You are here

Home

KJC3_008205-T1, KJC3_008205-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008205-T1
Unique NameKJC3_008205-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1258479..1259434-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008205-T1 ID=KJC3_008205-T1|Name=KJC3_008205-T1|organism=Aspergillus niger KJC3|type=mRNA|length=956bp|location=Sequence derived from alignment at ch6:1258479..1259434- (Aspergillus niger KJC3)
TGGACTTGCTGCAACCCGCTCGAATCGTCGAAATTGTCGGACGGTGATGT
CATGGCATTATTCAGCATGGTGGGGTTGCATTAATTCACTTTTAAGCTCG
TGTCGCAGCTCCGGGCAGGCTGGCGATTAGGAGCATCCTGGGTTCACTTG
ATATAAGTCAAAATCTTCAAAAATGGCCAATAATAAGGTTGACGTCACTA
GATCCTCGGACTTGGACGAGGCAACGGGTATGTCAAGCCTTTCTGCAAGA
GATCCGAGGACAGTATCATGACCATAACATTGGATAGGGGGACGGACGGA
GGGAATGGTTCGGAAGGGAGCTATCATCGACAAGTCGGATCAGTTGTGCG
CACTAGGTTGGTTGAGTCCCTTTGCCAGGGGTTGAATGTTTCTAATACAA
CTTCTGCCAGTCATGTGCGCCGAGCCACATTCCTGCTCAGCTGTTCACCA
TCACGGCGAGCAGGATACCGTGGTTTACGCCGCAAAGGGCCACGGTTCCA
TTGTCTTCGATGGGGGAAAGCAGCGCAAAGACCTCTCCCCGGGTGACTTT
GCTATCATTCCTGCGTAAGTAGTAAGGCACTAACTAATATAAGTTCGTGA
ACTGACTCGGAGCCTACCTGTGTGCAGCTACACGGAACACCAGGAGATGA
ACCAATCAGATGAAGATGTTGAATGGGTGATCACCAGAGCAGGACGCAAG
CCCATCACAGTCAACCTGCAAGGTTGGTCTAATACTTCTAGCTGAGGGCT
GGACCTTACCCGTTGATGCACCGTGGGTGCTTTGTGTGTTAGTTGTATAC
ATTAGCGGATGCTTTCACCTTTGCGTCTTCAGACCTTTGTAGCAATCCAG
ACATTCCTATACAACCTCATTGATGGGCCACTTCGCGCCTGGGATTGTTA
AAAGCTTTTTACGTCTTGGTACTCCCAGATCATATGTAGCCCTTGATGAA
CAGAAC
back to top

Coding sequence (CDS) from alignment at ch6:1258479..1259434-

>KJC3_008205-T1 ID=KJC3_008205-T1|Name=KJC3_008205-T1|organism=Aspergillus niger KJC3|type=CDS|length=1584bp|location=Sequence derived from alignment at ch6:1258479..1259434- (Aspergillus niger KJC3)
CTACACGGAACACCAGGAGATGAACCAATCAGATGAAGATGTTGAATGGG
TGATCACCAGAGCAGGACGCAAGCCCATCACAGTCAACCTGCAAGGTTGG
TCTAATACTTCTAGCTGATCATGTGCGCCGAGCCACATTCCTGCTCAGCT
GTTCACCATCACGGCGAGCAGGATACCGTGGTTTACGCCGCAAAGGGCCA
CGGTTCCATTGTCTTCGATGGGGGAAAGCAGCGCAAAGACCTCTCCCCGG
GTGACTTTGCTATCATTCCTGCGGGGACGGACGGAGGGAATGGTTCGGAA
GGGAGCTATCATCGACAAGTCGGATCAGTTGTGCGCACTAGATGGCCAAT
AATAAGGTTGACGTCACTAGATCCTCGGACTTGGACGAGGCAACGGCTAC
ACGGAACACCAGGAGATGAACCAATCAGATGAAGATGTTGAATGGGTGAT
CACCAGAGCAGGACGCAAGCCCATCACAGTCAACCTGCAAGGTTGGTCTA
ATACTTCTAGCTGATCATGTGCGCCGAGCCACATTCCTGCTCAGCTGTTC
ACCATCACGGCGAGCAGGATACCGTGGTTTACGCCGCAAAGGGCCACGGT
TCCATTGTCTTCGATGGGGGAAAGCAGCGCAAAGACCTCTCCCCGGGTGA
CTTTGCTATCATTCCTGCGGGGACGGACGGAGGGAATGGTTCGGAAGGGA
GCTATCATCGACAAGTCGGATCAGTTGTGCGCACTAGATGGCCAATAATA
AGGTTGACGTCACTAGATCCTCGGACTTGGACGAGGCAACGGCTACACGG
AACACCAGGAGATGAACCAATCAGATGAAGATGTTGAATGGGTGATCACC
AGAGCAGGACGCAAGCCCATCACAGTCAACCTGCAAGGTTGGTCTAATAC
TTCTAGCTGATCATGTGCGCCGAGCCACATTCCTGCTCAGCTGTTCACCA
TCACGGCGAGCAGGATACCGTGGTTTACGCCGCAAAGGGCCACGGTTCCA
TTGTCTTCGATGGGGGAAAGCAGCGCAAAGACCTCTCCCCGGGTGACTTT
GCTATCATTCCTGCGGGGACGGACGGAGGGAATGGTTCGGAAGGGAGCTA
TCATCGACAAGTCGGATCAGTTGTGCGCACTAGATGGCCAATAATAAGGT
TGACGTCACTAGATCCTCGGACTTGGACGAGGCAACGGCTACACGGAACA
CCAGGAGATGAACCAATCAGATGAAGATGTTGAATGGGTGATCACCAGAG
CAGGACGCAAGCCCATCACAGTCAACCTGCAAGGTTGGTCTAATACTTCT
AGCTGATCATGTGCGCCGAGCCACATTCCTGCTCAGCTGTTCACCATCAC
GGCGAGCAGGATACCGTGGTTTACGCCGCAAAGGGCCACGGTTCCATTGT
CTTCGATGGGGGAAAGCAGCGCAAAGACCTCTCCCCGGGTGACTTTGCTA
TCATTCCTGCGGGGACGGACGGAGGGAATGGTTCGGAAGGGAGCTATCAT
CGACAAGTCGGATCAGTTGTGCGCACTAGATGGCCAATAATAAGGTTGAC
GTCACTAGATCCTCGGACTTGGACGAGGCAACGG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008205KJC3_008205Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008205-T1KJC3_008205-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008205-T1.cdsKJC3_008205-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008205-T1.utr3p1KJC3_008205-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008205-T1.exon4KJC3_008205-T1.exon4Aspergillus niger KJC3exon
KJC3_008205-T1.exon3KJC3_008205-T1.exon3Aspergillus niger KJC3exon
KJC3_008205-T1.exon2KJC3_008205-T1.exon2Aspergillus niger KJC3exon
KJC3_008205-T1.exon1KJC3_008205-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008205-T1.utr5p1KJC3_008205-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_6.10
DBxrefInterPro:IPR011051
DBxrefInterPro:IPR014710
DBxrefInterPro:IPR013096
DBxrefPFAM:PF07883
DBxrefPFAM:PF00190
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1258479..1259434 -
Powered by Drupal