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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1105045..1107432+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008148-T1 ID=KJC3_008148-T1|Name=KJC3_008148-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2388bp|location=Sequence derived from alignment at ch6:1105045..1107432+ (Aspergillus niger KJC3)
GTGAGGGCCCGATAAGCTCCCGCGGCTCTCTCTGCATGTGCTTCTCGGAC
TTACCAGCCAACCGAGCTACTTGCTTTCTTCTTCCCTGAGTTGGCCTTCT
GCCATCAGATATGCACCCTCGCCTCATGCGACTCGCATCATCTTGGATGG
GACATCATGGAAGATCACACTACGGACGCCCTCGTCAATCGTGACGAGCC
TGTCCCGGTCATCGCCGCTGGGAAGCACAATGACGATGCCGAAAGATCAA
AACCTGGGGTATTGAAGAGATCAGTGTCCAAGGCCGGTCGCTCTCTACAA
GATAGGATTCTCTCCAAGTAGGCAACTATAAATATCCCCTTCTTATATTA
ATGTCGCATGAATCGCCTTGGCTGACTGGGTCCGTTTCAGGATCTTGGAG
CAAGTTATGCCCGTCGAAGACGTCGATGCTGAATCAGTGTCAGTCGGCGA
CAAGCCAATTCCCATCGACAGTAAACGGCCGGCGTTTAGTCTACCTCTGA
TGGCCAACAATTTCCGTCGGTTTAATGCAAGGTGAAAAAACACTCTTCCC
AGTATCTGGCTACTTCAAATGCTGATGTATTTGGTAGGATTGGCATTGTT
TTTCTGTTTCAAACCCGTGTGGAGCGTCTGCTCAGTTGGAAACAGACCTC
TCACACAGTCTCCTTTCTCTTCGTATATTCCTTCATATGCTTAGATCCCC
ATCTTCTTGTCATTATTCCGTTCGCCGTACTCTTGTTCTTTGTTATGGTA
CCTGCGTTCCTCGCACGCCACCCTCCACCTCCCTCGACGTCCACTTCCAG
CATCACCCCCTACTACTCATACGAAGGCCCAGCCCTTGCTCCTGCCAAAA
CCATTAAACCAGCGTCGGAGACGTCTAAGGATTTCTTTCGGAATATGAGA
GACTTGCAAAACTGCATGGCAGATTATTCCGATGTACATGATGCGACAGT
GTCCGCGTTTGCGCCCTTGACAAACTTCTCGAATGAGAAACTATCATCGA
CAGTATTTCTTACATGCACGCTCATGGCAGCTCTATTATTCTTAACCGCT
CACCTTCTCCCGTGGCGACTGATTTTCCTTGTTGGTGGCAATGCAGCCAT
TTTGTCAATGCACCCAAGCTTTCCAGATCTAGTACAGAGTCTTGCAGAGG
ATATGTTGGATAACACAGCGGAAGAAGGTCCGGCGGCTGATAAAAAGGGC
CAGGAATCTTTCAACCTTGGGGGTCTGGCCATGCCTGCTTCGCCCTCAAA
AGCCGTGTCTTTAATGGAATCACTGGCCAATATCTCCTTGGACTCCTCCC
CAGAGGAGCGGGAGGTTGAGGTATTCGAGATCCAATACCGCTCCCTTGCT
CCTTACTCGGAATCTCAATGGGAACATTTTCTGTTCAGTCCTATGCCATA
CGATCCGCTCTCTCCCTCACGCATTGCCGGTGATCGTCCCAAGGGTTGTC
GATTCTTCGAGGATGTCCAACCCCCGTCTGGATGGGCGTGGAAAGGCAAG
AAGTGGGAATTAGATTTAGACTGTCGCGAGTGGGTTGTGGAGCGCATGAT
CACCGGAGTTGGCTTCGAGGTCTCCGGCAGTCCATCGGAAAGTGGCATGA
CCAGTGGTGAGATTGGGGGTTGGGTCTGGGACCTGCCTCCAGCCTCCAGC
AGATATGAGGAGGCAGTGTCTACGCTAGCATATGATGTCCTAGACTCGAT
