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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:747827..749673+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008032-T1 ID=KJC3_008032-T1|Name=KJC3_008032-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1847bp|location=Sequence derived from alignment at ch6:747827..749673+ (Aspergillus niger KJC3)
CCCAAAACTCGTGAAACAACCGAGGATTCCATTCCCGGGAATACTTGGTT
CCGGTGGTAGCCACACCGTCAATTGCCGTGAAGATAAGCGATTACAAAGT
ACATAAGCCAAGCCTGGCTGCAGTGATTGTTTCTGGAATTTGGGCTCAAC
CATTTACGCTCACCTCCTACTCTACACAACATTATCTTACTTGAATTATA
AGACTCTTCATCTTATACACTATCATTAGACTCAGACTCATATAATCACT
CGGAAACAAGCAAACATGTACTCCAAATTCTGGCCCAAGGGCGGCCTCCC
GGGAATTCTGCACCACTTCGTATGTCCAATTCTGACCTGTCCGACTCCCA
GCCGACCAGACTAACACAATATTTCCCAAATTTTAGACAGAAACCCTCGT
AACCTTCGAATACACAACCACTACCCCCTCTCTCTCCCAACCTCACACCC
TGCTCTTCGTCGGCGGCCTCGGCGATGGCCTCGCCACAACATCCTACATG
GCAGACCTAGCCCGTGCCCTCCACTCCACCCCCTGGTCCCTCTTCACCCT
GAACCTTACCTCCTCCTACCAGTCCTGGGGCCTGGGACATCTGGACCGCG
ATACCGACGAAATTGCCCAATGCATCCGCTACATCAAAGACTACAAAGCG
GATAAATACGGTTCTGCCTCTGCAGCTGGCAGCAAGATCGTCTTGATGGG
ACACTCCACTGGCAGCCAATGTGTCATGCATTACCTAACGCGGCCAAACC
CGCATACCACAAAACCGCCCTTTGATAAATACTTAGAGCATGTGGAGCGG
TTGCCGCTGGATGGTGCTATAATGCAAGCACCTGTGTCGGATCGCGAGGC
GATATTGTGGGTCTTAGAGAATGGATTTGGAGGCAGATCTTCTGCGGAGT
GTAAAGCTGTTTATGAAAAGCTAGTGGGCATGGCAAGAGAGGCAGAGGAG
AAGAGAATCAGGGAGGGTGGCGAATTCGATGTGATTCTGCCGATTGAGTT
GACTAGTTTTGCTTATCCGGCTAATACACCGTTGTCGGCGAGGCGGTTGT
TGAGTTTAGTGAGTCCAGATGCTCCGGGTAACCCTGGGGAGGACGATATG
TTCAGTTCGGACTTGGGGCCGGAGCAGTTGGAGAAGACCTTCGGAAAGGT
GAAGAGCGGAGGCTTGTTGGCAGGAAAGGCGAAGTTGATGGTGCTATACT
CGGGTAAGGATCAGAGTGTCCCTGACTGGGTGGATAAGGAGGCACTGTTG
AGGAAATGGCGGGGGATTGCAAACGCTGGATGTGCAAAGGGCGAAGAGGT
CTGGGATGATGAACATACTGCAGTCATTCCGGGCGCGTCGCATGCCCTCA
GTAATGATGATCAGGCGGAGCCAAGACGGTTCCTTGTGGACAAGGTCATG
GGGTATCTGAAAACTGTGGTTAACGTGTAATACACCTTTTTCTTTCTTCG
TGTACGATGATAAGTGTTGGATTTTCTGACCTTCTGAAGTGGTACGCCTG
ATGAGCCTTGTGCTTTGTCGGAGAAACAGCAGATCCACGAGACATGGAAT
GCTGCCAGTCAGCTTGAGACTGGGTCTAGGTATTCTACGCAAGACTCGAC
GGGCCTGCGGGCACGACGGGACTGGGTGAAATATGGCCTGGTAGCAACAG
TCTTGGTGCTTGCCTCACCTTATGTCTATCCACACTGCGGGGGCAATTAG
TGTGATGATGGTTTGAGTAGGTTATGGACAGGACCCCTCCTTTACGGTGA
ACGACTATGTTTATGCATGTATGATGTTGGATAGCAATGCAGATATCAAG
