAAACAGATT
GTCAATATTGCCGATGTATGCCCCCCTGCACCCAGCACTATCATCCTACA
TACTAACATACAGGTGTGATGACAGAACTGCCGCTCCTTAAGCAACTTCG
CAACCATGATGTCCCTCATCTCCGGCCTCGCCACAAGCCCTATCTACCGT
CTCCACCGCACCTGGACGCAAGTGAACCCCAAGACGCGCAAACTCCTCGA
AGACATGCAAAGTCTCATGTCCAGCGAGAAGAACTTCATCAAGTACCGAG
ATAAGCTACACGGGGCAAGCCCACCATGCATTCCCTTCCTCGGTACGTCC
CTTCCCCATCACCATTCATAACCCAACCCACACTCTCATCCACATACTAA
CACACCAAACCGTAATAAAGGAACTTACCTAACCGACCTCACCTTCATTG
AAGACGGCATCCCGAGCCACACCCCACCGCCCAACGTCATGATAAACTTC
AGCAAGCGGGTCAAAGTCGCCGAGATCCTGCGCGAGATTGAGAGCTGCCA
GGCCGTCGGGTACAGTTTGCTTCCTGTCCCCGAGATACAGGAGTTTATTG
TCCGGAATGTGCAAGCCGCCGGGGGTGATGTCGAGGGGATGTATGAGAGG
AGTTTGGCGCTGGAGCCGAGGATGGTAGGCGAGGAGAGGATGAATATGGG
GCAGCTGGGGGTCGGGATGATGGGGATGAATATGGGGAGGGGAGGGTATA
TTTCTACGGGGAGTCATATGAGTTCGGTGGTTATTGCAAGTATGGCTATG
AGGTAG back to topCoding sequence (CDS) from alignment at ch6:291813..293468- >KJC3_007859-T1 ID=KJC3_007859-T1|Name=KJC3_007859-T1|organism=Aspergillus niger KJC3|type=CDS|length=4554bp|location=Sequence derived from alignment at ch6:291813..293468- (Aspergillus niger KJC3)
GAACTTACCTAACCGACCTCACCTTCATTGAAGACGGCATCCCGAGCCAC
ACCCCACCGCCCAACGTCATGATAAACTTCAGCAAGCGGGTCAAAGTCGC
CGAGATCCTGCGCGAGATTGAGAGCTGCCAGGCCGTCGGGTACAGTTTGC
TTCCTGTCCCCGAGATACAGGAGTTTATTGTCCGGAATGTGCAAGCCGCC
GGGGGTGATGTCGAGGGGATGTATGAGAGGAGTTTGGCGCTGGAGCCGAG
GATGGTAGGCGAGGAGAGGATGAATATGGGGCAGCTGGGGGTCGGGATGA
TGGGGATGAATATGGGGAGGGGAGGGTATATTTCTACGGGGAGTCATATG
AGTTCGGTGGTTATTGCAAGTATGGCTATGAGGTAGAACTGCCGCTCCTT
AAGCAACTTCGCAACCATGATGTCCCTCATCTCCGGCCTCGCCACAAGCC
CTATCTACCGTCTCCACCGCACCTGGACGCAAGTGAACCCCAAGACGCGC
AAACTCCTCGAAGACATGCAAAGTCTCATGTCCAGCGAGAAGAACTTCAT
CAAGTACCGAGATAAGCTACACGGGGCAAGCCCACCATGCATTCCCTTCC
TCGATGTCTTCCAGCTCCCAGCACGCCAGGAAATGGTCGACGATGCCGAT
CGACACGAACGCGGCCCCGTTCTTGAGCCTCGACTTCGAGGATGAGGTTG
TTTACGAGGACGAGCGACGCCAAAGCATCAAACAGGGGACCATCTGTGGG
CTGGTCGAGCAACTGACACGCCATGATCGACTAGACGTCTCGTTCAACGA
GACCTTCCTCATGACCTACCCTACATTCGTCTGCGGCAGGGAACTCTTTG
AGATTCTCCTCCAACGACTTAACATGCCCCCTCCTCCGGGCCTTACCGAC
TCTGACCTCTCACGATGGACAGAACAGAAGCAGAAGACCGTCCGCTTCCG
CGTCATTAACATACTCAAGACCTGGCTAGAGCGATACTGGATGGAACCAC