AAACCCATCAAAAGGACATGATTGGAAAGGCAGAAAGAAAGGGAAAGAAA
GGGTCTCCCAAGATTACGAGGAGAAGGTGCACACCGGATCCCATGTAACG
GGGGAATGGAGAAGGAGACGATGGATTCGCATCGTGCACCGTGTTAGTTT
ACCGGCTGCCGATAAGTACGATCAAGCAGCTGACGACGATACCAACGATA
CCTGAGGACATGTACGATTGAAGAACGATACTGGAGATGAGATGTATCCA
CCAAATTTGGATGGCATTCAGATCAACATCGTACATGCCCCGAAGAGCAT
CAAGCAAGTGGACATGTATAATCCGACCCACGCTAACCAAGTTGCAATCA
CAGCAGTCTCGAGGCCCACCCTGATACCGTACGATTACCATGCTTGTGGC
AACCAGGCTCCACAGTGTTGATGGATTCGCTTCGGGCACTATCGGACACT
TATCAATTGTTTTTCTTTATTTTTTTTTATCACCTTCTTCTACACAGTGC
AGGTTATTCATCGGAGACCCAAGGTAGACTTCACCTTGCTAAAATACCAC
CTCACTGTTGAAGATAAAACTTGAGTCCCTGTAAAGACTTCTTTCGTAGT
AATAGTAGCCATGTGAAACGACCAGATGCTGGCACTTATGTGGGGAAGTG
CCGCATCCGGTAAGTACTGCCTAAGGCAGCAGCGTATG back to topCoding sequence (CDS) from alignment at ch6:1105045..1107432+ >KJC3_008148-T1 ID=KJC3_008148-T1|Name=KJC3_008148-T1|organism=Aspergillus niger KJC3|type=CDS|length=4860bp|location=Sequence derived from alignment at ch6:1105045..1107432+ (Aspergillus niger KJC3)
ATGGAAGATCACACTACGGACGCCCTCGTCAATCGTGACGAGCCTGTCCC
GGTCATCGCCGCTGGGAAGCACAATGACGATGCCGAAAGATCAAAACCTG
GGGTATTGAAGAGATCAGTGTCCAAGGCCGGTCGCTCTCTACAAGATAGG
ATTCTCTCCAAGATCTTGGAGCAAGTTATGCCCGTCGAAGACGTCGATGC
TGAATCAGTGTCAGTCGGCGACAAGCCAATTCCCATCGACAGTAAACGGC
CGGCGTTTAGTCTACCTCTGATGGCCAACAATTTCCGTCGGTTTAATGCA
AGGATTGGCATTGTTTTTCTGTTTCAAACCCGTGTGGAGCGTCTGCTCAG
TTGGAAACAGACCTCTCACACAGTCTCCTTTCTCTTCGTATATTCCTTCA
TATGCTTAGATCCCCATCTTCTTGTCATTATTCCGTTCGCCGTACTCTTG
TTCTTTGTTATGGTACCTGCGTTCCTCGCACGCCACCCTCCACCTCCCTC
GACGTCCACTTCCAGCATCACCCCCTACTACTCATACGAAGGCCCAGCCC
TTGCTCCTGCCAAAACCATTAAACCAGCGTCGGAGACGTCTAAGGATTTC
TTTCGGAATATGAGAGACTTGCAAAACTGCATGGCAGATTATTCCGATGT
ACATGATGCGACAGTGTCCGCGTTTGCGCCCTTGACAAACTTCTCGAATG
AGAAACTATCATCGACAGTATTTCTTACATGCACGCTCATGGCAGCTCTA
TTATTCTTAACCGCTCACCTTCTCCCGTGGCGACTGATTTTCCTTGTTGG
TGGCAATGCAGCCATTTTGTCAATGCACCCAAGCTTTCCAGATCTAGTAC
AGAGTCTTGCAGAGGATATGTTGGATAACACAGCGGAAGAAGGTCCGGCG
GCTGATAAAAAGGGCCAGGAATCTTTCAACCTTGGGGGTCTGGCCATGCC
TGCTTCGCCCTCAAAAGCCGTGTCTTTAATGGAATCACTGGCCAATATCT
CCTTGGACTCCTCCCCAGAGGAGCGGGAGGTTGAGGTATTCGAGATCCAA