ATACAATTCAAGTGCTCGCGCAGACACTGCGAGATGTTCATTCTCTA back to topCoding sequence (CDS) from alignment at ch6:747827..749673+ >KJC3_008032-T1 ID=KJC3_008032-T1|Name=KJC3_008032-T1|organism=Aspergillus niger KJC3|type=CDS|length=3915bp|location=Sequence derived from alignment at ch6:747827..749673+ (Aspergillus niger KJC3)
ATGTACTCCAAATTCTGGCCCAAGGGCGGCCTCCCGGGAATTCTGCACCA
CTTCACAGAAACCCTCGTAACCTTCGAATACACAACCACTACCCCCTCTC
TCTCCCAACCTCACACCCTGCTCTTCGTCGGCGGCCTCGGCGATGGCCTC
GCCACAACATCCTACATGGCAGACCTAGCCCGTGCCCTCCACTCCACCCC
CTGGTCCCTCTTCACCCTGAACCTTACCTCCTCCTACCAGTCCTGGGGCC
TGGGACATCTGGACCGCGATACCGACGAAATTGCCCAATGCATCCGCTAC
ATCAAAGACTACAAAGCGGATAAATACGGTTCTGCCTCTGCAGCTGGCAG
CAAGATCGTCTTGATGGGACACTCCACTGGCAGCCAATGTGTCATGCATT
ACCTAACGCGGCCAAACCCGCATACCACAAAACCGCCCTTTGATAAATAC
TTAGAGCATGTGGAGCGGTTGCCGCTGGATGGTGCTATAATGCAAGCACC
TGTGTCGGATCGCGAGGCGATATTGTGGGTCTTAGAGAATGGATTTGGAG
GCAGATCTTCTGCGGAGTGTAAAGCTGTTTATGAAAAGCTAGTGGGCATG
GCAAGAGAGGCAGAGGAGAAGAGAATCAGGGAGGGTGGCGAATTCGATGT
GATTCTGCCGATTGAGTTGACTAGTTTTGCTTATCCGGCTAATACACCGT
TGTCGGCGAGGCGGTTGTTGAGTTTAGTGAGTCCAGATGCTCCGGGTAAC
CCTGGGGAGGACGATATGTTCAGTTCGGACTTGGGGCCGGAGCAGTTGGA
GAAGACCTTCGGAAAGGTGAAGAGCGGAGGCTTGTTGGCAGGAAAGGCGA
AGTTGATGGTGCTATACTCGGGTAAGGATCAGAGTGTCCCTGACTGGGTG
GATAAGGAGGCACTGTTGAGGAAATGGCGGGGGATTGCAAACGCTGGATG
TGCAAAGGGCGAAGAGGTCTGGGATGATGAACATACTGCAGTCATTCCGG
GCGCGTCGCATGCCCTCAGTAATGATGATCAGGCGGAGCCAAGACGGTTC
CTTGTGGACAAGGTCATGGGGTATCTGAAAACTGTGGTTAACGTTGGTAC
GCCTGATGAGCCTTGTGCTTTGTCGGAGAAACAGCAGATCCACGAGACAT
GGAATGCTGCCAGTCAGCTTGAGACTGGGTCTAGGTATTCTACGCAAGAC
TCGACGGGCCTGCGGGCACGACGGGACTGGGTGAAATATGGCCTGGTAGC
AACAGTCTTGGTGCTTGCCTCACCTTATGTCTATCCACACTGCGGGGGCA
ATTAGATGTACTCCAAATTCTGGCCCAAGGGCGGCCTCCCGGGAATTCTG
CACCACTTCACAGAAACCCTCGTAACCTTCGAATACACAACCACTACCCC
CTCTCTCTCCCAACCTCACACCCTGCTCTTCGTCGGCGGCCTCGGCGATG
GCCTCGCCACAACATCCTACATGGCAGACCTAGCCCGTGCCCTCCACTCC
ACCCCCTGGTCCCTCTTCACCCTGAACCTTACCTCCTCCTACCAGTCCTG
GGGCCTGGGACATCTGGACCGCGATACCGACGAAATTGCCCAATGCATCC
GCTACATCAAAGACTACAAAGCGGATAAATACGGTTCTGCCTCTGCAGCT
GGCAGCAAGATCGTCTTGATGGGACACTCCACTGGCAGCCAATGTGTCAT
GCATTACCTAACGCGGCCAAACCCGCATACCACAAAACCGCCCTTTGATA
AATACTTAGAGCATGTGGAGCGGTTGCCGCTGGATGGTGCTATAATGCAA
GCACCTGTGTCGGATCGCGAGGCGATATTGTGGGTCTTAGAGAATGGATT
TGGAGGCAGATCTTCTGCGGAGTGTAAAGCTGTTTATGAAAAGCTAGTGG
GCATGGCAAGAGAGGCAGAGGAGAAGAGAATCAGGGAGGGTGGCGAATTC
GATGTGATTCTGCCGATTGAGTTGACTAGTTTTGCTTATCCGGCTAATAC
ACCGTTGTCGGCGAGGCGGTTGTTGAGTTTAGTGAGTCCAGATGCTCCGG