CCACCGAATCAACTATGGACTTCCTCCGCCACATCCACGCTCAAATCCAA
CCTCTCACCAACGTTCCCACCTGCTCGCAACTCCTCACCATCATCGAACA
CCGCTTGAAGGGCCAAGACATCCTCAAACGATACATGACTCCCCCAAACA
GCACAGTGCCCAAACCACTCACCCCGAGGAACATGAAGAAGCTCAAGTTC
CTCGACCTCGATCCGATGGAGCTCGCCCGCCAACTCACCATCATCGAATC
CCGTCTCTTCGCTCGAATCAAACCTACCGAGTGTCTCAACAAATCATGGC
AGAAGAAAGATACCGATAGGCCGCCATCTGTTCCTGCCTCACGCCGCACC
AGCACCAGCACAACCAGTAGCACCAGCTCCATCGAACGCACCACCGGCGT
CAACGCCACGATTCTACACTCCAACCAGCTCGCAAACTGGGTAGGAGAGA
TGATCCTGGCCCAGGATGAGATGAAGAAGCGTGTCTCGCTGATCAAACAG
ATTGTCAATATTGCCGATGAACTTACCTAACCGACCTCACCTTCATTGAA
GACGGCATCCCGAGCCACACCCCACCGCCCAACGTCATGATAAACTTCAG
CAAGCGGGTCAAAGTCGCCGAGATCCTGCGCGAGATTGAGAGCTGCCAGG
CCGTCGGGTACAGTTTGCTTCCTGTCCCCGAGATACAGGAGTTTATTGTC
CGGAATGTGCAAGCCGCCGGGGGTGATGTCGAGGGGATGTATGAGAGGAG
TTTGGCGCTGGAGCCGAGGATGGTAGGCGAGGAGAGGATGAATATGGGGC
AGCTGGGGGTCGGGATGATGGGGATGAATATGGGGAGGGGAGGGTATATT
TCTACGGGGAGTCATATGAGTTCGGTGGTTATTGCAAGTATGGCTATGAG
GTAGAACTGCCGCTCCTTAAGCAACTTCGCAACCATGATGTCCCTCATCT
CCGGCCTCGCCACAAGCCCTATCTACCGTCTCCACCGCACCTGGACGCAA
GTGAACCCCAAGACGCGCAAACTCCTCGAAGACATGCAAAGTCTCATGTC
CAGCGAGAAGAACTTCATCAAGTACCGAGATAAGCTACACGGGGCAAGCC
CACCATGCATTCCCTTCCTCGATGTCTTCCAGCTCCCAGCACGCCAGGAA
ATGGTCGACGATGCCGATCGACACGAACGCGGCCCCGTTCTTGAGCCTCG
ACTTCGAGGATGAGGTTGTTTACGAGGACGAGCGACGCCAAAGCATCAAA
CAGGGGACCATCTGTGGGCTGGTCGAGCAACTGACACGCCATGATCGACT
AGACGTCTCGTTCAACGAGACCTTCCTCATGACCTACCCTACATTCGTCT
GCGGCAGGGAACTCTTTGAGATTCTCCTCCAACGACTTAACATGCCCCCT
CCTCCGGGCCTTACCGACTCTGACCTCTCACGATGGACAGAACAGAAGCA
GAAGACCGTCCGCTTCCGCGTCATTAACATACTCAAGACCTGGCTAGAGC
GATACTGGATGGAACCACCCACCGAATCAACTATGGACTTCCTCCGCCAC
ATCCACGCTCAAATCCAACCTCTCACCAACGTTCCCACCTGCTCGCAACT
CCTCACCATCATCGAACACCGCTTGAAGGGCCAAGACATCCTCAAACGAT
ACATGACTCCCCCAAACAGCACAGTGCCCAAACCACTCACCCCGAGGAAC
ATGAAGAAGCTCAAGTTCCTCGACCTCGATCCGATGGAGCTCGCCCGCCA
ACTCACCATCATCGAATCCCGTCTCTTCGCTCGAATCAAACCTACCGAGT
GTCTCAACAAATCATGGCAGAAGAAAGATACCGATAGGCCGCCATCTGTT
CCTGCCTCACGCCGCACCAGCACCAGCACAACCAGTAGCACCAGCTCCAT
CGAACGCACCACCGGCGTCAACGCCACGATTCTACACTCCAACCAGCTCG
CAAACTGGGTAGGAGAGATGATCCTGGCCCAGGATGAGATGAAGAAGCGT
GTCTCGCTGATCAAACAGATTGTCAATATTGCCGATGAACTTACCTAACC