TACCGCTCCCTTGCTCCTTACTCGGAATCTCAATGGGAACATTTTCTGTT
CAGTCCTATGCCATACGATCCGCTCTCTCCCTCACGCATTGCCGGTGATC
GTCCCAAGGGTTGTCGATTCTTCGAGGATGTCCAACCCCCGTCTGGATGG
GCGTGGAAAGGCAAGAAGTGGGAATTAGATTTAGACTGTCGCGAGTGGGT
TGTGGAGCGCATGATCACCGGAGTTGGCTTCGAGGTCTCCGGCAGTCCAT
CGGAAAGTGGCATGACCAGTGGTGAGATTGGGGGTTGGGTCTGGGACCTG
CCTCCAGCCTCCAGCAGATATGAGGAGGCAGTGTCTACGCTAGCATATGA
TGTCCTAGACTCGATAAACCCATCAAAAGGACATGATTGGAAAGGCAGAA
AGAAAGGGAAAGAAAGGGTCTCCCAAGATTACGAGGAGAAGGTGCACACC
GGATCCCATGTAACGGGGGAATGGAGAAGGAGACGATGGATTCGCATCGT
GCACCGTGTTAGTTTACCGGCTGCCGATAAGTACGATCAAGCAGCTGACG
ACGATACCAACGATACCTGAATGGAAGATCACACTACGGACGCCCTCGTC
AATCGTGACGAGCCTGTCCCGGTCATCGCCGCTGGGAAGCACAATGACGA
TGCCGAAAGATCAAAACCTGGGGTATTGAAGAGATCAGTGTCCAAGGCCG
GTCGCTCTCTACAAGATAGGATTCTCTCCAAGATCTTGGAGCAAGTTATG
CCCGTCGAAGACGTCGATGCTGAATCAGTGTCAGTCGGCGACAAGCCAAT
TCCCATCGACAGTAAACGGCCGGCGTTTAGTCTACCTCTGATGGCCAACA
ATTTCCGTCGGTTTAATGCAAGGATTGGCATTGTTTTTCTGTTTCAAACC
CGTGTGGAGCGTCTGCTCAGTTGGAAACAGACCTCTCACACAGTCTCCTT
TCTCTTCGTATATTCCTTCATATGCTTAGATCCCCATCTTCTTGTCATTA
TTCCGTTCGCCGTACTCTTGTTCTTTGTTATGGTACCTGCGTTCCTCGCA
CGCCACCCTCCACCTCCCTCGACGTCCACTTCCAGCATCACCCCCTACTA
CTCATACGAAGGCCCAGCCCTTGCTCCTGCCAAAACCATTAAACCAGCGT
CGGAGACGTCTAAGGATTTCTTTCGGAATATGAGAGACTTGCAAAACTGC
ATGGCAGATTATTCCGATGTACATGATGCGACAGTGTCCGCGTTTGCGCC
CTTGACAAACTTCTCGAATGAGAAACTATCATCGACAGTATTTCTTACAT
GCACGCTCATGGCAGCTCTATTATTCTTAACCGCTCACCTTCTCCCGTGG
CGACTGATTTTCCTTGTTGGTGGCAATGCAGCCATTTTGTCAATGCACCC
AAGCTTTCCAGATCTAGTACAGAGTCTTGCAGAGGATATGTTGGATAACA
CAGCGGAAGAAGGTCCGGCGGCTGATAAAAAGGGCCAGGAATCTTTCAAC
CTTGGGGGTCTGGCCATGCCTGCTTCGCCCTCAAAAGCCGTGTCTTTAAT
GGAATCACTGGCCAATATCTCCTTGGACTCCTCCCCAGAGGAGCGGGAGG
TTGAGGTATTCGAGATCCAATACCGCTCCCTTGCTCCTTACTCGGAATCT
CAATGGGAACATTTTCTGTTCAGTCCTATGCCATACGATCCGCTCTCTCC
CTCACGCATTGCCGGTGATCGTCCCAAGGGTTGTCGATTCTTCGAGGATG
TCCAACCCCCGTCTGGATGGGCGTGGAAAGGCAAGAAGTGGGAATTAGAT
TTAGACTGTCGCGAGTGGGTTGTGGAGCGCATGATCACCGGAGTTGGCTT
CGAGGTCTCCGGCAGTCCATCGGAAAGTGGCATGACCAGTGGTGAGATTG
GGGGTTGGGTCTGGGACCTGCCTCCAGCCTCCAGCAGATATGAGGAGGCA
GTGTCTACGCTAGCATATGATGTCCTAGACTCGATAAACCCATCAAAAGG
ACATGATTGGAAAGGCAGAAAGAAAGGGAAAGAAAGGGTCTCCCAAGATT