GTAACCCTGGGGAGGACGATATGTTCAGTTCGGACTTGGGGCCGGAGCAG
TTGGAGAAGACCTTCGGAAAGGTGAAGAGCGGAGGCTTGTTGGCAGGAAA
GGCGAAGTTGATGGTGCTATACTCGGGTAAGGATCAGAGTGTCCCTGACT
GGGTGGATAAGGAGGCACTGTTGAGGAAATGGCGGGGGATTGCAAACGCT
GGATGTGCAAAGGGCGAAGAGGTCTGGGATGATGAACATACTGCAGTCAT
TCCGGGCGCGTCGCATGCCCTCAGTAATGATGATCAGGCGGAGCCAAGAC
GGTTCCTTGTGGACAAGGTCATGGGGTATCTGAAAACTGTGGTTAACGTT
GGTACGCCTGATGAGCCTTGTGCTTTGTCGGAGAAACAGCAGATCCACGA
GACATGGAATGCTGCCAGTCAGCTTGAGACTGGGTCTAGGTATTCTACGC
AAGACTCGACGGGCCTGCGGGCACGACGGGACTGGGTGAAATATGGCCTG
GTAGCAACAGTCTTGGTGCTTGCCTCACCTTATGTCTATCCACACTGCGG
GGGCAATTAGATGTACTCCAAATTCTGGCCCAAGGGCGGCCTCCCGGGAA
TTCTGCACCACTTCACAGAAACCCTCGTAACCTTCGAATACACAACCACT
ACCCCCTCTCTCTCCCAACCTCACACCCTGCTCTTCGTCGGCGGCCTCGG
CGATGGCCTCGCCACAACATCCTACATGGCAGACCTAGCCCGTGCCCTCC
ACTCCACCCCCTGGTCCCTCTTCACCCTGAACCTTACCTCCTCCTACCAG
TCCTGGGGCCTGGGACATCTGGACCGCGATACCGACGAAATTGCCCAATG
CATCCGCTACATCAAAGACTACAAAGCGGATAAATACGGTTCTGCCTCTG
CAGCTGGCAGCAAGATCGTCTTGATGGGACACTCCACTGGCAGCCAATGT
GTCATGCATTACCTAACGCGGCCAAACCCGCATACCACAAAACCGCCCTT
TGATAAATACTTAGAGCATGTGGAGCGGTTGCCGCTGGATGGTGCTATAA
TGCAAGCACCTGTGTCGGATCGCGAGGCGATATTGTGGGTCTTAGAGAAT
GGATTTGGAGGCAGATCTTCTGCGGAGTGTAAAGCTGTTTATGAAAAGCT
AGTGGGCATGGCAAGAGAGGCAGAGGAGAAGAGAATCAGGGAGGGTGGCG
AATTCGATGTGATTCTGCCGATTGAGTTGACTAGTTTTGCTTATCCGGCT
AATACACCGTTGTCGGCGAGGCGGTTGTTGAGTTTAGTGAGTCCAGATGC
TCCGGGTAACCCTGGGGAGGACGATATGTTCAGTTCGGACTTGGGGCCGG
AGCAGTTGGAGAAGACCTTCGGAAAGGTGAAGAGCGGAGGCTTGTTGGCA
GGAAAGGCGAAGTTGATGGTGCTATACTCGGGTAAGGATCAGAGTGTCCC
TGACTGGGTGGATAAGGAGGCACTGTTGAGGAAATGGCGGGGGATTGCAA
ACGCTGGATGTGCAAAGGGCGAAGAGGTCTGGGATGATGAACATACTGCA
GTCATTCCGGGCGCGTCGCATGCCCTCAGTAATGATGATCAGGCGGAGCC
AAGACGGTTCCTTGTGGACAAGGTCATGGGGTATCTGAAAACTGTGGTTA
ACGTTGGTACGCCTGATGAGCCTTGTGCTTTGTCGGAGAAACAGCAGATC
CACGAGACATGGAATGCTGCCAGTCAGCTTGAGACTGGGTCTAGGTATTC
TACGCAAGACTCGACGGGCCTGCGGGCACGACGGGACTGGGTGAAATATG
GCCTGGTAGCAACAGTCTTGGTGCTTGCCTCACCTTATGTCTATCCACAC
TGCGGGGGCAATTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008032-T1.utr5p1 | KJC3_008032-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008032-T1.utr3p1 | KJC3_008032-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.6 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR013744 |
| DBxref | PFAM:PF08538 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:747827..749673 + |
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