GACCTCACCTTCATTGAAGACGGCATCCCGAGCCACACCCCACCGCCCAA
CGTCATGATAAACTTCAGCAAGCGGGTCAAAGTCGCCGAGATCCTGCGCG
AGATTGAGAGCTGCCAGGCCGTCGGGTACAGTTTGCTTCCTGTCCCCGAG
ATACAGGAGTTTATTGTCCGGAATGTGCAAGCCGCCGGGGGTGATGTCGA
GGGGATGTATGAGAGGAGTTTGGCGCTGGAGCCGAGGATGGTAGGCGAGG
AGAGGATGAATATGGGGCAGCTGGGGGTCGGGATGATGGGGATGAATATG
GGGAGGGGAGGGTATATTTCTACGGGGAGTCATATGAGTTCGGTGGTTAT
TGCAAGTATGGCTATGAGGTAGAACTGCCGCTCCTTAAGCAACTTCGCAA
CCATGATGTCCCTCATCTCCGGCCTCGCCACAAGCCCTATCTACCGTCTC
CACCGCACCTGGACGCAAGTGAACCCCAAGACGCGCAAACTCCTCGAAGA
CATGCAAAGTCTCATGTCCAGCGAGAAGAACTTCATCAAGTACCGAGATA
AGCTACACGGGGCAAGCCCACCATGCATTCCCTTCCTCGATGTCTTCCAG
CTCCCAGCACGCCAGGAAATGGTCGACGATGCCGATCGACACGAACGCGG
CCCCGTTCTTGAGCCTCGACTTCGAGGATGAGGTTGTTTACGAGGACGAG
CGACGCCAAAGCATCAAACAGGGGACCATCTGTGGGCTGGTCGAGCAACT
GACACGCCATGATCGACTAGACGTCTCGTTCAACGAGACCTTCCTCATGA
CCTACCCTACATTCGTCTGCGGCAGGGAACTCTTTGAGATTCTCCTCCAA
CGACTTAACATGCCCCCTCCTCCGGGCCTTACCGACTCTGACCTCTCACG
ATGGACAGAACAGAAGCAGAAGACCGTCCGCTTCCGCGTCATTAACATAC
TCAAGACCTGGCTAGAGCGATACTGGATGGAACCACCCACCGAATCAACT
ATGGACTTCCTCCGCCACATCCACGCTCAAATCCAACCTCTCACCAACGT
TCCCACCTGCTCGCAACTCCTCACCATCATCGAACACCGCTTGAAGGGCC
AAGACATCCTCAAACGATACATGACTCCCCCAAACAGCACAGTGCCCAAA
CCACTCACCCCGAGGAACATGAAGAAGCTCAAGTTCCTCGACCTCGATCC
GATGGAGCTCGCCCGCCAACTCACCATCATCGAATCCCGTCTCTTCGCTC
GAATCAAACCTACCGAGTGTCTCAACAAATCATGGCAGAAGAAAGATACC
GATAGGCCGCCATCTGTTCCTGCCTCACGCCGCACCAGCACCAGCACAAC
CAGTAGCACCAGCTCCATCGAACGCACCACCGGCGTCAACGCCACGATTC
TACACTCCAACCAGCTCGCAAACTGGGTAGGAGAGATGATCCTGGCCCAG
GATGAGATGAAGAAGCGTGTCTCGCTGATCAAACAGATTGTCAATATTGC
CGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005085 | guanyl-nucleotide exchange factor activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007264 | small GTPase mediated signal transduction |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023578 |
| DBxref | InterPro:IPR019804 |
| DBxref | InterPro:IPR036964 |
| DBxref | InterPro:IPR001895 |
| DBxref | InterPro:IPR000651 |
| DBxref | PFAM:PF00618 |
| DBxref | PFAM:PF00617 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:291813..293468 - |
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