ACGAGGAGAAGGTGCACACCGGATCCCATGTAACGGGGGAATGGAGAAGG
AGACGATGGATTCGCATCGTGCACCGTGTTAGTTTACCGGCTGCCGATAA
GTACGATCAAGCAGCTGACGACGATACCAACGATACCTGAATGGAAGATC
ACACTACGGACGCCCTCGTCAATCGTGACGAGCCTGTCCCGGTCATCGCC
GCTGGGAAGCACAATGACGATGCCGAAAGATCAAAACCTGGGGTATTGAA
GAGATCAGTGTCCAAGGCCGGTCGCTCTCTACAAGATAGGATTCTCTCCA
AGATCTTGGAGCAAGTTATGCCCGTCGAAGACGTCGATGCTGAATCAGTG
TCAGTCGGCGACAAGCCAATTCCCATCGACAGTAAACGGCCGGCGTTTAG
TCTACCTCTGATGGCCAACAATTTCCGTCGGTTTAATGCAAGGATTGGCA
TTGTTTTTCTGTTTCAAACCCGTGTGGAGCGTCTGCTCAGTTGGAAACAG
ACCTCTCACACAGTCTCCTTTCTCTTCGTATATTCCTTCATATGCTTAGA
TCCCCATCTTCTTGTCATTATTCCGTTCGCCGTACTCTTGTTCTTTGTTA
TGGTACCTGCGTTCCTCGCACGCCACCCTCCACCTCCCTCGACGTCCACT
TCCAGCATCACCCCCTACTACTCATACGAAGGCCCAGCCCTTGCTCCTGC
CAAAACCATTAAACCAGCGTCGGAGACGTCTAAGGATTTCTTTCGGAATA
TGAGAGACTTGCAAAACTGCATGGCAGATTATTCCGATGTACATGATGCG
ACAGTGTCCGCGTTTGCGCCCTTGACAAACTTCTCGAATGAGAAACTATC
ATCGACAGTATTTCTTACATGCACGCTCATGGCAGCTCTATTATTCTTAA
CCGCTCACCTTCTCCCGTGGCGACTGATTTTCCTTGTTGGTGGCAATGCA
GCCATTTTGTCAATGCACCCAAGCTTTCCAGATCTAGTACAGAGTCTTGC
AGAGGATATGTTGGATAACACAGCGGAAGAAGGTCCGGCGGCTGATAAAA
AGGGCCAGGAATCTTTCAACCTTGGGGGTCTGGCCATGCCTGCTTCGCCC
TCAAAAGCCGTGTCTTTAATGGAATCACTGGCCAATATCTCCTTGGACTC
CTCCCCAGAGGAGCGGGAGGTTGAGGTATTCGAGATCCAATACCGCTCCC
TTGCTCCTTACTCGGAATCTCAATGGGAACATTTTCTGTTCAGTCCTATG
CCATACGATCCGCTCTCTCCCTCACGCATTGCCGGTGATCGTCCCAAGGG
TTGTCGATTCTTCGAGGATGTCCAACCCCCGTCTGGATGGGCGTGGAAAG
GCAAGAAGTGGGAATTAGATTTAGACTGTCGCGAGTGGGTTGTGGAGCGC
ATGATCACCGGAGTTGGCTTCGAGGTCTCCGGCAGTCCATCGGAAAGTGG
CATGACCAGTGGTGAGATTGGGGGTTGGGTCTGGGACCTGCCTCCAGCCT
CCAGCAGATATGAGGAGGCAGTGTCTACGCTAGCATATGATGTCCTAGAC
TCGATAAACCCATCAAAAGGACATGATTGGAAAGGCAGAAAGAAAGGGAA
AGAAAGGGTCTCCCAAGATTACGAGGAGAAGGTGCACACCGGATCCCATG
TAACGGGGGAATGGAGAAGGAGACGATGGATTCGCATCGTGCACCGTGTT
AGTTTACCGGCTGCCGATAAGTACGATCAAGCAGCTGACGACGATACCAA
CGATACCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008148-T1.utr5p1 | KJC3_008148-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010482 |
| DBxref | PFAM:PF06398 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1105045..1107432 + |
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